RNA–Protein interactions for RNA: ENST00000521932.1

VPS13B-210, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 1,055 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-210ENST00000521932 VAMP3Q15836 100 aa4.98□□□□□ -1.61
VPS13B-210ENST00000521932 NHP2Q9NX24 153 aaKnown RBP4.98□□□□□ -1.61
VPS13B-210ENST00000521932 DHRS4-AS1Q9P1J3 65 aa4.98□□□□□ -1.61
VPS13B-210ENST00000521932 ERC2-IT1O76042 136 aa4.97□□□□□ -1.61
VPS13B-210ENST00000521932 FLG2Q5D862 2391 aaPredicted RBP4.96□□□□□ -1.62
VPS13B-210ENST00000521932 M0R143 59 aa4.96□□□□□ -1.62
VPS13B-210ENST00000521932 KRTAP10-8P60410 259 aa4.96□□□□□ -1.62
VPS13B-210ENST00000521932 SPRR4Q96PI1 79 aa4.96□□□□□ -1.62
VPS13B-210ENST00000521932 ZNF706Q9Y5V0 76 aaPredicted RBP4.96□□□□□ -1.62
VPS13B-210ENST00000521932 MT1HL1P0DM35 61 aa4.95□□□□□ -1.62
VPS13B-210ENST00000521932 FAM229BQ4G0N7 80 aa4.95□□□□□ -1.62
VPS13B-210ENST00000521932 LINC00483Q53H64 154 aa4.95□□□□□ -1.62
VPS13B-210ENST00000521932 LINC00575Q6W349 94 aa4.95□□□□□ -1.62
VPS13B-210ENST00000521932 H0YGX0 51 aa4.94□□□□□ -1.62
VPS13B-210ENST00000521932 H7C2G1 150 aa4.94□□□□□ -1.62
VPS13B-210ENST00000521932 K7ERJ3 54 aa4.94□□□□□ -1.62
VPS13B-210ENST00000521932 ANAPC11Q9NYG5 84 aa4.94□□□□□ -1.62
VPS13B-210ENST00000521932 A0A087X002 238 aa4.93□□□□□ -1.62
VPS13B-210ENST00000521932 hADV29S1A0JD25 119 aa4.93□□□□□ -1.62
VPS13B-210ENST00000521932 CRYGAP11844 174 aa4.93□□□□□ -1.62
VPS13B-210ENST00000521932 SPRR1BP22528 89 aa4.93□□□□□ -1.62
VPS13B-210ENST00000521932 Q1RN00 199 aa4.93□□□□□ -1.62
VPS13B-210ENST00000521932 ST20-AS1Q8NBB2 130 aa4.93□□□□□ -1.62
VPS13B-210ENST00000521932 SLC25A20O43772 301 aa4.92□□□□□ -1.62
VPS13B-210ENST00000521932 TSPAN13O95857 204 aa4.92□□□□□ -1.62
VPS13B-210ENST00000521932 TNXBP22105 4242 aa4.92□□□□□ -1.62
VPS13B-210ENST00000521932 IGLV5-48A0A075B6I7 105 aa4.91□□□□□ -1.62
VPS13B-210ENST00000521932 A0A1B0GX51 115 aa4.91□□□□□ -1.62
VPS13B-210ENST00000521932 COX6CP09669 75 aa4.91□□□□□ -1.62
VPS13B-210ENST00000521932 LINC01547P58512 204 aaPredicted RBP4.91□□□□□ -1.62
VPS13B-210ENST00000521932 KRTAP13-2Q52LG2 175 aa4.91□□□□□ -1.62
VPS13B-210ENST00000521932 TEX49A0A1B0GTD5 131 aa4.9□□□□□ -1.63
VPS13B-210ENST00000521932 SNCGO76070 127 aa4.9□□□□□ -1.63
VPS13B-210ENST00000521932 PSMB2P49721 201 aa4.9□□□□□ -1.63
VPS13B-210ENST00000521932 FAM218AQ96MZ4 157 aa4.9□□□□□ -1.63
VPS13B-210ENST00000521932 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.89□□□□□ -1.63
VPS13B-210ENST00000521932 Q6ZQY7 126 aa4.89□□□□□ -1.63
VPS13B-210ENST00000521932 TYMSOSQ8TAI1 123 aa4.89□□□□□ -1.63
VPS13B-210ENST00000521932 Q8N377 158 aa4.88□□□□□ -1.63
VPS13B-210ENST00000521932 C3orf22Q8N5N4 141 aa4.88□□□□□ -1.63
VPS13B-210ENST00000521932 DEFB105AQ8NG35 78 aa4.88□□□□□ -1.63
VPS13B-210ENST00000521932 BATFQ16520 125 aa4.87□□□□□ -1.63
VPS13B-210ENST00000521932 OCIAD2Q56VL3 154 aa4.87□□□□□ -1.63
VPS13B-210ENST00000521932 SSBP3-AS1Q7Z2R9 100 aa4.87□□□□□ -1.63
VPS13B-210ENST00000521932 SMIM29Q86T20 159 aa4.87□□□□□ -1.63
VPS13B-210ENST00000521932 PPDPFLQ8WWR9 84 aa4.87□□□□□ -1.63
VPS13B-210ENST00000521932 CLEC2BQ92478 149 aa4.87□□□□□ -1.63
VPS13B-210ENST00000521932 SNHG12Q9BXW3 62 aa4.87□□□□□ -1.63
VPS13B-210ENST00000521932 LAMTOR3Q9UHA4 124 aa4.87□□□□□ -1.63
VPS13B-210ENST00000521932 SCGB1C2P0DMR2 95 aa4.86□□□□□ -1.63
VPS13B-210ENST00000521932 IGLV9-49A0A0B4J1Y8 123 aa4.85□□□□□ -1.63
VPS13B-210ENST00000521932 LST1O00453 97 aa4.85□□□□□ -1.63
VPS13B-210ENST00000521932 TAX1BP3O14907 124 aa4.85□□□□□ -1.63
VPS13B-210ENST00000521932 KRTAP2-2Q9BYT5 123 aa4.85□□□□□ -1.63
VPS13B-210ENST00000521932 HERC1Q15751 4861 aa4.84□□□□□ -1.63
VPS13B-210ENST00000521932 PCP4L1A6NKN8 68 aa4.84□□□□□ -1.63
VPS13B-210ENST00000521932 TRACP01848 142 aa4.84□□□□□ -1.63
VPS13B-210ENST00000521932 MOBPQ13875 183 aa4.84□□□□□ -1.63
VPS13B-210ENST00000521932 SPAG11AQ6PDA7 123 aa4.84□□□□□ -1.63
VPS13B-210ENST00000521932 H3BQ85 93 aa4.83□□□□□ -1.64
VPS13B-210ENST00000521932 H3BUT2 72 aa4.83□□□□□ -1.64
VPS13B-210ENST00000521932 DNAL4O96015 105 aa4.83□□□□□ -1.64
VPS13B-210ENST00000521932 Q8NBF4 154 aa4.83□□□□□ -1.64
VPS13B-210ENST00000521932 NAA38Q9BRA0 125 aaKnown RBP4.83□□□□□ -1.64
VPS13B-210ENST00000521932 IGLV8-61A0A075B6I0 122 aa4.82□□□□□ -1.64
VPS13B-210ENST00000521932 TRBV20-1A0A075B6N2 111 aa4.82□□□□□ -1.64
VPS13B-210ENST00000521932 TCL1BO95988 128 aa4.82□□□□□ -1.64
VPS13B-210ENST00000521932 COL5A1-AS1Q5SY13 56 aa4.82□□□□□ -1.64
VPS13B-210ENST00000521932 C9orf153Q5TBE3 101 aa4.82□□□□□ -1.64
VPS13B-210ENST00000521932 LYRM7Q5U5X0 104 aa4.82□□□□□ -1.64
VPS13B-210ENST00000521932 LINC00304Q8N9R0 145 aa4.82□□□□□ -1.64
VPS13B-210ENST00000521932 ORMDL1Q9P0S3 153 aa4.82□□□□□ -1.64
VPS13B-210ENST00000521932 DMBT1Q9UGM3 2413 aaPredicted RBP4.82□□□□□ -1.64
VPS13B-210ENST00000521932 A0A1W2PPM0 123 aa4.81□□□□□ -1.64
VPS13B-210ENST00000521932 TMEM256-PLSCR3K7ERE1 68 aa4.81□□□□□ -1.64
VPS13B-210ENST00000521932 SPINK1P00995 79 aa4.81□□□□□ -1.64
VPS13B-210ENST00000521932 ATXN8Q156A1 80 aa4.81□□□□□ -1.64
VPS13B-210ENST00000521932 NDUFV3P56181 108 aaKnown RBP4.8□□□□□ -1.64
VPS13B-210ENST00000521932 RPS29P62273 56 aaKnown RBP4.8□□□□□ -1.64
VPS13B-210ENST00000521932 F8WEM9 126 aa4.79□□□□□ -1.64
VPS13B-210ENST00000521932 CD164Q04900 197 aa4.79□□□□□ -1.64
VPS13B-210ENST00000521932 FABP2P12104 132 aa4.78□□□□□ -1.64
VPS13B-210ENST00000521932 Q6JHZ5 121 aa4.78□□□□□ -1.64
VPS13B-210ENST00000521932 H3BMG7 143 aa4.77□□□□□ -1.65
VPS13B-210ENST00000521932 BAALC-AS2P0C853 105 aa4.77□□□□□ -1.65
VPS13B-210ENST00000521932 IGFL1Q6UW32 110 aa4.77□□□□□ -1.65
VPS13B-210ENST00000521932 IGKV2D-30A0A075B6S6 120 aa4.75□□□□□ -1.65
VPS13B-210ENST00000521932 A0A0G2JQZ4 141 aa4.75□□□□□ -1.65
VPS13B-210ENST00000521932 Q5XG85 94 aa4.75□□□□□ -1.65
VPS13B-210ENST00000521932 Q6Q795 121 aa4.75□□□□□ -1.65
VPS13B-210ENST00000521932 HRCT1Q6UXD1 115 aa4.74□□□□□ -1.65
VPS13B-210ENST00000521932 ANKRD29Q8N6D5 301 aa4.74□□□□□ -1.65
VPS13B-210ENST00000521932 SPCS1Q9Y6A9 102 aa4.74□□□□□ -1.65
VPS13B-210ENST00000521932 HMCN2Q8NDA2 5059 aa4.73□□□□□ -1.65
VPS13B-210ENST00000521932 C9JAW5 83 aa4.73□□□□□ -1.65
VPS13B-210ENST00000521932 LIMD2Q9BT23 127 aa4.73□□□□□ -1.65
VPS13B-210ENST00000521932 TRBV7-4A0A0J9YYF1 115 aa4.72□□□□□ -1.65
VPS13B-210ENST00000521932 JMJD7-PLA2G4BH0Y9G9 81 aa4.72□□□□□ -1.65
VPS13B-210ENST00000521932 H3BT86 120 aa4.72□□□□□ -1.65
VPS13B-210ENST00000521932 RBM3P98179 157 aaKnown RBP4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms