RNA–Protein interactions for RNA: ENST00000519309.5

CTNNA1-215, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-215ENST00000519309 DEFB105AQ8NG35 78 aa4.39□□□□□ -1.71
CTNNA1-215ENST00000519309 A6NDN8 102 aa4.38□□□□□ -1.71
CTNNA1-215ENST00000519309 IFITM1P13164 125 aa4.38□□□□□ -1.71
CTNNA1-215ENST00000519309 S100A1P23297 94 aa4.38□□□□□ -1.71
CTNNA1-215ENST00000519309 SMIM11BQ8TCY0 68 aa4.38□□□□□ -1.71
CTNNA1-215ENST00000519309 CBY1Q9Y3M2 126 aa4.38□□□□□ -1.71
CTNNA1-215ENST00000519309 IGLV5-48A0A075B6I7 105 aa4.37□□□□□ -1.71
CTNNA1-215ENST00000519309 TRBV7-6A0A0J9YX20 115 aa4.37□□□□□ -1.71
CTNNA1-215ENST00000519309 C9orf118A6NHY6 69 aa4.37□□□□□ -1.71
CTNNA1-215ENST00000519309 Q5XG85 94 aa4.37□□□□□ -1.71
CTNNA1-215ENST00000519309 H7C2G1 150 aa4.36□□□□□ -1.71
CTNNA1-215ENST00000519309 CD164Q04900 197 aa4.36□□□□□ -1.71
CTNNA1-215ENST00000519309 TAL2Q16559 108 aa4.36□□□□□ -1.71
CTNNA1-215ENST00000519309 Q6ZVH6 145 aa4.36□□□□□ -1.71
CTNNA1-215ENST00000519309 LAMTOR3Q9UHA4 124 aa4.36□□□□□ -1.71
CTNNA1-215ENST00000519309 MACF1Q9UPN3 7388 aaKnown RBP4.36□□□□□ -1.71
CTNNA1-215ENST00000519309 TEX49A0A1B0GTD5 131 aa4.35□□□□□ -1.71
CTNNA1-215ENST00000519309 A0A1B0GWB2 263 aa4.35□□□□□ -1.71
CTNNA1-215ENST00000519309 S100A2P29034 98 aa4.35□□□□□ -1.71
CTNNA1-215ENST00000519309 A4D1N5 150 aa4.34□□□□□ -1.71
CTNNA1-215ENST00000519309 MT2AP02795 61 aa4.34□□□□□ -1.71
CTNNA1-215ENST00000519309 SNRPEP62304 92 aaKnown RBP4.34□□□□□ -1.71
CTNNA1-215ENST00000519309 SLC25A34Q6PIV7 304 aa4.34□□□□□ -1.71
CTNNA1-215ENST00000519309 TRAV13-2A0A0B4J235 113 aa4.33□□□□□ -1.72
CTNNA1-215ENST00000519309 S100A6P06703 90 aa4.33□□□□□ -1.72
CTNNA1-215ENST00000519309 C1orf195Q5TG92 126 aa4.33□□□□□ -1.72
CTNNA1-215ENST00000519309 COPS9Q8WXC6 57 aa4.33□□□□□ -1.72
CTNNA1-215ENST00000519309 C12orf57Q99622 126 aa4.33□□□□□ -1.72
CTNNA1-215ENST00000519309 PRO1933Q9H354 126 aa4.33□□□□□ -1.72
CTNNA1-215ENST00000519309 AKR1D1P51857 326 aa4.32□□□□□ -1.72
CTNNA1-215ENST00000519309 LINC00575Q6W349 94 aa4.32□□□□□ -1.72
CTNNA1-215ENST00000519309 KRTAP9-3Q9BYQ3 159 aa4.32□□□□□ -1.72
CTNNA1-215ENST00000519309 HSBP1L1C9JCN9 74 aa4.31□□□□□ -1.72
CTNNA1-215ENST00000519309 Q6Q795 121 aa4.31□□□□□ -1.72
CTNNA1-215ENST00000519309 SCGB1D1O95968 90 aa4.3□□□□□ -1.72
CTNNA1-215ENST00000519309 MT1FP04733 61 aa4.3□□□□□ -1.72
CTNNA1-215ENST00000519309 KRTAP6-3Q3LI67 103 aa4.3□□□□□ -1.72
CTNNA1-215ENST00000519309 KRTAP19-6Q3LI70 58 aa4.3□□□□□ -1.72
CTNNA1-215ENST00000519309 Q6ZQY7 126 aa4.3□□□□□ -1.72
CTNNA1-215ENST00000519309 COX8AP10176 69 aa4.29□□□□□ -1.72
CTNNA1-215ENST00000519309 hADV29S1A0JD25 119 aa4.28□□□□□ -1.72
CTNNA1-215ENST00000519309 C2orf91Q6ZV80 131 aa4.28□□□□□ -1.72
CTNNA1-215ENST00000519309 C14orf144Q96I85 54 aa4.28□□□□□ -1.72
CTNNA1-215ENST00000519309 HIST1H4GQ99525 98 aa4.28□□□□□ -1.72
CTNNA1-215ENST00000519309 LINC00846Q9NV44 126 aa4.28□□□□□ -1.72
CTNNA1-215ENST00000519309 NHP2Q9NX24 153 aaKnown RBP4.28□□□□□ -1.72
CTNNA1-215ENST00000519309 IGFL1Q6UW32 110 aa4.27□□□□□ -1.73
CTNNA1-215ENST00000519309 Q75L30 129 aa4.27□□□□□ -1.73
CTNNA1-215ENST00000519309 SYNE2Q8WXH0 6885 aaKnown RBP4.26□□□□□ -1.73
CTNNA1-215ENST00000519309 DLEU1O43261 78 aa4.26□□□□□ -1.73
CTNNA1-215ENST00000519309 VAMP3Q15836 100 aa4.26□□□□□ -1.73
CTNNA1-215ENST00000519309 PAM16Q9Y3D7 125 aa4.26□□□□□ -1.73
CTNNA1-215ENST00000519309 H3BUT2 72 aa4.25□□□□□ -1.73
CTNNA1-215ENST00000519309 SPATA45Q537H7 98 aa4.25□□□□□ -1.73
CTNNA1-215ENST00000519309 ATP11AUNQ6ZP68 121 aa4.25□□□□□ -1.73
CTNNA1-215ENST00000519309 FAM218AQ96MZ4 157 aa4.25□□□□□ -1.73
CTNNA1-215ENST00000519309 TRBV7-7A0A0K0K1E9 115 aa4.24□□□□□ -1.73
CTNNA1-215ENST00000519309 F8WEM9 126 aa4.24□□□□□ -1.73
CTNNA1-215ENST00000519309 OCIAD2Q56VL3 154 aa4.24□□□□□ -1.73
CTNNA1-215ENST00000519309 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.24□□□□□ -1.73
CTNNA1-215ENST00000519309 CLEC2BQ92478 149 aa4.24□□□□□ -1.73
CTNNA1-215ENST00000519309 HIGD1BQ9P298 99 aa4.23□□□□□ -1.73
CTNNA1-215ENST00000519309 TCL1BO95988 128 aa4.22□□□□□ -1.73
CTNNA1-215ENST00000519309 BVES-AS1Q5T3Y7 98 aa4.22□□□□□ -1.73
CTNNA1-215ENST00000519309 VAMP8Q9BV40 100 aa4.22□□□□□ -1.73
CTNNA1-215ENST00000519309 A0A0B4J2C4 111 aa4.21□□□□□ -1.74
CTNNA1-215ENST00000519309 FXYD2P54710 66 aa4.21□□□□□ -1.74
CTNNA1-215ENST00000519309 KRTAP10-10P60014 251 aa4.21□□□□□ -1.74
CTNNA1-215ENST00000519309 Q6JHZ5 121 aa4.21□□□□□ -1.74
CTNNA1-215ENST00000519309 TRIAP1O43715 76 aa4.2□□□□□ -1.74
CTNNA1-215ENST00000519309 PYY3Q5JQD4 70 aa4.2□□□□□ -1.74
CTNNA1-215ENST00000519309 RAB37Q96AX2 223 aa4.2□□□□□ -1.74
CTNNA1-215ENST00000519309 TRBV20-1A0A075B6N2 111 aa4.19□□□□□ -1.74
CTNNA1-215ENST00000519309 CEND1Q8N111 149 aa4.19□□□□□ -1.74
CTNNA1-215ENST00000519309 PPDPFLQ8WWR9 84 aa4.19□□□□□ -1.74
CTNNA1-215ENST00000519309 OBSCN-AS1Q96MR7 158 aa4.19□□□□□ -1.74
CTNNA1-215ENST00000519309 SNHG12Q9BXW3 62 aa4.19□□□□□ -1.74
CTNNA1-215ENST00000519309 K7ERJ3 54 aa4.18□□□□□ -1.74
CTNNA1-215ENST00000519309 C20orf166-AS1Q96NR2 134 aa4.18□□□□□ -1.74
CTNNA1-215ENST00000519309 H0YGX0 51 aa4.17□□□□□ -1.74
CTNNA1-215ENST00000519309 NDUFV3P56181 108 aaKnown RBP4.17□□□□□ -1.74
CTNNA1-215ENST00000519309 LCE3BQ5TA77 95 aa4.17□□□□□ -1.74
CTNNA1-215ENST00000519309 Q96NJ1 140 aa4.17□□□□□ -1.74
CTNNA1-215ENST00000519309 PRO1854Q9UHT4 67 aa4.17□□□□□ -1.74
CTNNA1-215ENST00000519309 KRTAP4-8A0A0G2JLE6 195 aa4.16□□□□□ -1.74
CTNNA1-215ENST00000519309 A8MUU9 505 aa4.16□□□□□ -1.74
CTNNA1-215ENST00000519309 A0A087WSZ3 146 aa4.15□□□□□ -1.75
CTNNA1-215ENST00000519309 A0A1B0GV72 72 aa4.15□□□□□ -1.75
CTNNA1-215ENST00000519309 A0A1W2PNM2 257 aa4.15□□□□□ -1.75
CTNNA1-215ENST00000519309 LST1O00453 97 aa4.15□□□□□ -1.75
CTNNA1-215ENST00000519309 MPLKIPQ8TAP9 179 aa4.15□□□□□ -1.75
CTNNA1-215ENST00000519309 KRTAP23-1A1A580 65 aa4.14□□□□□ -1.75
CTNNA1-215ENST00000519309 H3BMG7 143 aa4.14□□□□□ -1.75
CTNNA1-215ENST00000519309 FABP2P12104 132 aa4.14□□□□□ -1.75
CTNNA1-215ENST00000519309 KRTAP9-9Q9BYP9 154 aa4.14□□□□□ -1.75
CTNNA1-215ENST00000519309 KRTAP9-4Q9BYQ2 154 aa4.14□□□□□ -1.75
CTNNA1-215ENST00000519309 A0A1B0GX51 115 aa4.13□□□□□ -1.75
CTNNA1-215ENST00000519309 HSD52Q0P140 79 aa4.13□□□□□ -1.75
CTNNA1-215ENST00000519309 KRTAP20-1Q3LI63 56 aa4.13□□□□□ -1.75
CTNNA1-215ENST00000519309 TEN1Q86WV5 123 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms