RNA–Protein interactions for RNA: ENST00000522006.5

LAMA4-219, Transcript of laminin subunit alpha 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LAMA4, Length 6,438 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-219ENST00000522006 USP24Q9UPU5 2620 aa6.96□□□□□ -1.3
LAMA4-219ENST00000522006 LINC00472Q9H8W2 130 aa6.94□□□□□ -1.3
LAMA4-219ENST00000522006 MGAM2Q2M2H8 2515 aa6.94□□□□□ -1.3
LAMA4-219ENST00000522006 MKI67P46013 3256 aaKnown RBP6.92□□□□□ -1.3
LAMA4-219ENST00000522006 BPTFQ12830 3046 aa6.92□□□□□ -1.3
LAMA4-219ENST00000522006 LAMA3Q16787 3333 aa6.92□□□□□ -1.3
LAMA4-219ENST00000522006 OXTP01178 125 aa6.91□□□□□ -1.3
LAMA4-219ENST00000522006 FLNAP21333 2647 aaKnown RBP6.9□□□□□ -1.3
LAMA4-219ENST00000522006 SPRR1BP22528 89 aa6.9□□□□□ -1.31
LAMA4-219ENST00000522006 A0A0A0MQY5 61 aa6.89□□□□□ -1.31
LAMA4-219ENST00000522006 R4GN34 69 aa6.88□□□□□ -1.31
LAMA4-219ENST00000522006 ITPR3Q14573 2671 aa6.88□□□□□ -1.31
LAMA4-219ENST00000522006 KRTAP26-1Q6PEX3 210 aa6.87□□□□□ -1.31
LAMA4-219ENST00000522006 HELZ2Q9BYK8 2649 aaKnown RBP6.86□□□□□ -1.31
LAMA4-219ENST00000522006 BRCA2P51587 3418 aa6.86□□□□□ -1.31
LAMA4-219ENST00000522006 ROMO1P60602 79 aa6.85□□□□□ -1.31
LAMA4-219ENST00000522006 TRANK1O15050 2925 aa6.85□□□□□ -1.31
LAMA4-219ENST00000522006 CENPEQ02224 2701 aa6.84□□□□□ -1.31
LAMA4-219ENST00000522006 RPL37P61927 97 aaKnown RBP6.83□□□□□ -1.32
LAMA4-219ENST00000522006 CFAP46Q8IYW2 2715 aa6.82□□□□□ -1.32
LAMA4-219ENST00000522006 H1FX-AS1Q4G0G2 97 aa6.82□□□□□ -1.32
LAMA4-219ENST00000522006 ATRQ13535 2644 aa6.81□□□□□ -1.32
LAMA4-219ENST00000522006 KRTAP1-5Q9BYS1 174 aa6.8□□□□□ -1.32
LAMA4-219ENST00000522006 MGAQ8IWI9 3026 aa6.79□□□□□ -1.32
LAMA4-219ENST00000522006 CFAP54Q96N23 3096 aa6.78□□□□□ -1.32
LAMA4-219ENST00000522006 M0QZ58 72 aa6.77□□□□□ -1.32
LAMA4-219ENST00000522006 SEC61BP60468 96 aaKnown RBP6.77□□□□□ -1.32
LAMA4-219ENST00000522006 MAST4O15021 2626 aa6.77□□□□□ -1.33
LAMA4-219ENST00000522006 PRUNE2Q8WUY3 3088 aa6.77□□□□□ -1.33
LAMA4-219ENST00000522006 Q5VSD8 79 aa6.76□□□□□ -1.33
LAMA4-219ENST00000522006 LAMA2P24043 3122 aaKnown RBP6.75□□□□□ -1.33
LAMA4-219ENST00000522006 ZNF292O60281 2723 aa6.75□□□□□ -1.33
LAMA4-219ENST00000522006 Q6ZR54 194 aa6.75□□□□□ -1.33
LAMA4-219ENST00000522006 SPATA8Q6RVD6 105 aa6.74□□□□□ -1.33
LAMA4-219ENST00000522006 KRTAP10-1P60331 282 aa6.73□□□□□ -1.33
LAMA4-219ENST00000522006 ASB16-AS1Q495Z4 193 aa6.73□□□□□ -1.33
LAMA4-219ENST00000522006 ADM2Q7Z4H4 148 aa6.73□□□□□ -1.33
LAMA4-219ENST00000522006 WDFY4Q6ZS81 3184 aa6.72□□□□□ -1.33
LAMA4-219ENST00000522006 KRTAP10-2P60368 255 aa6.71□□□□□ -1.34
LAMA4-219ENST00000522006 UNC80Q8N2C7 3258 aa6.71□□□□□ -1.34
LAMA4-219ENST00000522006 A0A0C4DFX4 3053 aa6.7□□□□□ -1.34
LAMA4-219ENST00000522006 KRTAP29-1A8MX34 341 aaPredicted RBP6.68□□□□□ -1.34
LAMA4-219ENST00000522006 KRTAP4-16G5E9R7 235 aaPredicted RBP6.67□□□□□ -1.34
LAMA4-219ENST00000522006 XIRP2A4UGR9 3374 aa6.66□□□□□ -1.34
LAMA4-219ENST00000522006 PANO1I0J062 215 aa6.65□□□□□ -1.34
LAMA4-219ENST00000522006 PLAC4Q8WY50 150 aa6.65□□□□□ -1.34
LAMA4-219ENST00000522006 AKAP13Q12802 2813 aa6.63□□□□□ -1.35
LAMA4-219ENST00000522006 KRTAP16-1A8MUX0 517 aa6.62□□□□□ -1.35
LAMA4-219ENST00000522006 CDH23Q9H251 3354 aa6.61□□□□□ -1.35
LAMA4-219ENST00000522006 DSPP15924 2871 aaKnown RBP6.61□□□□□ -1.35
LAMA4-219ENST00000522006 LCE6AA0A183 80 aa6.61□□□□□ -1.35
LAMA4-219ENST00000522006 TEP1Q99973 2627 aaKnown RBP6.61□□□□□ -1.35
LAMA4-219ENST00000522006 A0A087X002 238 aa6.6□□□□□ -1.35
LAMA4-219ENST00000522006 A6NN06 94 aa6.6□□□□□ -1.35
LAMA4-219ENST00000522006 NOTCH2NLQ7Z3S9 236 aa6.6□□□□□ -1.35
LAMA4-219ENST00000522006 TRIOO75962 3097 aa6.6□□□□□ -1.35
LAMA4-219ENST00000522006 CHD6Q8TD26 2715 aa6.59□□□□□ -1.35
LAMA4-219ENST00000522006 TEX15Q9BXT5 2789 aa6.58□□□□□ -1.36
LAMA4-219ENST00000522006 VPS13AQ96RL7 3174 aa6.56□□□□□ -1.36
LAMA4-219ENST00000522006 KRTAP25-1Q3LHN0 102 aa6.55□□□□□ -1.36
LAMA4-219ENST00000522006 A8MU10 97 aa6.54□□□□□ -1.36
LAMA4-219ENST00000522006 MAP1AP78559 2803 aaPredicted RBP6.53□□□□□ -1.36
LAMA4-219ENST00000522006 IGSF10Q6WRI0 2623 aa6.51□□□□□ -1.37
LAMA4-219ENST00000522006 KRTAP11-1Q8IUC1 163 aa6.5□□□□□ -1.37
LAMA4-219ENST00000522006 COL6A5A8TX70 2615 aa6.5□□□□□ -1.37
LAMA4-219ENST00000522006 SETXQ7Z333 2677 aaKnown RBP6.49□□□□□ -1.37
LAMA4-219ENST00000522006 UNC79Q9P2D8 2635 aa6.48□□□□□ -1.37
LAMA4-219ENST00000522006 STAB1Q9NY15 2570 aa6.48□□□□□ -1.37
LAMA4-219ENST00000522006 C20orf166-AS1Q96NR2 134 aa6.48□□□□□ -1.37
LAMA4-219ENST00000522006 A8MUU9 505 aa6.47□□□□□ -1.37
LAMA4-219ENST00000522006 SZT2Q5T011 3432 aa6.47□□□□□ -1.37
LAMA4-219ENST00000522006 FRYQ5TBA9 3013 aa6.46□□□□□ -1.38
LAMA4-219ENST00000522006 RPS29P62273 56 aaKnown RBP6.46□□□□□ -1.38
LAMA4-219ENST00000522006 GCN1Q92616 2671 aaKnown RBP6.45□□□□□ -1.38
LAMA4-219ENST00000522006 CELSR3Q9NYQ7 3312 aa6.45□□□□□ -1.38
LAMA4-219ENST00000522006 NOTCH1P46531 2555 aa6.43□□□□□ -1.38
LAMA4-219ENST00000522006 KRTAP7-1Q8IUC3 87 aa6.42□□□□□ -1.38
LAMA4-219ENST00000522006 LAMA1P25391 3075 aa6.4□□□□□ -1.38
LAMA4-219ENST00000522006 VCANP13611 3396 aa6.39□□□□□ -1.39
LAMA4-219ENST00000522006 Q6ZRN7 208 aaPredicted RBP6.39□□□□□ -1.39
LAMA4-219ENST00000522006 NDUFAF8A1L188 74 aa6.38□□□□□ -1.39
LAMA4-219ENST00000522006 KRTAP13-2Q52LG2 175 aa6.38□□□□□ -1.39
LAMA4-219ENST00000522006 UBR5O95071 2799 aaPredicted RBP6.38□□□□□ -1.39
LAMA4-219ENST00000522006 NBEAL2Q6ZNJ1 2754 aa6.37□□□□□ -1.39
LAMA4-219ENST00000522006 BAHCC1Q9P281 2608 aa6.37□□□□□ -1.39
LAMA4-219ENST00000522006 NBEAL1Q6ZS30 2694 aa6.36□□□□□ -1.39
LAMA4-219ENST00000522006 DNAH14Q0VDD8 3507 aa6.35□□□□□ -1.39
LAMA4-219ENST00000522006 KRTAP13-1Q8IUC0 172 aa6.34□□□□□ -1.39
LAMA4-219ENST00000522006 ATMQ13315 3056 aa6.33□□□□□ -1.4
LAMA4-219ENST00000522006 FRYLO94915 3013 aa6.3□□□□□ -1.4
LAMA4-219ENST00000522006 FREM2Q5SZK8 3169 aa6.3□□□□□ -1.4
LAMA4-219ENST00000522006 FLNCQ14315 2725 aa6.3□□□□□ -1.4
LAMA4-219ENST00000522006 ITPR1Q14643 2758 aa6.29□□□□□ -1.4
LAMA4-219ENST00000522006 C10orf95Q9H7T3 257 aa6.29□□□□□ -1.4
LAMA4-219ENST00000522006 TNP1P09430 55 aa6.28□□□□□ -1.4
LAMA4-219ENST00000522006 BOD1L1Q8NFC6 3051 aa6.28□□□□□ -1.4
LAMA4-219ENST00000522006 COL12A1Q99715 3063 aa6.28□□□□□ -1.4
LAMA4-219ENST00000522006 KALRNO60229 2985 aa6.27□□□□□ -1.4
LAMA4-219ENST00000522006 TACC2O95359 2948 aa6.27□□□□□ -1.41
LAMA4-219ENST00000522006 ITPR2Q14571 2701 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 276.5 ms