RNA–Protein interactions for RNA: ENST00000519254.2

CLN8-204, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-204ENST00000519254 DNAH8Q96JB1 4490 aa8.91□□□□□ -0.98
CLN8-204ENST00000519254 SRRM2Q9UQ35 2752 aaKnown RBP8.9□□□□□ -0.98
CLN8-204ENST00000519254 SCGB1A1P11684 91 aa8.9□□□□□ -0.98
CLN8-204ENST00000519254 KRTAP13-1Q8IUC0 172 aa8.9□□□□□ -0.98
CLN8-204ENST00000519254 PSORS1C2Q9UIG4 136 aa8.9□□□□□ -0.98
CLN8-204ENST00000519254 UBE2AP49459 152 aa8.89□□□□□ -0.99
CLN8-204ENST00000519254 SMIM29Q86T20 159 aa8.89□□□□□ -0.99
CLN8-204ENST00000519254 DYNC1H1Q14204 4646 aaKnown RBP8.88□□□□□ -0.99
CLN8-204ENST00000519254 LRP1BQ9NZR2 4599 aa8.88□□□□□ -0.99
CLN8-204ENST00000519254 C1orf137Q5JT78 98 aa8.88□□□□□ -0.99
CLN8-204ENST00000519254 TRBV7-7A0A0K0K1E9 115 aa8.86□□□□□ -0.99
CLN8-204ENST00000519254 Q6Q795 121 aa8.86□□□□□ -0.99
CLN8-204ENST00000519254 SMR3BP02814 79 aaPredicted RBP8.85□□□□□ -0.99
CLN8-204ENST00000519254 Q6JHZ5 121 aa8.84□□□□□ -1
CLN8-204ENST00000519254 SPRR1BP22528 89 aa8.83□□□□□ -1
CLN8-204ENST00000519254 UBL5Q9BZL1 73 aa8.82□□□□□ -1
CLN8-204ENST00000519254 IGKV3D-7A0A0C4DH55 119 aa8.81□□□□□ -1
CLN8-204ENST00000519254 IMUPQ9GZP8 106 aa8.81□□□□□ -1
CLN8-204ENST00000519254 A0A1W2PNM2 257 aa8.81□□□□□ -1
CLN8-204ENST00000519254 Q6ZVQ6 151 aa8.8□□□□□ -1
CLN8-204ENST00000519254 IGLV8-61A0A075B6I0 122 aa8.79□□□□□ -1
CLN8-204ENST00000519254 F8WEM9 126 aa8.79□□□□□ -1
CLN8-204ENST00000519254 IGLV7-43P04211 117 aa8.79□□□□□ -1
CLN8-204ENST00000519254 RPL37AP61513 92 aaKnown RBP8.78□□□□□ -1
CLN8-204ENST00000519254 EPPK1P58107 5090 aaKnown RBP8.78□□□□□ -1
CLN8-204ENST00000519254 CDK2AP2O75956 126 aa8.77□□□□□ -1.01
CLN8-204ENST00000519254 C4orf48Q5BLP8 95 aa8.77□□□□□ -1.01
CLN8-204ENST00000519254 APOBP04114 4563 aaKnown RBP8.77□□□□□ -1.01
CLN8-204ENST00000519254 A0A0G2JQZ4 141 aa8.76□□□□□ -1.01
CLN8-204ENST00000519254 ZNF861PO60384 105 aa8.76□□□□□ -1.01
CLN8-204ENST00000519254 ATP5EP2Q5VTU8 51 aa8.76□□□□□ -1.01
CLN8-204ENST00000519254 Q8NBF4 154 aa8.76□□□□□ -1.01
CLN8-204ENST00000519254 IGFL1Q6UW32 110 aa8.76□□□□□ -1.01
CLN8-204ENST00000519254 SPRR4Q96PI1 79 aa8.76□□□□□ -1.01
CLN8-204ENST00000519254 A0A1B0GW54 56 aa8.73□□□□□ -1.01
CLN8-204ENST00000519254 LINC00483Q53H64 154 aa8.73□□□□□ -1.01
CLN8-204ENST00000519254 LCE2DQ5TA82 110 aaPredicted RBP8.73□□□□□ -1.01
CLN8-204ENST00000519254 CRYGAP11844 174 aa8.71□□□□□ -1.01
CLN8-204ENST00000519254 NREPQ16612 68 aa8.71□□□□□ -1.02
CLN8-204ENST00000519254 FAM236AA0A1B0GUQ0 79 aa8.7□□□□□ -1.02
CLN8-204ENST00000519254 FAM236BA0A1B0GV22 79 aa8.7□□□□□ -1.02
CLN8-204ENST00000519254 ZNF706Q9Y5V0 76 aaPredicted RBP8.7□□□□□ -1.02
CLN8-204ENST00000519254 A0A087WVE0 104 aa8.69□□□□□ -1.02
CLN8-204ENST00000519254 CXCL6P80162 114 aa8.69□□□□□ -1.02
CLN8-204ENST00000519254 FAM229AH3BQW9 127 aa8.68□□□□□ -1.02
CLN8-204ENST00000519254 HIST1H4AP62805 103 aaKnown RBP8.68□□□□□ -1.02
CLN8-204ENST00000519254 Q5VSD8 79 aa8.67□□□□□ -1.02
CLN8-204ENST00000519254 VPS13BQ7Z7G8 4022 aa8.67□□□□□ -1.02
CLN8-204ENST00000519254 PLA2G1BP04054 148 aaKnown RBP8.66□□□□□ -1.02
CLN8-204ENST00000519254 KRTAP10-4P60372 401 aaPredicted RBP8.66□□□□□ -1.02
CLN8-204ENST00000519254 KRTAP3-3Q9BYR6 98 aa8.66□□□□□ -1.02
CLN8-204ENST00000519254 KRTAP3-2Q9BYR7 98 aa8.66□□□□□ -1.02
CLN8-204ENST00000519254 ANAPC13Q9BS18 74 aa8.66□□□□□ -1.02
CLN8-204ENST00000519254 ANAPC11Q9NYG5 84 aa8.66□□□□□ -1.02
CLN8-204ENST00000519254 IGLV9-49A0A0B4J1Y8 123 aa8.65□□□□□ -1.02
CLN8-204ENST00000519254 RYR1P21817 5038 aa8.65□□□□□ -1.03
CLN8-204ENST00000519254 HSPG2P98160 4391 aa8.63□□□□□ -1.03
CLN8-204ENST00000519254 KIAA1109Q2LD37 5005 aa8.63□□□□□ -1.03
CLN8-204ENST00000519254 SPINK6Q6UWN8 80 aa8.63□□□□□ -1.03
CLN8-204ENST00000519254 KRTAP17-1Q9BYP8 105 aa8.63□□□□□ -1.03
CLN8-204ENST00000519254 A0A087WSZ3 146 aa8.62□□□□□ -1.03
CLN8-204ENST00000519254 BPY2O14599 106 aa8.62□□□□□ -1.03
CLN8-204ENST00000519254 C9orf153Q5TBE3 101 aa8.62□□□□□ -1.03
CLN8-204ENST00000519254 FAT1Q14517 4588 aa8.6□□□□□ -1.03
CLN8-204ENST00000519254 Q8N1X5 172 aa8.6□□□□□ -1.03
CLN8-204ENST00000519254 MOBPQ13875 183 aa8.59□□□□□ -1.03
CLN8-204ENST00000519254 Q8N9L7 120 aa8.59□□□□□ -1.03
CLN8-204ENST00000519254 IGKV4-1P06312 121 aa8.58□□□□□ -1.04
CLN8-204ENST00000519254 ATOX1O00244 68 aa8.56□□□□□ -1.04
CLN8-204ENST00000519254 KRTAP1-4P0C5Y4 121 aa8.56□□□□□ -1.04
CLN8-204ENST00000519254 DSCR10P59022 87 aa8.56□□□□□ -1.04
CLN8-204ENST00000519254 A0A087X002 238 aa8.53□□□□□ -1.04
CLN8-204ENST00000519254 DEFB116Q30KQ4 102 aa8.53□□□□□ -1.04
CLN8-204ENST00000519254 HRCT1Q6UXD1 115 aa8.53□□□□□ -1.04
CLN8-204ENST00000519254 LINC00472Q9H8W2 130 aa8.52□□□□□ -1.05
CLN8-204ENST00000519254 BIRC6Q9NR09 4857 aa8.52□□□□□ -1.05
CLN8-204ENST00000519254 CCDC179H3BU77 68 aa8.51□□□□□ -1.05
CLN8-204ENST00000519254 FAM229BQ4G0N7 80 aa8.51□□□□□ -1.05
CLN8-204ENST00000519254 K7EQZ3 153 aa8.5□□□□□ -1.05
CLN8-204ENST00000519254 KRTAP13-2Q52LG2 175 aa8.49□□□□□ -1.05
CLN8-204ENST00000519254 SSBP3-AS1Q7Z2R9 100 aa8.48□□□□□ -1.05
CLN8-204ENST00000519254 SERP2Q8N6R1 65 aa8.48□□□□□ -1.05
CLN8-204ENST00000519254 PRR26Q8N8Z3 221 aa8.48□□□□□ -1.05
CLN8-204ENST00000519254 COX7CP15954 63 aa8.47□□□□□ -1.05
CLN8-204ENST00000519254 Q96NJ1 140 aa8.47□□□□□ -1.05
CLN8-204ENST00000519254 KRTAP4-5Q9BYR2 181 aa8.46□□□□□ -1.05
CLN8-204ENST00000519254 PKHD1L1Q86WI1 4243 aa8.45□□□□□ -1.06
CLN8-204ENST00000519254 UQCRQO14949 82 aa8.45□□□□□ -1.06
CLN8-204ENST00000519254 CD164Q04900 197 aa8.44□□□□□ -1.06
CLN8-204ENST00000519254 TYMSOSQ8TAI1 123 aa8.44□□□□□ -1.06
CLN8-204ENST00000519254 SS18L2Q9UHA2 77 aa8.44□□□□□ -1.06
CLN8-204ENST00000519254 A8MWP4 228 aa8.42□□□□□ -1.06
CLN8-204ENST00000519254 TRAV7A0A075B6U4 112 aa8.41□□□□□ -1.06
CLN8-204ENST00000519254 J3KT08 172 aa8.41□□□□□ -1.06
CLN8-204ENST00000519254 PRR15Q8IV56 129 aa8.41□□□□□ -1.06
CLN8-204ENST00000519254 SMIM20Q8N5G0 67 aa8.4□□□□□ -1.06
CLN8-204ENST00000519254 HCG22E2RYF7 251 aa8.39□□□□□ -1.07
CLN8-204ENST00000519254 OCR1Q9BZK8 76 aa8.37□□□□□ -1.07
CLN8-204ENST00000519254 FLG2Q5D862 2391 aaPredicted RBP8.35□□□□□ -1.07
CLN8-204ENST00000519254 HERC2O95714 4834 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms