RNA–Protein interactions for RNA: ENST00000518604.1

SQLE-202, Transcript of squalene epoxidase, humanhuman

TSL 2

Gene SQLE, Length 743 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-202ENST00000518604 LMTK2Q8IWU2 1503 aa0□□□□□ -2.41
SQLE-202ENST00000518604 ANKRD50Q9ULJ7 1429 aa0□□□□□ -2.41
SQLE-202ENST00000518604 PRRC2CQ9Y520 2896 aaKnown RBP0□□□□□ -2.41
SQLE-202ENST00000518604 NBASA2RRP1 2371 aa-0.01□□□□□ -2.41
SQLE-202ENST00000518604 MAP1AP78559 2803 aaPredicted RBP-0.01□□□□□ -2.41
SQLE-202ENST00000518604 FLNBO75369 2602 aaKnown RBP-0.01□□□□□ -2.41
SQLE-202ENST00000518604 A0A087WXM4 84 aa-0.01□□□□□ -2.41
SQLE-202ENST00000518604 M0R2T5 61 aa-0.01□□□□□ -2.41
SQLE-202ENST00000518604 PCNX1Q96RV3 2341 aa-0.01□□□□□ -2.41
SQLE-202ENST00000518604 BPTFQ12830 3046 aa-0.01□□□□□ -2.41
SQLE-202ENST00000518604 STAB1Q9NY15 2570 aa-0.01□□□□□ -2.41
SQLE-202ENST00000518604 MADDQ8WXG6 1647 aa-0.02□□□□□ -2.41
SQLE-202ENST00000518604 ASXL1Q8IXJ9 1541 aa-0.02□□□□□ -2.41
SQLE-202ENST00000518604 VPS13BQ7Z7G8 4022 aa-0.02□□□□□ -2.41
SQLE-202ENST00000518604 SPRR2BP35325 72 aa-0.02□□□□□ -2.41
SQLE-202ENST00000518604 CREBBPQ92793 2442 aa-0.02□□□□□ -2.41
SQLE-202ENST00000518604 FLGP20930 4061 aaPredicted RBP-0.03□□□□□ -2.41
SQLE-202ENST00000518604 ZC3H13Q5T200 1668 aaKnown RBP-0.03□□□□□ -2.41
SQLE-202ENST00000518604 NHSQ6T4R5 1651 aa-0.03□□□□□ -2.41
SQLE-202ENST00000518604 DEPDC5O75140 1603 aa-0.04□□□□□ -2.42
SQLE-202ENST00000518604 DNAH9Q9NYC9 4486 aa-0.04□□□□□ -2.42
SQLE-202ENST00000518604 LOC730098B7Z3J9 87 aa-0.04□□□□□ -2.42
SQLE-202ENST00000518604 SMCO4Q9NRQ5 59 aa-0.04□□□□□ -2.42
SQLE-202ENST00000518604 ZANQ9Y493 2812 aa-0.04□□□□□ -2.42
SQLE-202ENST00000518604 DUOX2Q9NRD8 1548 aa-0.04□□□□□ -2.42
SQLE-202ENST00000518604 SVEP1Q4LDE5 3571 aa-0.05□□□□□ -2.42
SQLE-202ENST00000518604 DEFB135Q30KP9 77 aa-0.05□□□□□ -2.42
SQLE-202ENST00000518604 KCNQ1DNQ9H478 68 aa-0.05□□□□□ -2.42
SQLE-202ENST00000518604 HILPDAQ9Y5L2 63 aa-0.05□□□□□ -2.42
SQLE-202ENST00000518604 FAT3Q8TDW7 4589 aa-0.06□□□□□ -2.42
SQLE-202ENST00000518604 ZZEF1O43149 2961 aa-0.06□□□□□ -2.42
SQLE-202ENST00000518604 LINC00158P58513 81 aa-0.06□□□□□ -2.42
SQLE-202ENST00000518604 PRO3102Q9H379 93 aa-0.06□□□□□ -2.42
SQLE-202ENST00000518604 CUBNO60494 3623 aa-0.06□□□□□ -2.42
SQLE-202ENST00000518604 INO80Q9ULG1 1556 aaPredicted RBP-0.06□□□□□ -2.42
SQLE-202ENST00000518604 NF1P21359 2839 aa-0.07□□□□□ -2.42
SQLE-202ENST00000518604 RALGAPBQ86X10 1494 aa-0.07□□□□□ -2.42
SQLE-202ENST00000518604 SETD2Q9BYW2 2564 aaPredicted RBP-0.07□□□□□ -2.42
SQLE-202ENST00000518604 LYNX1G3V0Z9 82 aa-0.07□□□□□ -2.42
SQLE-202ENST00000518604 PDCD5O14737 125 aa-0.07□□□□□ -2.42
SQLE-202ENST00000518604 DEFA5Q01523 94 aa-0.07□□□□□ -2.42
SQLE-202ENST00000518604 ENHOQ6UWT2 76 aa-0.07□□□□□ -2.42
SQLE-202ENST00000518604 MUC2Q02817 5179 aa-0.07□□□□□ -2.42
SQLE-202ENST00000518604 HFM1A2PYH4 1435 aa-0.07□□□□□ -2.42
SQLE-202ENST00000518604 AKAP9Q99996 3911 aa-0.08□□□□□ -2.42
SQLE-202ENST00000518604 MROH1Q8NDA8 1641 aa-0.08□□□□□ -2.42
SQLE-202ENST00000518604 DEFB131BA0A096LNP1 70 aa-0.08□□□□□ -2.42
SQLE-202ENST00000518604 H3BVH4 76 aa-0.08□□□□□ -2.42
SQLE-202ENST00000518604 C3orf79P0CE67 100 aa-0.08□□□□□ -2.42
SQLE-202ENST00000518604 KRTAP6-2Q3LI66 62 aa-0.08□□□□□ -2.42
SQLE-202ENST00000518604 APOBP04114 4563 aaKnown RBP-0.08□□□□□ -2.42
SQLE-202ENST00000518604 THOC2Q8NI27 1593 aaKnown RBP-0.08□□□□□ -2.42
SQLE-202ENST00000518604 C3P01024 1663 aa-0.08□□□□□ -2.42
SQLE-202ENST00000518604 TGP01266 2768 aa-0.09□□□□□ -2.42
SQLE-202ENST00000518604 STAB2Q8WWQ8 2551 aa-0.09□□□□□ -2.42
SQLE-202ENST00000518604 NBPF19A0A087WUL8 3843 aa-0.09□□□□□ -2.42
SQLE-202ENST00000518604 CRIP1P50238 77 aa-0.09□□□□□ -2.42
SQLE-202ENST00000518604 ITSN2Q9NZM3 1697 aa-0.09□□□□□ -2.42
SQLE-202ENST00000518604 CEP290O15078 2479 aa-0.09□□□□□ -2.42
SQLE-202ENST00000518604 DNAH3Q8TD57 4116 aa-0.09□□□□□ -2.42
SQLE-202ENST00000518604 PDZD2O15018 2839 aa-0.09□□□□□ -2.42
SQLE-202ENST00000518604 EFCAB5A4FU69 1503 aa-0.1□□□□□ -2.43
SQLE-202ENST00000518604 ANK3Q12955 4377 aaKnown RBP-0.1□□□□□ -2.43
SQLE-202ENST00000518604 SPTBN4Q9H254 2564 aa-0.1□□□□□ -2.43
SQLE-202ENST00000518604 SONP18583 2426 aaKnown RBP-0.11□□□□□ -2.43
SQLE-202ENST00000518604 GLI2P10070 1586 aa-0.11□□□□□ -2.43
SQLE-202ENST00000518604 SACSQ9NZJ4 4579 aa-0.11□□□□□ -2.43
SQLE-202ENST00000518604 DEFB130BP0DP73 79 aa-0.11□□□□□ -2.43
SQLE-202ENST00000518604 DEFB130AP0DP74 79 aa-0.11□□□□□ -2.43
SQLE-202ENST00000518604 PKHD1L1Q86WI1 4243 aa-0.11□□□□□ -2.43
SQLE-202ENST00000518604 DNAH6Q9C0G6 4158 aa-0.11□□□□□ -2.43
SQLE-202ENST00000518604 VPS13DQ5THJ4 4388 aa-0.12□□□□□ -2.43
SQLE-202ENST00000518604 ABCA6Q8N139 1617 aa-0.12□□□□□ -2.43
SQLE-202ENST00000518604 NBEAL1Q6ZS30 2694 aa-0.12□□□□□ -2.43
SQLE-202ENST00000518604 IAPPP10997 89 aa-0.12□□□□□ -2.43
SQLE-202ENST00000518604 ATXN8Q156A1 80 aa-0.12□□□□□ -2.43
SQLE-202ENST00000518604 UBL5Q9BZL1 73 aa-0.12□□□□□ -2.43
SQLE-202ENST00000518604 DMXL1Q9Y485 3027 aa-0.12□□□□□ -2.43
SQLE-202ENST00000518604 SRRM2Q9UQ35 2752 aaKnown RBP-0.12□□□□□ -2.43
SQLE-202ENST00000518604 KIAA0586Q9BVV6 1533 aa-0.13□□□□□ -2.43
SQLE-202ENST00000518604 GCN1Q92616 2671 aaKnown RBP-0.13□□□□□ -2.43
SQLE-202ENST00000518604 PKD1L2Q7Z442 2459 aa-0.13□□□□□ -2.43
SQLE-202ENST00000518604 SPRR2AP35326 72 aa-0.13□□□□□ -2.43
SQLE-202ENST00000518604 MUC12Q9UKN1 5478 aa-0.13□□□□□ -2.43
SQLE-202ENST00000518604 CCDC180Q9P1Z9 1646 aa-0.13□□□□□ -2.43
SQLE-202ENST00000518604 EPG5Q9HCE0 2579 aa-0.13□□□□□ -2.43
SQLE-202ENST00000518604 ABCC6O95255 1503 aa-0.13□□□□□ -2.43
SQLE-202ENST00000518604 LAMA5O15230 3695 aa-0.14□□□□□ -2.43
SQLE-202ENST00000518604 SPG11Q96JI7 2443 aa-0.14□□□□□ -2.43
SQLE-202ENST00000518604 HTTP42858 3142 aa-0.14□□□□□ -2.43
SQLE-202ENST00000518604 TACC2O95359 2948 aa-0.14□□□□□ -2.43
SQLE-202ENST00000518604 ETDCA0A1B0GVM5 59 aa-0.14□□□□□ -2.43
SQLE-202ENST00000518604 DEFB114Q30KQ6 69 aa-0.14□□□□□ -2.43
SQLE-202ENST00000518604 KMT2CQ8NEZ4 4911 aaKnown RBP-0.14□□□□□ -2.43
SQLE-202ENST00000518604 DNAH11Q96DT5 4516 aa-0.15□□□□□ -2.43
SQLE-202ENST00000518604 MRPL33O75394 65 aaKnown RBP-0.15□□□□□ -2.43
SQLE-202ENST00000518604 FASNP49327 2511 aaKnown RBP-0.15□□□□□ -2.43
SQLE-202ENST00000518604 LY75O60449 1722 aa-0.16□□□□□ -2.43
SQLE-202ENST00000518604 ANKHD1Q8IWZ3 2542 aaKnown RBP-0.16□□□□□ -2.43
SQLE-202ENST00000518604 DNAH2Q9P225 4427 aa-0.16□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 114.8 ms