RNA–Protein interactions for RNA: ENST00000520602.5

MCF2-209, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,945 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-209ENST00000520602 CIRBP-AS1Q8TBR5 109 aa6.41□□□□□ -1.38
MCF2-209ENST00000520602 K7EQZ3 153 aa6.4□□□□□ -1.38
MCF2-209ENST00000520602 HCG22E2RYF7 251 aa6.4□□□□□ -1.39
MCF2-209ENST00000520602 MOBPQ13875 183 aa6.39□□□□□ -1.39
MCF2-209ENST00000520602 A0A1B0GW54 56 aa6.39□□□□□ -1.39
MCF2-209ENST00000520602 NDUFC1O43677 76 aa6.39□□□□□ -1.39
MCF2-209ENST00000520602 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.39□□□□□ -1.39
MCF2-209ENST00000520602 CASC2Q6XLA1 102 aa6.38□□□□□ -1.39
MCF2-209ENST00000520602 ANAPC11Q9NYG5 84 aa6.38□□□□□ -1.39
MCF2-209ENST00000520602 KRTAP7-1Q8IUC3 87 aa6.38□□□□□ -1.39
MCF2-209ENST00000520602 LINC00208Q96KT6 92 aa6.37□□□□□ -1.39
MCF2-209ENST00000520602 IGHV6-1A0A0B4J1U7 121 aa6.36□□□□□ -1.39
MCF2-209ENST00000520602 KRTAP4-16G5E9R7 235 aaPredicted RBP6.36□□□□□ -1.39
MCF2-209ENST00000520602 MPLKIPQ8TAP9 179 aa6.35□□□□□ -1.39
MCF2-209ENST00000520602 CYSTM1Q9H1C7 97 aa6.35□□□□□ -1.39
MCF2-209ENST00000520602 C4orf48Q5BLP8 95 aa6.35□□□□□ -1.39
MCF2-209ENST00000520602 PSORS1C2Q9UIG4 136 aa6.34□□□□□ -1.39
MCF2-209ENST00000520602 PANO1I0J062 215 aa6.34□□□□□ -1.39
MCF2-209ENST00000520602 WWC2-AS2Q96NR7 200 aa6.33□□□□□ -1.4
MCF2-209ENST00000520602 TNP2Q05952 138 aa6.31□□□□□ -1.4
MCF2-209ENST00000520602 SPRR4Q96PI1 79 aa6.31□□□□□ -1.4
MCF2-209ENST00000520602 C5orf47Q569G3 176 aa6.3□□□□□ -1.4
MCF2-209ENST00000520602 KRTAP11-1Q8IUC1 163 aa6.3□□□□□ -1.4
MCF2-209ENST00000520602 SERP1Q9Y6X1 66 aa6.3□□□□□ -1.4
MCF2-209ENST00000520602 DSCR10P59022 87 aa6.3□□□□□ -1.4
MCF2-209ENST00000520602 H0Y9P7 68 aa6.3□□□□□ -1.4
MCF2-209ENST00000520602 ZNF861PO60384 105 aa6.29□□□□□ -1.4
MCF2-209ENST00000520602 SPACA4Q8TDM5 124 aa6.29□□□□□ -1.4
MCF2-209ENST00000520602 H7BZZ5 65 aa6.29□□□□□ -1.4
MCF2-209ENST00000520602 KLKP1Q107X0 134 aa6.29□□□□□ -1.4
MCF2-209ENST00000520602 ATP5EP56381 51 aaPredicted RBP6.28□□□□□ -1.4
MCF2-209ENST00000520602 hDV103S1A0JD37 113 aa6.27□□□□□ -1.41
MCF2-209ENST00000520602 A8MWP4 228 aa6.27□□□□□ -1.41
MCF2-209ENST00000520602 PCOTHQ58A44 107 aa6.27□□□□□ -1.41
MCF2-209ENST00000520602 TGP01266 2768 aa6.27□□□□□ -1.41
MCF2-209ENST00000520602 PRR15Q8IV56 129 aa6.26□□□□□ -1.41
MCF2-209ENST00000520602 RPS28P62857 69 aaKnown RBP6.25□□□□□ -1.41
MCF2-209ENST00000520602 SMIM26A0A096LP01 95 aa6.25□□□□□ -1.41
MCF2-209ENST00000520602 OCR1Q9BZK8 76 aa6.25□□□□□ -1.41
MCF2-209ENST00000520602 Q6ZRN7 208 aaPredicted RBP6.25□□□□□ -1.41
MCF2-209ENST00000520602 C1orf64Q8NEQ6 169 aa6.24□□□□□ -1.41
MCF2-209ENST00000520602 RETNLBQ9BQ08 111 aa6.24□□□□□ -1.41
MCF2-209ENST00000520602 IGLV7-43P04211 117 aa6.23□□□□□ -1.41
MCF2-209ENST00000520602 C4orf26Q17RF5 130 aa6.21□□□□□ -1.42
MCF2-209ENST00000520602 A0A0U1RQV1 116 aa6.2□□□□□ -1.42
MCF2-209ENST00000520602 BRK1Q8WUW1 75 aa6.2□□□□□ -1.42
MCF2-209ENST00000520602 PLAC8Q9NZF1 115 aa6.2□□□□□ -1.42
MCF2-209ENST00000520602 SPRR1BP22528 89 aa6.19□□□□□ -1.42
MCF2-209ENST00000520602 Q6ZR54 194 aa6.19□□□□□ -1.42
MCF2-209ENST00000520602 IGLV8-61A0A075B6I0 122 aa6.19□□□□□ -1.42
MCF2-209ENST00000520602 TRAV22A0A0B4J277 110 aa6.18□□□□□ -1.42
MCF2-209ENST00000520602 KRTAP10-2P60368 255 aa6.18□□□□□ -1.42
MCF2-209ENST00000520602 C8orf17Q9NRJ1 99 aa6.17□□□□□ -1.42
MCF2-209ENST00000520602 SMR3BP02814 79 aaPredicted RBP6.16□□□□□ -1.42
MCF2-209ENST00000520602 PLA2G1BP04054 148 aaKnown RBP6.16□□□□□ -1.42
MCF2-209ENST00000520602 CHKB-CPT1BH3BT56 60 aa6.15□□□□□ -1.42
MCF2-209ENST00000520602 A0A1B0GVX0 72 aa6.15□□□□□ -1.43
MCF2-209ENST00000520602 LINC00472Q9H8W2 130 aa6.15□□□□□ -1.43
MCF2-209ENST00000520602 TP53AIP1Q9HCN2 124 aa6.14□□□□□ -1.43
MCF2-209ENST00000520602 SRRM2Q9UQ35 2752 aaKnown RBP6.14□□□□□ -1.43
MCF2-209ENST00000520602 PSPHP1O15172 72 aa6.14□□□□□ -1.43
MCF2-209ENST00000520602 MRPL34Q9BQ48 92 aaKnown RBP6.14□□□□□ -1.43
MCF2-209ENST00000520602 SSBP3-AS1Q7Z2R9 100 aa6.13□□□□□ -1.43
MCF2-209ENST00000520602 TYMSOSQ8TAI1 123 aa6.13□□□□□ -1.43
MCF2-209ENST00000520602 LINC00313P59037 77 aa6.11□□□□□ -1.43
MCF2-209ENST00000520602 LIMD2Q9BT23 127 aa6.11□□□□□ -1.43
MCF2-209ENST00000520602 KRTAP10-1P60331 282 aa6.1□□□□□ -1.43
MCF2-209ENST00000520602 H3BPC8 53 aa6.1□□□□□ -1.43
MCF2-209ENST00000520602 OXTP01178 125 aa6.1□□□□□ -1.43
MCF2-209ENST00000520602 MMP24-AS1A0A0U1RRL7 71 aa6.09□□□□□ -1.43
MCF2-209ENST00000520602 KRTAP13-1Q8IUC0 172 aa6.08□□□□□ -1.44
MCF2-209ENST00000520602 IGKV2D-30A0A075B6S6 120 aa6.07□□□□□ -1.44
MCF2-209ENST00000520602 IGKV2-30P06310 120 aa6.07□□□□□ -1.44
MCF2-209ENST00000520602 LINC00483Q53H64 154 aa6.06□□□□□ -1.44
MCF2-209ENST00000520602 V9GYY9 64 aa6.05□□□□□ -1.44
MCF2-209ENST00000520602 COL7A1Q02388 2944 aa6.05□□□□□ -1.44
MCF2-209ENST00000520602 PRR15LQ9BU68 103 aa6.05□□□□□ -1.44
MCF2-209ENST00000520602 CSMD3Q7Z407 3707 aa6.05□□□□□ -1.44
MCF2-209ENST00000520602 KRTAP29-1A8MX34 341 aaPredicted RBP6.03□□□□□ -1.44
MCF2-209ENST00000520602 HUWE1Q7Z6Z7 4374 aaKnown RBP6.03□□□□□ -1.44
MCF2-209ENST00000520602 Q96NJ1 140 aa6.03□□□□□ -1.44
MCF2-209ENST00000520602 C8orf87E5RJ46 101 aa6.02□□□□□ -1.45
MCF2-209ENST00000520602 FAM229BQ4G0N7 80 aa6.02□□□□□ -1.45
MCF2-209ENST00000520602 SPTSSBQ8NFR3 76 aa6.02□□□□□ -1.45
MCF2-209ENST00000520602 A0A087X002 238 aa6.01□□□□□ -1.45
MCF2-209ENST00000520602 A6NED7 52 aa6.01□□□□□ -1.45
MCF2-209ENST00000520602 SPAG11AQ6PDA7 123 aa6.01□□□□□ -1.45
MCF2-209ENST00000520602 PRR26Q8N8Z3 221 aa6□□□□□ -1.45
MCF2-209ENST00000520602 NOTCH2NLQ7Z3S9 236 aa6□□□□□ -1.45
MCF2-209ENST00000520602 COA5Q86WW8 74 aa6□□□□□ -1.45
MCF2-209ENST00000520602 LOC101927531A0A1B0GV80 90 aa6□□□□□ -1.45
MCF2-209ENST00000520602 LINC00304Q8N9R0 145 aa6□□□□□ -1.45
MCF2-209ENST00000520602 FBN3Q75N90 2809 aa5.99□□□□□ -1.45
MCF2-209ENST00000520602 CD164Q04900 197 aa5.99□□□□□ -1.45
MCF2-209ENST00000520602 Q5XG85 94 aa5.99□□□□□ -1.45
MCF2-209ENST00000520602 FP248Q71RG6 208 aaPredicted RBP5.99□□□□□ -1.45
MCF2-209ENST00000520602 FAM229AH3BQW9 127 aa5.99□□□□□ -1.45
MCF2-209ENST00000520602 LINC00336Q6ZUF6 198 aa5.99□□□□□ -1.45
MCF2-209ENST00000520602 MEGF8Q7Z7M0 2845 aa5.98□□□□□ -1.45
MCF2-209ENST00000520602 A8MUN3 132 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms