RNA–Protein interactions for RNA: ENST00000519895.5

MCF2-208, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,346 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-208ENST00000519895 SCGB1A1P11684 91 aa1.7□□□□□ -2.14
MCF2-208ENST00000519895 RNASE13Q5GAN3 156 aaKnown RBP1.7□□□□□ -2.14
MCF2-208ENST00000519895 C1orf195Q5TG92 126 aa1.7□□□□□ -2.14
MCF2-208ENST00000519895 Q6Q795 121 aa1.7□□□□□ -2.14
MCF2-208ENST00000519895 KMT2DO14686 5537 aa1.7□□□□□ -2.14
MCF2-208ENST00000519895 A0A1B0GV72 72 aa1.7□□□□□ -2.14
MCF2-208ENST00000519895 H0YGX0 51 aa1.7□□□□□ -2.14
MCF2-208ENST00000519895 SMIM6P0DI80 62 aa1.7□□□□□ -2.14
MCF2-208ENST00000519895 TSPEAR-AS2P59090 65 aa1.7□□□□□ -2.14
MCF2-208ENST00000519895 ELOF1P60002 83 aaKnown RBP1.7□□□□□ -2.14
MCF2-208ENST00000519895 MIR7-3HGQ8N6C7 128 aa1.7□□□□□ -2.14
MCF2-208ENST00000519895 IGKV3OR2-268A0A0C4DH90 116 aa1.69□□□□□ -2.14
MCF2-208ENST00000519895 LINC00158P58513 81 aa1.69□□□□□ -2.14
MCF2-208ENST00000519895 PRR4Q16378 134 aa1.69□□□□□ -2.14
MCF2-208ENST00000519895 C2orf82Q6UX34 121 aa1.69□□□□□ -2.14
MCF2-208ENST00000519895 Q6ZRX8 168 aa1.69□□□□□ -2.14
MCF2-208ENST00000519895 LECT2O14960 151 aa1.69□□□□□ -2.14
MCF2-208ENST00000519895 SMIM13P0DJ93 91 aa1.69□□□□□ -2.14
MCF2-208ENST00000519895 DDTP30046 118 aa1.69□□□□□ -2.14
MCF2-208ENST00000519895 HINT1P49773 126 aaPredicted RBP1.69□□□□□ -2.14
MCF2-208ENST00000519895 PRO0628Q9UI54 55 aa1.69□□□□□ -2.14
MCF2-208ENST00000519895 TRAV23DV6A0A075B6W5 121 aa1.69□□□□□ -2.14
MCF2-208ENST00000519895 C8orf87E5RJ46 101 aa1.69□□□□□ -2.14
MCF2-208ENST00000519895 KRTAP5-9P26371 169 aa1.69□□□□□ -2.14
MCF2-208ENST00000519895 BVES-AS1Q5T3Y7 98 aa1.69□□□□□ -2.14
MCF2-208ENST00000519895 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.69□□□□□ -2.14
MCF2-208ENST00000519895 DPH3Q96FX2 82 aa1.69□□□□□ -2.14
MCF2-208ENST00000519895 SPRR4Q96PI1 79 aa1.69□□□□□ -2.14
MCF2-208ENST00000519895 SIGMAR1Q99720 223 aa1.69□□□□□ -2.14
MCF2-208ENST00000519895 TOMM7Q9P0U1 55 aa1.69□□□□□ -2.14
MCF2-208ENST00000519895 SNCGO76070 127 aa1.68□□□□□ -2.14
MCF2-208ENST00000519895 HSD52Q0P140 79 aa1.68□□□□□ -2.14
MCF2-208ENST00000519895 Q6JHZ5 121 aa1.68□□□□□ -2.14
MCF2-208ENST00000519895 PHF5AQ7RTV0 110 aaKnown RBP1.68□□□□□ -2.14
MCF2-208ENST00000519895 MIEN1Q9BRT3 115 aa1.68□□□□□ -2.14
MCF2-208ENST00000519895 SMIM26A0A096LP01 95 aa1.68□□□□□ -2.14
MCF2-208ENST00000519895 ZNF73O43830 326 aaPredicted RBP1.68□□□□□ -2.14
MCF2-208ENST00000519895 CRYGAP11844 174 aa1.68□□□□□ -2.14
MCF2-208ENST00000519895 KRTDAPP60985 99 aa1.68□□□□□ -2.14
MCF2-208ENST00000519895 UBE2BP63146 152 aa1.68□□□□□ -2.14
MCF2-208ENST00000519895 C1orf137Q5JT78 98 aa1.68□□□□□ -2.14
MCF2-208ENST00000519895 OCR1Q9BZK8 76 aa1.68□□□□□ -2.14
MCF2-208ENST00000519895 UQCR10Q9UDW1 63 aa1.68□□□□□ -2.14
MCF2-208ENST00000519895 IGKV2-28A0A075B6P5 120 aa1.68□□□□□ -2.14
MCF2-208ENST00000519895 SPINK1P00995 79 aa1.68□□□□□ -2.14
MCF2-208ENST00000519895 IGKV2D-28P01615 120 aa1.68□□□□□ -2.14
MCF2-208ENST00000519895 ADAMTSL4-AS1Q5T5F5 129 aa1.68□□□□□ -2.14
MCF2-208ENST00000519895 SS18L2Q9UHA2 77 aa1.68□□□□□ -2.14
MCF2-208ENST00000519895 ETDCA0A1B0GVM5 59 aa1.67□□□□□ -2.14
MCF2-208ENST00000519895 COX7BP24311 80 aa1.67□□□□□ -2.14
MCF2-208ENST00000519895 KRTAP19-6Q3LI70 58 aa1.67□□□□□ -2.14
MCF2-208ENST00000519895 VAMP8Q9BV40 100 aa1.67□□□□□ -2.14
MCF2-208ENST00000519895 RBM12B-AS1Q9P1G2 102 aa1.67□□□□□ -2.14
MCF2-208ENST00000519895 IGKV2-24A0A0C4DH68 120 aa1.67□□□□□ -2.14
MCF2-208ENST00000519895 TRBV10-3A0A0K0K1G6 114 aa1.67□□□□□ -2.14
MCF2-208ENST00000519895 UBE2AP49459 152 aa1.67□□□□□ -2.14
MCF2-208ENST00000519895 Q8NBF4 154 aa1.67□□□□□ -2.14
MCF2-208ENST00000519895 SMCR5Q8TEV8 140 aa1.67□□□□□ -2.14
MCF2-208ENST00000519895 A0A087X002 238 aa1.66□□□□□ -2.14
MCF2-208ENST00000519895 C2orf91Q6ZV80 131 aa1.66□□□□□ -2.14
MCF2-208ENST00000519895 CEND1Q8N111 149 aa1.66□□□□□ -2.14
MCF2-208ENST00000519895 TEX49A0A1B0GTD5 131 aa1.66□□□□□ -2.14
MCF2-208ENST00000519895 FAM168BA1KXE4 195 aa1.66□□□□□ -2.14
MCF2-208ENST00000519895 M0R143 59 aa1.66□□□□□ -2.14
MCF2-208ENST00000519895 PSPHP1O15172 72 aa1.66□□□□□ -2.14
MCF2-208ENST00000519895 NDUFS5O43920 106 aa1.66□□□□□ -2.14
MCF2-208ENST00000519895 KRTAP10-6P60371 365 aaPredicted RBP1.66□□□□□ -2.14
MCF2-208ENST00000519895 S100A7L2Q5SY68 101 aa1.66□□□□□ -2.14
MCF2-208ENST00000519895 LYRM7Q5U5X0 104 aa1.66□□□□□ -2.14
MCF2-208ENST00000519895 LINC00575Q6W349 94 aa1.66□□□□□ -2.14
MCF2-208ENST00000519895 SCGB1D4Q6XE38 83 aa1.66□□□□□ -2.14
MCF2-208ENST00000519895 SMIM29Q86T20 159 aa1.66□□□□□ -2.14
MCF2-208ENST00000519895 KRTAP11-1Q8IUC1 163 aa1.66□□□□□ -2.14
MCF2-208ENST00000519895 TRACP01848 142 aa1.66□□□□□ -2.14
MCF2-208ENST00000519895 TPRXLQ17RH7 258 aa1.66□□□□□ -2.14
MCF2-208ENST00000519895 C6orf99Q4VX62 202 aa1.66□□□□□ -2.14
MCF2-208ENST00000519895 SPATA45Q537H7 98 aa1.66□□□□□ -2.14
MCF2-208ENST00000519895 MUSTN1Q8IVN3 82 aa1.66□□□□□ -2.14
MCF2-208ENST00000519895 Q8NDZ9 215 aa1.66□□□□□ -2.14
MCF2-208ENST00000519895 LIMD2Q9BT23 127 aa1.66□□□□□ -2.14
MCF2-208ENST00000519895 LAMTOR3Q9UHA4 124 aa1.66□□□□□ -2.14
MCF2-208ENST00000519895 FAM236DA0A1B0GTK5 79 aa1.65□□□□□ -2.14
MCF2-208ENST00000519895 SMR3BP02814 79 aaPredicted RBP1.65□□□□□ -2.14
MCF2-208ENST00000519895 FAM236CP0DP71 79 aa1.65□□□□□ -2.14
MCF2-208ENST00000519895 PDE6GP18545 87 aa1.65□□□□□ -2.14
MCF2-208ENST00000519895 XAGE1AQ9HD64 81 aa1.65□□□□□ -2.14
MCF2-208ENST00000519895 SLC25A20O43772 301 aa1.65□□□□□ -2.15
MCF2-208ENST00000519895 CFC1P0CG37 223 aa1.65□□□□□ -2.15
MCF2-208ENST00000519895 PYY3Q5JQD4 70 aa1.65□□□□□ -2.15
MCF2-208ENST00000519895 PCP2Q8IVA1 136 aa1.65□□□□□ -2.15
MCF2-208ENST00000519895 Q9BRP9 147 aa1.65□□□□□ -2.15
MCF2-208ENST00000519895 PRO1933Q9H354 126 aa1.65□□□□□ -2.15
MCF2-208ENST00000519895 PRO1854Q9UHT4 67 aa1.65□□□□□ -2.15
MCF2-208ENST00000519895 PMAIP1Q13794 54 aa1.64□□□□□ -2.15
MCF2-208ENST00000519895 TRBV20-1A0A075B6N2 111 aa1.64□□□□□ -2.15
MCF2-208ENST00000519895 TSTD3H0UI37 97 aa1.64□□□□□ -2.15
MCF2-208ENST00000519895 COX6CP09669 75 aa1.64□□□□□ -2.15
MCF2-208ENST00000519895 CXCL6P80162 114 aa1.64□□□□□ -2.15
MCF2-208ENST00000519895 KRTAP13-2Q52LG2 175 aa1.64□□□□□ -2.15
MCF2-208ENST00000519895 LINC00304Q8N9R0 145 aa1.64□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms