RNA–Protein interactions for RNA: ENST00000520752.1

SHPRH-208, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 4

Gene SHPRH, Length 821 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-208ENST00000520752 ANKRD17O75179 2603 aaKnown RBP5.32□□□□□ -1.56
SHPRH-208ENST00000520752 MMP24-AS1A0A0U1RRL7 71 aa5.31□□□□□ -1.56
SHPRH-208ENST00000520752 ZNF861PO60384 105 aa5.31□□□□□ -1.56
SHPRH-208ENST00000520752 PCOTHQ58A44 107 aa5.31□□□□□ -1.56
SHPRH-208ENST00000520752 IGFL1Q6UW32 110 aa5.31□□□□□ -1.56
SHPRH-208ENST00000520752 LINC00472Q9H8W2 130 aa5.31□□□□□ -1.56
SHPRH-208ENST00000520752 COL6A6A6NMZ7 2263 aa5.31□□□□□ -1.56
SHPRH-208ENST00000520752 APC2O95996 2303 aa5.3□□□□□ -1.56
SHPRH-208ENST00000520752 ITPR1Q14643 2758 aa5.3□□□□□ -1.56
SHPRH-208ENST00000520752 ITPR3Q14573 2671 aa5.3□□□□□ -1.56
SHPRH-208ENST00000520752 TLX1NBP0CAT3 122 aa5.3□□□□□ -1.56
SHPRH-208ENST00000520752 KRTAP25-1Q3LHN0 102 aa5.3□□□□□ -1.56
SHPRH-208ENST00000520752 KRTAP9-8Q9BYQ0 159 aa5.3□□□□□ -1.56
SHPRH-208ENST00000520752 AKAP13Q12802 2813 aa5.3□□□□□ -1.56
SHPRH-208ENST00000520752 TENM4Q6N022 2769 aa5.3□□□□□ -1.56
SHPRH-208ENST00000520752 NOTCH2Q04721 2471 aa5.29□□□□□ -1.56
SHPRH-208ENST00000520752 A0A087WSZ3 146 aa5.29□□□□□ -1.56
SHPRH-208ENST00000520752 LOC400499M0QZD8 3231 aa5.29□□□□□ -1.56
SHPRH-208ENST00000520752 KRTAP5-3Q6L8H2 238 aa5.28□□□□□ -1.56
SHPRH-208ENST00000520752 C10orf99Q6UWK7 81 aa5.28□□□□□ -1.56
SHPRH-208ENST00000520752 TEX15Q9BXT5 2789 aa5.28□□□□□ -1.56
SHPRH-208ENST00000520752 RP1L1Q8IWN7 2480 aaPredicted RBP5.27□□□□□ -1.57
SHPRH-208ENST00000520752 MSMBP08118 114 aa5.26□□□□□ -1.57
SHPRH-208ENST00000520752 RPL37AP61513 92 aaKnown RBP5.25□□□□□ -1.57
SHPRH-208ENST00000520752 CFAP46Q8IYW2 2715 aa5.25□□□□□ -1.57
SHPRH-208ENST00000520752 DEFB130BP0DP73 79 aa5.24□□□□□ -1.57
SHPRH-208ENST00000520752 DEFB130AP0DP74 79 aa5.24□□□□□ -1.57
SHPRH-208ENST00000520752 KRTAP17-1Q9BYP8 105 aa5.24□□□□□ -1.57
SHPRH-208ENST00000520752 LAMA5O15230 3695 aa5.24□□□□□ -1.57
SHPRH-208ENST00000520752 MGAQ8IWI9 3026 aa5.23□□□□□ -1.57
SHPRH-208ENST00000520752 WDFY3Q8IZQ1 3526 aa5.23□□□□□ -1.57
SHPRH-208ENST00000520752 SPRR1BP22528 89 aa5.23□□□□□ -1.57
SHPRH-208ENST00000520752 KRTAP1-1Q07627 177 aa5.23□□□□□ -1.57
SHPRH-208ENST00000520752 DMAC1Q96GE9 116 aa5.23□□□□□ -1.57
SHPRH-208ENST00000520752 UBR5O95071 2799 aaPredicted RBP5.21□□□□□ -1.58
SHPRH-208ENST00000520752 DEFB136Q30KP8 78 aa5.21□□□□□ -1.58
SHPRH-208ENST00000520752 KRTAP26-1Q6PEX3 210 aa5.21□□□□□ -1.58
SHPRH-208ENST00000520752 FREM2Q5SZK8 3169 aa5.21□□□□□ -1.58
SHPRH-208ENST00000520752 KALRNO60229 2985 aa5.21□□□□□ -1.58
SHPRH-208ENST00000520752 FAM168BA1KXE4 195 aa5.2□□□□□ -1.58
SHPRH-208ENST00000520752 DEFB124Q8NES8 71 aa5.2□□□□□ -1.58
SHPRH-208ENST00000520752 C8orf17Q9NRJ1 99 aa5.2□□□□□ -1.58
SHPRH-208ENST00000520752 IGLV7-43P04211 117 aa5.19□□□□□ -1.58
SHPRH-208ENST00000520752 C15orf56Q8N910 161 aa5.19□□□□□ -1.58
SHPRH-208ENST00000520752 POLQO75417 2590 aa5.19□□□□□ -1.58
SHPRH-208ENST00000520752 MRPL34Q9BQ48 92 aaKnown RBP5.18□□□□□ -1.58
SHPRH-208ENST00000520752 A0A096LPF7 62 aa5.17□□□□□ -1.58
SHPRH-208ENST00000520752 KRTAP16-1A8MUX0 517 aa5.17□□□□□ -1.58
SHPRH-208ENST00000520752 KRTAP24-1Q3LI83 254 aa5.17□□□□□ -1.58
SHPRH-208ENST00000520752 LINC00483Q53H64 154 aa5.17□□□□□ -1.58
SHPRH-208ENST00000520752 AKAP6Q13023 2319 aa5.17□□□□□ -1.58
SHPRH-208ENST00000520752 CELSR3Q9NYQ7 3312 aa5.17□□□□□ -1.58
SHPRH-208ENST00000520752 ALMS1Q8TCU4 4167 aa5.16□□□□□ -1.58
SHPRH-208ENST00000520752 IGLV9-49A0A0B4J1Y8 123 aa5.15□□□□□ -1.59
SHPRH-208ENST00000520752 A0A1W2PPR1 153 aa5.15□□□□□ -1.59
SHPRH-208ENST00000520752 COL12A1Q99715 3063 aa5.15□□□□□ -1.59
SHPRH-208ENST00000520752 A0A1B0GVX0 72 aa5.14□□□□□ -1.59
SHPRH-208ENST00000520752 A8MUU9 505 aa5.14□□□□□ -1.59
SHPRH-208ENST00000520752 P0C880 135 aa5.14□□□□□ -1.59
SHPRH-208ENST00000520752 H3BNG1 76 aa5.13□□□□□ -1.59
SHPRH-208ENST00000520752 LAMA1P25391 3075 aa5.13□□□□□ -1.59
SHPRH-208ENST00000520752 ANKHD1Q8IWZ3 2542 aaKnown RBP5.13□□□□□ -1.59
SHPRH-208ENST00000520752 SETD2Q9BYW2 2564 aaPredicted RBP5.12□□□□□ -1.59
SHPRH-208ENST00000520752 LRRK2Q5S007 2527 aa5.12□□□□□ -1.59
SHPRH-208ENST00000520752 CDK2AP2O75956 126 aa5.12□□□□□ -1.59
SHPRH-208ENST00000520752 MT3P25713 68 aa5.12□□□□□ -1.59
SHPRH-208ENST00000520752 NUPR2A6NF83 97 aa5.11□□□□□ -1.59
SHPRH-208ENST00000520752 KRTAP13-3Q3SY46 172 aa5.11□□□□□ -1.59
SHPRH-208ENST00000520752 FBN2P35556 2912 aa5.1□□□□□ -1.59
SHPRH-208ENST00000520752 USP9YO00507 2555 aaPredicted RBP5.1□□□□□ -1.59
SHPRH-208ENST00000520752 KRTAP21-3Q3LHN1 58 aa5.1□□□□□ -1.59
SHPRH-208ENST00000520752 NBASA2RRP1 2371 aa5.09□□□□□ -1.59
SHPRH-208ENST00000520752 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.09□□□□□ -1.59
SHPRH-208ENST00000520752 ITPR2Q14571 2701 aa5.08□□□□□ -1.6
SHPRH-208ENST00000520752 SPART-AS1P0CW21 52 aa5.08□□□□□ -1.6
SHPRH-208ENST00000520752 DNAH10OSP0CZ25 163 aa5.08□□□□□ -1.6
SHPRH-208ENST00000520752 CCL19Q99731 98 aa5.08□□□□□ -1.6
SHPRH-208ENST00000520752 F8P00451 2351 aa5.08□□□□□ -1.6
SHPRH-208ENST00000520752 LY6G6CO95867 125 aa5.07□□□□□ -1.6
SHPRH-208ENST00000520752 Q96NJ1 140 aa5.07□□□□□ -1.6
SHPRH-208ENST00000520752 C20orf166-AS1Q96NR2 134 aa5.07□□□□□ -1.6
SHPRH-208ENST00000520752 KRTAP2-2Q9BYT5 123 aa5.07□□□□□ -1.6
SHPRH-208ENST00000520752 ABCA2Q9BZC7 2435 aa5.07□□□□□ -1.6
SHPRH-208ENST00000520752 FLNCQ14315 2725 aa5.07□□□□□ -1.6
SHPRH-208ENST00000520752 A0A0G2JQZ4 141 aa5.06□□□□□ -1.6
SHPRH-208ENST00000520752 A0A1W2PNN7 141 aa5.06□□□□□ -1.6
SHPRH-208ENST00000520752 FBN3Q75N90 2809 aa5.05□□□□□ -1.6
SHPRH-208ENST00000520752 LINC01556Q5JQF7 62 aa5.05□□□□□ -1.6
SHPRH-208ENST00000520752 LINC00304Q8N9R0 145 aa5.05□□□□□ -1.6
SHPRH-208ENST00000520752 ANAPC11Q9NYG5 84 aa5.05□□□□□ -1.6
SHPRH-208ENST00000520752 NBPF19A0A087WUL8 3843 aa5.05□□□□□ -1.6
SHPRH-208ENST00000520752 ATMQ13315 3056 aa5.04□□□□□ -1.6
SHPRH-208ENST00000520752 K7ERS5 55 aa5.04□□□□□ -1.6
SHPRH-208ENST00000520752 Q5W150 140 aa5.04□□□□□ -1.6
SHPRH-208ENST00000520752 KRTAP7-1Q8IUC3 87 aa5.04□□□□□ -1.6
SHPRH-208ENST00000520752 RELNP78509 3460 aa5.04□□□□□ -1.6
SHPRH-208ENST00000520752 SPG11Q96JI7 2443 aa5.04□□□□□ -1.6
SHPRH-208ENST00000520752 CENPEQ02224 2701 aa5.03□□□□□ -1.6
SHPRH-208ENST00000520752 DEFB113Q30KQ7 82 aa5.02□□□□□ -1.61
SHPRH-208ENST00000520752 CASC10Q5T4H9 136 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms