RNA–Protein interactions for RNA: ENST00000520580.5

SREK1-208, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 2

Gene SREK1, Length 2,369 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-208ENST00000520580 C10orf142B7Z368 130 aa1.19□□□□□ -2.22
SREK1-208ENST00000520580 ATOX1O00244 68 aa1.19□□□□□ -2.22
SREK1-208ENST00000520580 IGLC1P0CG04 106 aa1.19□□□□□ -2.22
SREK1-208ENST00000520580 LCE1CQ5T751 118 aa1.19□□□□□ -2.22
SREK1-208ENST00000520580 LCE1BQ5T7P3 118 aa1.19□□□□□ -2.22
SREK1-208ENST00000520580 Q6ZRX8 168 aa1.19□□□□□ -2.22
SREK1-208ENST00000520580 VMO1Q7Z5L0 202 aa1.19□□□□□ -2.22
SREK1-208ENST00000520580 C9orf62Q8N4C0 152 aa1.19□□□□□ -2.22
SREK1-208ENST00000520580 SMIM11BQ8TCY0 68 aa1.19□□□□□ -2.22
SREK1-208ENST00000520580 CACFD1Q9UGQ2 172 aa1.19□□□□□ -2.22
SREK1-208ENST00000520580 RNF213Q63HN8 5207 aa1.19□□□□□ -2.22
SREK1-208ENST00000520580 SFT2D2O95562 160 aa1.19□□□□□ -2.22
SREK1-208ENST00000520580 STATHP02808 62 aa1.19□□□□□ -2.22
SREK1-208ENST00000520580 FAM223AQ8IWN6 122 aa1.19□□□□□ -2.22
SREK1-208ENST00000520580 MYH4Q9Y623 1939 aa1.18□□□□□ -2.22
SREK1-208ENST00000520580 GVQW2A0A096LPI5 108 aaPredicted RBP1.18□□□□□ -2.22
SREK1-208ENST00000520580 LOC285095A0A1B0GVY8 99 aa1.18□□□□□ -2.22
SREK1-208ENST00000520580 GCHFRP30047 84 aa1.18□□□□□ -2.22
SREK1-208ENST00000520580 BAGE2Q86Y30 109 aa1.18□□□□□ -2.22
SREK1-208ENST00000520580 WNK2Q9Y3S1 2297 aa1.18□□□□□ -2.22
SREK1-208ENST00000520580 TFF3Q07654 80 aa1.18□□□□□ -2.22
SREK1-208ENST00000520580 DEFB121Q5J5C9 76 aa1.18□□□□□ -2.22
SREK1-208ENST00000520580 LINC01558Q9Y6Z2 57 aa1.18□□□□□ -2.22
SREK1-208ENST00000520580 DNAH9Q9NYC9 4486 aa1.17□□□□□ -2.22
SREK1-208ENST00000520580 COX6CP09669 75 aa1.17□□□□□ -2.22
SREK1-208ENST00000520580 HMGA1P17096 107 aaKnown RBP1.17□□□□□ -2.22
SREK1-208ENST00000520580 AMELXQ99217 191 aa1.17□□□□□ -2.22
SREK1-208ENST00000520580 KMT2AQ03164 3969 aa1.17□□□□□ -2.22
SREK1-208ENST00000520580 SERP2Q8N6R1 65 aa1.16□□□□□ -2.22
SREK1-208ENST00000520580 NDUFC1O43677 76 aa1.16□□□□□ -2.22
SREK1-208ENST00000520580 C20orf78Q9BR46 151 aa1.16□□□□□ -2.22
SREK1-208ENST00000520580 NXT2Q9NPJ8 142 aaKnown RBP1.16□□□□□ -2.22
SREK1-208ENST00000520580 PVALEFA0A1B0GWK0 134 aa1.15□□□□□ -2.22
SREK1-208ENST00000520580 UQCR11O14957 56 aa1.15□□□□□ -2.22
SREK1-208ENST00000520580 MUC5ACP98088 5654 aa1.15□□□□□ -2.23
SREK1-208ENST00000520580 FAM223BA6NKX1 122 aa1.15□□□□□ -2.23
SREK1-208ENST00000520580 SYS1-DBNDD2H3BUS1 97 aa1.15□□□□□ -2.23
SREK1-208ENST00000520580 FXYD6P3P58550 94 aa1.15□□□□□ -2.23
SREK1-208ENST00000520580 G3V318 75 aa1.14□□□□□ -2.23
SREK1-208ENST00000520580 H7BZZ5 65 aa1.14□□□□□ -2.23
SREK1-208ENST00000520580 MACF1Q9UPN3 7388 aaKnown RBP1.14□□□□□ -2.23
SREK1-208ENST00000520580 FAT4Q6V0I7 4981 aa1.14□□□□□ -2.23
SREK1-208ENST00000520580 UQCRHLA0A096LP55 91 aa1.14□□□□□ -2.23
SREK1-208ENST00000520580 HAMPP81172 84 aa1.14□□□□□ -2.23
SREK1-208ENST00000520580 SMIM4Q8WVI0 70 aa1.14□□□□□ -2.23
SREK1-208ENST00000520580 DNAH10Q8IVF4 4471 aa1.14□□□□□ -2.23
SREK1-208ENST00000520580 DNAJC13O75165 2243 aa1.14□□□□□ -2.23
SREK1-208ENST00000520580 PLIN4Q96Q06 1357 aa1.13□□□□□ -2.23
SREK1-208ENST00000520580 HSPG2P98160 4391 aa1.13□□□□□ -2.23
SREK1-208ENST00000520580 PKHD1P08F94 4074 aa1.13□□□□□ -2.23
SREK1-208ENST00000520580 TRBV7-7A0A0K0K1E9 115 aa1.13□□□□□ -2.23
SREK1-208ENST00000520580 SPTY2D1-AS1A0A0U1RR47 76 aa1.13□□□□□ -2.23
SREK1-208ENST00000520580 A0A1B0GWA3 101 aa1.13□□□□□ -2.23
SREK1-208ENST00000520580 UQCRHP07919 91 aa1.13□□□□□ -2.23
SREK1-208ENST00000520580 TRGV9Q99603 122 aa1.13□□□□□ -2.23
SREK1-208ENST00000520580 PRR15LQ9BU68 103 aa1.13□□□□□ -2.23
SREK1-208ENST00000520580 ARL14EPLP0DKL9 152 aa1.13□□□□□ -2.23
SREK1-208ENST00000520580 PMCHL1Q16048 86 aa1.13□□□□□ -2.23
SREK1-208ENST00000520580 PYY3Q5JQD4 70 aa1.13□□□□□ -2.23
SREK1-208ENST00000520580 DNAH7Q8WXX0 4024 aa1.13□□□□□ -2.23
SREK1-208ENST00000520580 SPINK9Q5DT21 86 aa1.12□□□□□ -2.23
SREK1-208ENST00000520580 LINC00472Q9H8W2 130 aa1.12□□□□□ -2.23
SREK1-208ENST00000520580 HMCN2Q8NDA2 5059 aa1.12□□□□□ -2.23
SREK1-208ENST00000520580 STARD9Q9P2P6 4700 aa1.12□□□□□ -2.23
SREK1-208ENST00000520580 PLECQ15149 4684 aaKnown RBP1.11□□□□□ -2.23
SREK1-208ENST00000520580 GYPAP02724 150 aa1.11□□□□□ -2.23
SREK1-208ENST00000520580 MGPP08493 103 aa1.11□□□□□ -2.23
SREK1-208ENST00000520580 SAA2P0DJI9 122 aaPredicted RBP1.11□□□□□ -2.23
SREK1-208ENST00000520580 HIGD1BQ9P298 99 aa1.11□□□□□ -2.23
SREK1-208ENST00000520580 MYCBP2O75592 4640 aa1.11□□□□□ -2.23
SREK1-208ENST00000520580 TRBV25-1A0A075B6N4 114 aa1.11□□□□□ -2.23
SREK1-208ENST00000520580 ZNF815PA8K554 130 aa1.11□□□□□ -2.23
SREK1-208ENST00000520580 FAT2Q9NYQ8 4349 aa1.1□□□□□ -2.23
SREK1-208ENST00000520580 HUWE1Q7Z6Z7 4374 aaKnown RBP1.1□□□□□ -2.23
SREK1-208ENST00000520580 C7orf77A4D0Y5 90 aa1.1□□□□□ -2.23
SREK1-208ENST00000520580 NMBP08949 121 aa1.1□□□□□ -2.23
SREK1-208ENST00000520580 PSMG4Q5JS54 123 aa1.1□□□□□ -2.23
SREK1-208ENST00000520580 DYNC1H1Q14204 4646 aaKnown RBP1.1□□□□□ -2.23
SREK1-208ENST00000520580 A0A087WVE0 104 aa1.1□□□□□ -2.23
SREK1-208ENST00000520580 A0A0D9SG42 100 aa1.1□□□□□ -2.23
SREK1-208ENST00000520580 COX17Q14061 63 aa1.1□□□□□ -2.23
SREK1-208ENST00000520580 KRTAP20-1Q3LI63 56 aa1.1□□□□□ -2.23
SREK1-208ENST00000520580 Q6JHZ5 121 aa1.1□□□□□ -2.23
SREK1-208ENST00000520580 UBE2DNLQ8IWF7 75 aa1.1□□□□□ -2.23
SREK1-208ENST00000520580 DNAH3Q8TD57 4116 aa1.09□□□□□ -2.23
SREK1-208ENST00000520580 K7EP34 96 aa1.09□□□□□ -2.23
SREK1-208ENST00000520580 ALMS1Q8TCU4 4167 aa1.09□□□□□ -2.24
SREK1-208ENST00000520580 CYB5AP00167 134 aa1.08□□□□□ -2.24
SREK1-208ENST00000520580 DNAH11Q96DT5 4516 aa1.08□□□□□ -2.24
SREK1-208ENST00000520580 PEA15Q15121 130 aa1.08□□□□□ -2.24
SREK1-208ENST00000520580 LCN9Q8WX39 176 aa1.08□□□□□ -2.24
SREK1-208ENST00000520580 S100A16Q96FQ6 103 aaKnown RBP1.08□□□□□ -2.24
SREK1-208ENST00000520580 FAT1Q14517 4588 aa1.07□□□□□ -2.24
SREK1-208ENST00000520580 DEFB108AA8MXU0 73 aa1.07□□□□□ -2.24
SREK1-208ENST00000520580 SSBP3-AS1Q7Z2R9 100 aa1.07□□□□□ -2.24
SREK1-208ENST00000520580 PROK2Q9HC23 129 aa1.07□□□□□ -2.24
SREK1-208ENST00000520580 APOBP04114 4563 aaKnown RBP1.07□□□□□ -2.24
SREK1-208ENST00000520580 LRP2P98164 4655 aa1.07□□□□□ -2.24
SREK1-208ENST00000520580 LELP1Q5T871 98 aa1.07□□□□□ -2.24
SREK1-208ENST00000520580 SPRR4Q96PI1 79 aa1.07□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms