RNA–Protein interactions for RNA: ENST00000518585.1

CTNNA1-209, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-209ENST00000518585 GIG44P09565 113 aaPredicted RBP2.77□□□□□ -1.97
CTNNA1-209ENST00000518585 MP68P56378 58 aa2.77□□□□□ -1.97
CTNNA1-209ENST00000518585 LCE3AQ5TA76 89 aa2.77□□□□□ -1.97
CTNNA1-209ENST00000518585 Q75L30 129 aa2.77□□□□□ -1.97
CTNNA1-209ENST00000518585 LYSTQ99698 3801 aa2.77□□□□□ -1.97
CTNNA1-209ENST00000518585 SND1-IT1Q9HBX3 110 aa2.77□□□□□ -1.97
CTNNA1-209ENST00000518585 TENM3Q9P273 2699 aa2.77□□□□□ -1.97
CTNNA1-209ENST00000518585 CSMD3Q7Z407 3707 aa2.77□□□□□ -1.97
CTNNA1-209ENST00000518585 SACSQ9NZJ4 4579 aa2.77□□□□□ -1.97
CTNNA1-209ENST00000518585 HYDINQ4G0P3 5121 aa2.77□□□□□ -1.97
CTNNA1-209ENST00000518585 IGKV2-28A0A075B6P5 120 aa2.76□□□□□ -1.97
CTNNA1-209ENST00000518585 TRGV1A0A0A0MS02 117 aa2.76□□□□□ -1.97
CTNNA1-209ENST00000518585 IGHV4-28A0A0C4DH34 117 aa2.76□□□□□ -1.97
CTNNA1-209ENST00000518585 IGHV3-38A0A0C4DH36 116 aa2.76□□□□□ -1.97
CTNNA1-209ENST00000518585 A0A0J9YWU9 116 aa2.76□□□□□ -1.97
CTNNA1-209ENST00000518585 LOC101927531A0A1B0GV80 90 aa2.76□□□□□ -1.97
CTNNA1-209ENST00000518585 DEFB4AO15263 64 aa2.76□□□□□ -1.97
CTNNA1-209ENST00000518585 NDUFB1O75438 58 aa2.76□□□□□ -1.97
CTNNA1-209ENST00000518585 IGKV2D-28P01615 120 aa2.76□□□□□ -1.97
CTNNA1-209ENST00000518585 LINC01554Q52M75 96 aa2.76□□□□□ -1.97
CTNNA1-209ENST00000518585 LINC00337Q8N6G1 96 aa2.76□□□□□ -1.97
CTNNA1-209ENST00000518585 Q8N814 137 aa2.76□□□□□ -1.97
CTNNA1-209ENST00000518585 SPTSSBQ8NFR3 76 aa2.76□□□□□ -1.97
CTNNA1-209ENST00000518585 FAM104AQ969W3 186 aa2.76□□□□□ -1.97
CTNNA1-209ENST00000518585 NOP10Q9NPE3 64 aaKnown RBP2.76□□□□□ -1.97
CTNNA1-209ENST00000518585 CDC42SE1Q9NRR8 79 aa2.76□□□□□ -1.97
CTNNA1-209ENST00000518585 COL7A1Q02388 2944 aa2.75□□□□□ -1.97
CTNNA1-209ENST00000518585 TRGV2A0A075B6R0 118 aa2.75□□□□□ -1.97
CTNNA1-209ENST00000518585 IGHV3-73A0A0B4J1V6 119 aa2.75□□□□□ -1.97
CTNNA1-209ENST00000518585 SPART-AS1P0CW21 52 aa2.75□□□□□ -1.97
CTNNA1-209ENST00000518585 DEFB130BP0DP73 79 aa2.75□□□□□ -1.97
CTNNA1-209ENST00000518585 DEFB130AP0DP74 79 aa2.75□□□□□ -1.97
CTNNA1-209ENST00000518585 C9orf116Q5BN46 136 aaPredicted RBP2.75□□□□□ -1.97
CTNNA1-209ENST00000518585 Q6ZTI0 123 aa2.75□□□□□ -1.97
CTNNA1-209ENST00000518585 ZCCHC13Q8WW36 166 aaKnown RBP2.75□□□□□ -1.97
CTNNA1-209ENST00000518585 CDKN2A-AS1Q9UH64 79 aa2.75□□□□□ -1.97
CTNNA1-209ENST00000518585 STAB2Q8WWQ8 2551 aa2.74□□□□□ -1.97
CTNNA1-209ENST00000518585 PCLOQ9Y6V0 5065 aa2.74□□□□□ -1.97
CTNNA1-209ENST00000518585 K7EQD1 137 aa2.74□□□□□ -1.97
CTNNA1-209ENST00000518585 IGHV3-53P01767 116 aa2.74□□□□□ -1.97
CTNNA1-209ENST00000518585 LINC00313P59037 77 aa2.74□□□□□ -1.97
CTNNA1-209ENST00000518585 NTM-AS1Q6ZSK4 140 aa2.74□□□□□ -1.97
CTNNA1-209ENST00000518585 Q8NAQ8 132 aa2.74□□□□□ -1.97
CTNNA1-209ENST00000518585 HIGD2AQ9BW72 106 aa2.74□□□□□ -1.97
CTNNA1-209ENST00000518585 CDC42SE2Q9NRR3 84 aa2.74□□□□□ -1.97
CTNNA1-209ENST00000518585 DNAH1Q9P2D7 4330 aa2.74□□□□□ -1.97
CTNNA1-209ENST00000518585 TRGV4A0A0C4DH28 118 aa2.73□□□□□ -1.97
CTNNA1-209ENST00000518585 TRBV6-4A0A1B0GX49 114 aa2.73□□□□□ -1.97
CTNNA1-209ENST00000518585 LRCOL1A6NCL2 159 aa2.73□□□□□ -1.97
CTNNA1-209ENST00000518585 A6NED7 52 aa2.73□□□□□ -1.97
CTNNA1-209ENST00000518585 SMIM1B2RUZ4 78 aa2.73□□□□□ -1.97
CTNNA1-209ENST00000518585 HTN3P15516 51 aa2.73□□□□□ -1.97
CTNNA1-209ENST00000518585 Q9BRP9 147 aa2.73□□□□□ -1.97
CTNNA1-209ENST00000518585 CELA1Q9UNI1 258 aa2.73□□□□□ -1.97
CTNNA1-209ENST00000518585 TENM2Q9NT68 2774 aa2.72□□□□□ -1.97
CTNNA1-209ENST00000518585 ALMS1Q8TCU4 4167 aa2.72□□□□□ -1.97
CTNNA1-209ENST00000518585 RYR1P21817 5038 aa2.72□□□□□ -1.97
CTNNA1-209ENST00000518585 NUPR2A6NF83 97 aa2.72□□□□□ -1.97
CTNNA1-209ENST00000518585 CCL18P55774 89 aa2.72□□□□□ -1.97
CTNNA1-209ENST00000518585 MOBPQ13875 183 aa2.72□□□□□ -1.97
CTNNA1-209ENST00000518585 LINC00242Q5T6M2 205 aa2.72□□□□□ -1.97
CTNNA1-209ENST00000518585 LINC00612Q8N6U2 182 aa2.72□□□□□ -1.97
CTNNA1-209ENST00000518585 SPANXA2-OT1Q8N9U9 137 aa2.72□□□□□ -1.97
CTNNA1-209ENST00000518585 PRR15LQ9BU68 103 aa2.72□□□□□ -1.97
CTNNA1-209ENST00000518585 CHCHD7Q9BUK0 85 aa2.72□□□□□ -1.97
CTNNA1-209ENST00000518585 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.71□□□□□ -1.98
CTNNA1-209ENST00000518585 DEFB131BA0A096LNP1 70 aa2.71□□□□□ -1.98
CTNNA1-209ENST00000518585 A0A1B0GW54 56 aa2.71□□□□□ -1.98
CTNNA1-209ENST00000518585 A8MU10 97 aa2.71□□□□□ -1.98
CTNNA1-209ENST00000518585 H0Y9J4 135 aa2.71□□□□□ -1.98
CTNNA1-209ENST00000518585 IGKV4-1P06312 121 aa2.71□□□□□ -1.98
CTNNA1-209ENST00000518585 LINC00158P58513 81 aa2.71□□□□□ -1.98
CTNNA1-209ENST00000518585 RNASE13Q5GAN3 156 aaKnown RBP2.71□□□□□ -1.98
CTNNA1-209ENST00000518585 LINC00575Q6W349 94 aa2.71□□□□□ -1.98
CTNNA1-209ENST00000518585 DEFB104AQ8WTQ1 72 aa2.71□□□□□ -1.98
CTNNA1-209ENST00000518585 IGHV3OR16-9A0A0B4J2B5 98 aa2.7□□□□□ -1.98
CTNNA1-209ENST00000518585 ETDCA0A1B0GVM5 59 aa2.7□□□□□ -1.98
CTNNA1-209ENST00000518585 LY6G6CO95867 125 aa2.7□□□□□ -1.98
CTNNA1-209ENST00000518585 COX6A2Q02221 97 aa2.7□□□□□ -1.98
CTNNA1-209ENST00000518585 CASC2Q6XLA1 102 aa2.7□□□□□ -1.98
CTNNA1-209ENST00000518585 COX7B2Q8TF08 81 aa2.7□□□□□ -1.98
CTNNA1-209ENST00000518585 LINC00208Q96KT6 92 aa2.7□□□□□ -1.98
CTNNA1-209ENST00000518585 PRO0255Q9UI72 69 aa2.7□□□□□ -1.98
CTNNA1-209ENST00000518585 DNAH6Q9C0G6 4158 aa2.7□□□□□ -1.98
CTNNA1-209ENST00000518585 A0A096LPF7 62 aa2.69□□□□□ -1.98
CTNNA1-209ENST00000518585 H3BPC8 53 aa2.69□□□□□ -1.98
CTNNA1-209ENST00000518585 KRTAP13-3Q3SY46 172 aa2.69□□□□□ -1.98
CTNNA1-209ENST00000518585 KMT2AQ03164 3969 aa2.69□□□□□ -1.98
CTNNA1-209ENST00000518585 VPS13DQ5THJ4 4388 aa2.68□□□□□ -1.98
CTNNA1-209ENST00000518585 COX7BP24311 80 aa2.68□□□□□ -1.98
CTNNA1-209ENST00000518585 PRR3P79522 188 aaKnown RBP2.68□□□□□ -1.98
CTNNA1-209ENST00000518585 SCXQ7RTU7 201 aa2.68□□□□□ -1.98
CTNNA1-209ENST00000518585 APLNQ9ULZ1 77 aa2.68□□□□□ -1.98
CTNNA1-209ENST00000518585 LINC01558Q9Y6Z2 57 aa2.68□□□□□ -1.98
CTNNA1-209ENST00000518585 HECTD4Q9Y4D8 3996 aa2.68□□□□□ -1.98
CTNNA1-209ENST00000518585 DNAH10Q8IVF4 4471 aa2.68□□□□□ -1.98
CTNNA1-209ENST00000518585 DNAH2Q9P225 4427 aa2.67□□□□□ -1.98
CTNNA1-209ENST00000518585 FRAS1Q86XX4 4008 aa2.67□□□□□ -1.98
CTNNA1-209ENST00000518585 IGLV4-60A0A075B6I1 120 aa2.67□□□□□ -1.98
CTNNA1-209ENST00000518585 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.67□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms