RNA–Protein interactions for RNA: ENST00000518293.5

PABPC1-206, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 608 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-206ENST00000518293 SSPOA2VEC9 5147 aa1.53□□□□□ -2.16
PABPC1-206ENST00000518293 LINC00587B1AMM8 73 aa1.53□□□□□ -2.16
PABPC1-206ENST00000518293 D6R8Y8 96 aa1.53□□□□□ -2.16
PABPC1-206ENST00000518293 HINT1P49773 126 aaPredicted RBP1.53□□□□□ -2.16
PABPC1-206ENST00000518293 RPL37P61927 97 aaKnown RBP1.53□□□□□ -2.16
PABPC1-206ENST00000518293 Q5BKY6 102 aa1.53□□□□□ -2.16
PABPC1-206ENST00000518293 C10orf91Q5T1B1 145 aa1.53□□□□□ -2.16
PABPC1-206ENST00000518293 C1orf195Q5TG92 126 aa1.53□□□□□ -2.16
PABPC1-206ENST00000518293 FA2HQ7L5A8 372 aa1.53□□□□□ -2.16
PABPC1-206ENST00000518293 Q8N8P6 123 aa1.53□□□□□ -2.16
PABPC1-206ENST00000518293 PRELID3AQ96N28 172 aa1.53□□□□□ -2.16
PABPC1-206ENST00000518293 NXT2Q9NPJ8 142 aaKnown RBP1.53□□□□□ -2.16
PABPC1-206ENST00000518293 FCGBPQ9Y6R7 5405 aaPredicted RBP1.52□□□□□ -2.17
PABPC1-206ENST00000518293 SCO1O75880 301 aa1.52□□□□□ -2.17
PABPC1-206ENST00000518293 NPYP01303 97 aa1.52□□□□□ -2.17
PABPC1-206ENST00000518293 LINC00158P58513 81 aa1.52□□□□□ -2.17
PABPC1-206ENST00000518293 ATP5L2Q7Z4Y8 100 aa1.52□□□□□ -2.17
PABPC1-206ENST00000518293 SCGB3A1Q96QR1 104 aa1.52□□□□□ -2.17
PABPC1-206ENST00000518293 LAMTOR3Q9UHA4 124 aa1.52□□□□□ -2.17
PABPC1-206ENST00000518293 SMIM27A0A1W2PRY6 76 aa1.51□□□□□ -2.17
PABPC1-206ENST00000518293 IGIPA6NJ69 53 aa1.51□□□□□ -2.17
PABPC1-206ENST00000518293 H7C2G1 150 aa1.51□□□□□ -2.17
PABPC1-206ENST00000518293 TCL1BO95988 128 aa1.51□□□□□ -2.17
PABPC1-206ENST00000518293 SPINK8P0C7L1 97 aa1.51□□□□□ -2.17
PABPC1-206ENST00000518293 MP68P56378 58 aa1.51□□□□□ -2.17
PABPC1-206ENST00000518293 LINC00313P59037 77 aa1.51□□□□□ -2.17
PABPC1-206ENST00000518293 PRO1933Q9H354 126 aa1.51□□□□□ -2.17
PABPC1-206ENST00000518293 KCNQ1DNQ9H478 68 aa1.51□□□□□ -2.17
PABPC1-206ENST00000518293 SPANXB1Q9NS25 103 aaPredicted RBP1.51□□□□□ -2.17
PABPC1-206ENST00000518293 V9GYV3 84 aa1.51□□□□□ -2.17
PABPC1-206ENST00000518293 FAM236DA0A1B0GTK5 79 aa1.5□□□□□ -2.17
PABPC1-206ENST00000518293 FAM236CP0DP71 79 aa1.5□□□□□ -2.17
PABPC1-206ENST00000518293 HRES1P13985 223 aa1.5□□□□□ -2.17
PABPC1-206ENST00000518293 S100A2P29034 98 aa1.5□□□□□ -2.17
PABPC1-206ENST00000518293 SPRR1AP35321 89 aa1.5□□□□□ -2.17
PABPC1-206ENST00000518293 IFITM2Q01629 132 aa1.5□□□□□ -2.17
PABPC1-206ENST00000518293 ADIRFQ15847 76 aa1.5□□□□□ -2.17
PABPC1-206ENST00000518293 KRTAP20-1Q3LI63 56 aa1.5□□□□□ -2.17
PABPC1-206ENST00000518293 Q5XG85 94 aa1.5□□□□□ -2.17
PABPC1-206ENST00000518293 MRPL54Q6P161 138 aaKnown RBP1.5□□□□□ -2.17
PABPC1-206ENST00000518293 Q6ZRX8 168 aa1.5□□□□□ -2.17
PABPC1-206ENST00000518293 SLC51BQ86UW2 128 aa1.5□□□□□ -2.17
PABPC1-206ENST00000518293 TOMM6Q96B49 74 aa1.5□□□□□ -2.17
PABPC1-206ENST00000518293 MIEN1Q9BRT3 115 aa1.5□□□□□ -2.17
PABPC1-206ENST00000518293 ANAPC13Q9BS18 74 aa1.5□□□□□ -2.17
PABPC1-206ENST00000518293 USH2AO75445 5202 aa1.49□□□□□ -2.17
PABPC1-206ENST00000518293 TRBV10-3A0A0K0K1G6 114 aa1.49□□□□□ -2.17
PABPC1-206ENST00000518293 TRBV10-2A0A0K0K1G8 114 aa1.49□□□□□ -2.17
PABPC1-206ENST00000518293 LINC00614P0C842 121 aa1.49□□□□□ -2.17
PABPC1-206ENST00000518293 DDTP30046 118 aa1.49□□□□□ -2.17
PABPC1-206ENST00000518293 AKR1D1P51857 326 aa1.49□□□□□ -2.17
PABPC1-206ENST00000518293 MEIG1Q5JSS6 88 aa1.49□□□□□ -2.17
PABPC1-206ENST00000518293 S100A7L2Q5SY68 101 aa1.49□□□□□ -2.17
PABPC1-206ENST00000518293 HRCT1Q6UXD1 115 aa1.49□□□□□ -2.17
PABPC1-206ENST00000518293 ZNF625Q96I27 306 aaPredicted RBP1.49□□□□□ -2.17
PABPC1-206ENST00000518293 CST9LQ9H4G1 147 aa1.49□□□□□ -2.17
PABPC1-206ENST00000518293 NAT8Q9UHE5 227 aa1.49□□□□□ -2.17
PABPC1-206ENST00000518293 MACF1Q9UPN3 7388 aaKnown RBP1.49□□□□□ -2.17
PABPC1-206ENST00000518293 NCR3O14931 201 aa1.48□□□□□ -2.17
PABPC1-206ENST00000518293 NDUFA6P56556 154 aa1.48□□□□□ -2.17
PABPC1-206ENST00000518293 KRTAP19-6Q3LI70 58 aa1.48□□□□□ -2.17
PABPC1-206ENST00000518293 TMEM170BQ5T4T1 132 aa1.48□□□□□ -2.17
PABPC1-206ENST00000518293 YPEL4Q96NS1 127 aa1.48□□□□□ -2.17
PABPC1-206ENST00000518293 Q9BRP9 147 aa1.48□□□□□ -2.17
PABPC1-206ENST00000518293 SMCO4Q9NRQ5 59 aa1.48□□□□□ -2.17
PABPC1-206ENST00000518293 TRAV23DV6A0A075B6W5 121 aa1.47□□□□□ -2.17
PABPC1-206ENST00000518293 MYMXA0A1B0GTQ4 84 aa1.47□□□□□ -2.17
PABPC1-206ENST00000518293 LOC105371267A0A1B0GV96 52 aa1.47□□□□□ -2.17
PABPC1-206ENST00000518293 ZNF815PA8K554 130 aa1.47□□□□□ -2.17
PABPC1-206ENST00000518293 ERC2-IT1O76042 136 aa1.47□□□□□ -2.17
PABPC1-206ENST00000518293 MT2AP02795 61 aa1.47□□□□□ -2.17
PABPC1-206ENST00000518293 MT-ND4LP03901 98 aa1.47□□□□□ -2.17
PABPC1-206ENST00000518293 SRP19P09132 144 aaKnown RBP1.47□□□□□ -2.17
PABPC1-206ENST00000518293 IGLC3P0DOY3 106 aa1.47□□□□□ -2.17
PABPC1-206ENST00000518293 SPRR1BP22528 89 aa1.47□□□□□ -2.17
PABPC1-206ENST00000518293 PEA15Q15121 130 aa1.47□□□□□ -2.17
PABPC1-206ENST00000518293 C20orf166-AS1Q96NR2 134 aa1.47□□□□□ -2.17
PABPC1-206ENST00000518293 R4GN34 69 aa1.47□□□□□ -2.17
PABPC1-206ENST00000518293 TEX49A0A1B0GTD5 131 aa1.46□□□□□ -2.18
PABPC1-206ENST00000518293 F8WEM9 126 aa1.46□□□□□ -2.18
PABPC1-206ENST00000518293 ZNF73O43830 326 aaPredicted RBP1.46□□□□□ -2.18
PABPC1-206ENST00000518293 NDUFC2O95298 119 aa1.46□□□□□ -2.18
PABPC1-206ENST00000518293 SMIM13P0DJ93 91 aa1.46□□□□□ -2.18
PABPC1-206ENST00000518293 SCGB1C2P0DMR2 95 aa1.46□□□□□ -2.18
PABPC1-206ENST00000518293 ZNF22P17026 224 aaPredicted RBP1.46□□□□□ -2.18
PABPC1-206ENST00000518293 PMAIP1Q13794 54 aa1.46□□□□□ -2.18
PABPC1-206ENST00000518293 SCGB1D4Q6XE38 83 aa1.46□□□□□ -2.18
PABPC1-206ENST00000518293 SYNE2Q8WXH0 6885 aaKnown RBP1.45□□□□□ -2.18
PABPC1-206ENST00000518293 LOC107984156A0A0G2JMH3 177 aa1.45□□□□□ -2.18
PABPC1-206ENST00000518293 A8MWP4 228 aa1.45□□□□□ -2.18
PABPC1-206ENST00000518293 HBDP02042 147 aa1.45□□□□□ -2.18
PABPC1-206ENST00000518293 ADCYAP1P18509 176 aa1.45□□□□□ -2.18
PABPC1-206ENST00000518293 RHEBQ15382 184 aa1.45□□□□□ -2.18
PABPC1-206ENST00000518293 BAGE3Q86Y29 109 aa1.45□□□□□ -2.18
PABPC1-206ENST00000518293 ARL17AQ8IVW1 177 aa1.45□□□□□ -2.18
PABPC1-206ENST00000518293 TCTE3Q8IZS6 198 aa1.45□□□□□ -2.18
PABPC1-206ENST00000518293 Q8NDZ9 215 aa1.45□□□□□ -2.18
PABPC1-206ENST00000518293 DEFB105AQ8NG35 78 aa1.45□□□□□ -2.18
PABPC1-206ENST00000518293 Q96NJ1 140 aa1.45□□□□□ -2.18
PABPC1-206ENST00000518293 SIGMAR1Q99720 223 aa1.45□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 124.9 ms