RNA–Protein interactions for RNA: ENST00000518196.5

PABPC1-205, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 631 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-205ENST00000518196 ANAPC11Q9NYG5 84 aa7.74□□□□□ -1.17
PABPC1-205ENST00000518196 A0A1B0GX51 115 aa7.72□□□□□ -1.17
PABPC1-205ENST00000518196 LINC00483Q53H64 154 aa7.72□□□□□ -1.17
PABPC1-205ENST00000518196 PRR26Q8N8Z3 221 aa7.72□□□□□ -1.17
PABPC1-205ENST00000518196 DEFB105AQ8NG35 78 aa7.72□□□□□ -1.17
PABPC1-205ENST00000518196 KRTAP4-8A0A0G2JLE6 195 aa7.71□□□□□ -1.18
PABPC1-205ENST00000518196 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.71□□□□□ -1.18
PABPC1-205ENST00000518196 SNHG12Q9BXW3 62 aa7.71□□□□□ -1.18
PABPC1-205ENST00000518196 TEX49A0A1B0GTD5 131 aa7.7□□□□□ -1.18
PABPC1-205ENST00000518196 Q6ZQY7 126 aa7.7□□□□□ -1.18
PABPC1-205ENST00000518196 CLEC2BQ92478 149 aa7.7□□□□□ -1.18
PABPC1-205ENST00000518196 FAM218AQ96MZ4 157 aa7.7□□□□□ -1.18
PABPC1-205ENST00000518196 KRTAP9-3Q9BYQ3 159 aa7.7□□□□□ -1.18
PABPC1-205ENST00000518196 A0A087X002 238 aa7.69□□□□□ -1.18
PABPC1-205ENST00000518196 SPRR1BP22528 89 aa7.69□□□□□ -1.18
PABPC1-205ENST00000518196 IGLV5-48A0A075B6I7 105 aa7.68□□□□□ -1.18
PABPC1-205ENST00000518196 KRTAP10-8P60410 259 aa7.68□□□□□ -1.18
PABPC1-205ENST00000518196 OCIAD2Q56VL3 154 aa7.68□□□□□ -1.18
PABPC1-205ENST00000518196 COL5A1-AS1Q5SY13 56 aa7.68□□□□□ -1.18
PABPC1-205ENST00000518196 LYRM7Q5U5X0 104 aa7.68□□□□□ -1.18
PABPC1-205ENST00000518196 TYMSOSQ8TAI1 123 aa7.68□□□□□ -1.18
PABPC1-205ENST00000518196 NAA38Q9BRA0 125 aaKnown RBP7.68□□□□□ -1.18
PABPC1-205ENST00000518196 LAMTOR3Q9UHA4 124 aa7.68□□□□□ -1.18
PABPC1-205ENST00000518196 FAT3Q8TDW7 4589 aa7.68□□□□□ -1.18
PABPC1-205ENST00000518196 TAX1BP3O14907 124 aa7.67□□□□□ -1.18
PABPC1-205ENST00000518196 DNAL4O96015 105 aa7.67□□□□□ -1.18
PABPC1-205ENST00000518196 LINC01547P58512 204 aaPredicted RBP7.67□□□□□ -1.18
PABPC1-205ENST00000518196 LCE1DQ5T752 114 aa7.67□□□□□ -1.18
PABPC1-205ENST00000518196 H3BUT2 72 aa7.66□□□□□ -1.18
PABPC1-205ENST00000518196 MT1HL1P0DM35 61 aa7.66□□□□□ -1.18
PABPC1-205ENST00000518196 KRTAP13-2Q52LG2 175 aa7.66□□□□□ -1.18
PABPC1-205ENST00000518196 Q8N377 158 aa7.66□□□□□ -1.18
PABPC1-205ENST00000518196 C3orf22Q8N5N4 141 aa7.66□□□□□ -1.18
PABPC1-205ENST00000518196 PPDPFLQ8WWR9 84 aa7.66□□□□□ -1.18
PABPC1-205ENST00000518196 MYCBP2O75592 4640 aa7.66□□□□□ -1.18
PABPC1-205ENST00000518196 LRP1Q07954 4544 aaKnown RBP7.65□□□□□ -1.18
PABPC1-205ENST00000518196 IGLV9-49A0A0B4J1Y8 123 aa7.65□□□□□ -1.18
PABPC1-205ENST00000518196 H3BQ85 93 aa7.64□□□□□ -1.19
PABPC1-205ENST00000518196 LST1O00453 97 aa7.64□□□□□ -1.19
PABPC1-205ENST00000518196 TRACP01848 142 aa7.64□□□□□ -1.19
PABPC1-205ENST00000518196 C9orf153Q5TBE3 101 aa7.64□□□□□ -1.19
PABPC1-205ENST00000518196 ATXN8Q156A1 80 aa7.63□□□□□ -1.19
PABPC1-205ENST00000518196 SSBP3-AS1Q7Z2R9 100 aa7.63□□□□□ -1.19
PABPC1-205ENST00000518196 ORMDL1Q9P0S3 153 aa7.63□□□□□ -1.19
PABPC1-205ENST00000518196 PCLOQ9Y6V0 5065 aa7.62□□□□□ -1.19
PABPC1-205ENST00000518196 TRBV20-1A0A075B6N2 111 aa7.62□□□□□ -1.19
PABPC1-205ENST00000518196 F8WEM9 126 aa7.62□□□□□ -1.19
PABPC1-205ENST00000518196 MOBPQ13875 183 aa7.62□□□□□ -1.19
PABPC1-205ENST00000518196 SMIM29Q86T20 159 aa7.62□□□□□ -1.19
PABPC1-205ENST00000518196 A0A1W2PPM0 123 aa7.61□□□□□ -1.19
PABPC1-205ENST00000518196 TCL1BO95988 128 aa7.61□□□□□ -1.19
PABPC1-205ENST00000518196 FABP2P12104 132 aa7.61□□□□□ -1.19
PABPC1-205ENST00000518196 Q8NBF4 154 aa7.61□□□□□ -1.19
PABPC1-205ENST00000518196 TMEM256-PLSCR3K7ERE1 68 aa7.59□□□□□ -1.19
PABPC1-205ENST00000518196 LINC00304Q8N9R0 145 aa7.59□□□□□ -1.19
PABPC1-205ENST00000518196 NDUFV3P56181 108 aaKnown RBP7.57□□□□□ -1.2
PABPC1-205ENST00000518196 SPAG11AQ6PDA7 123 aa7.57□□□□□ -1.2
PABPC1-205ENST00000518196 TNXBP22105 4242 aa7.56□□□□□ -1.2
PABPC1-205ENST00000518196 BAALC-AS2P0C853 105 aa7.55□□□□□ -1.2
PABPC1-205ENST00000518196 DMBT1Q9UGM3 2413 aaPredicted RBP7.54□□□□□ -1.2
PABPC1-205ENST00000518196 IGLV8-61A0A075B6I0 122 aa7.54□□□□□ -1.2
PABPC1-205ENST00000518196 UBE2V1Q13404 147 aa7.54□□□□□ -1.2
PABPC1-205ENST00000518196 Q6JHZ5 121 aa7.54□□□□□ -1.2
PABPC1-205ENST00000518196 SPCS1Q9Y6A9 102 aa7.54□□□□□ -1.2
PABPC1-205ENST00000518196 C9JAW5 83 aa7.52□□□□□ -1.21
PABPC1-205ENST00000518196 H3BMG7 143 aa7.52□□□□□ -1.21
PABPC1-205ENST00000518196 SPINK1P00995 79 aa7.52□□□□□ -1.21
PABPC1-205ENST00000518196 LCE5AQ5TCM9 118 aa7.51□□□□□ -1.21
PABPC1-205ENST00000518196 CD164Q04900 197 aa7.5□□□□□ -1.21
PABPC1-205ENST00000518196 KRTAP15-1Q3LI76 137 aa7.5□□□□□ -1.21
PABPC1-205ENST00000518196 ANKRD29Q8N6D5 301 aa7.5□□□□□ -1.21
PABPC1-205ENST00000518196 IGFL1Q6UW32 110 aa7.49□□□□□ -1.21
PABPC1-205ENST00000518196 HRCT1Q6UXD1 115 aa7.49□□□□□ -1.21
PABPC1-205ENST00000518196 K7EP34 96 aa7.48□□□□□ -1.21
PABPC1-205ENST00000518196 PCP4P48539 62 aa7.48□□□□□ -1.21
PABPC1-205ENST00000518196 RPS29P62273 56 aaKnown RBP7.48□□□□□ -1.21
PABPC1-205ENST00000518196 GTF2H5Q6ZYL4 71 aa7.48□□□□□ -1.21
PABPC1-205ENST00000518196 A0A0G2JQZ4 141 aa7.47□□□□□ -1.21
PABPC1-205ENST00000518196 A0A1B0GV72 72 aa7.47□□□□□ -1.21
PABPC1-205ENST00000518196 H3BT86 120 aa7.47□□□□□ -1.21
PABPC1-205ENST00000518196 RBM3P98179 157 aaKnown RBP7.46□□□□□ -1.22
PABPC1-205ENST00000518196 LIMD2Q9BT23 127 aa7.46□□□□□ -1.22
PABPC1-205ENST00000518196 JMJD7-PLA2G4BH0Y9G9 81 aa7.45□□□□□ -1.22
PABPC1-205ENST00000518196 MTURNQ8N3F0 131 aa7.44□□□□□ -1.22
PABPC1-205ENST00000518196 DSCR8Q96T75 97 aa7.44□□□□□ -1.22
PABPC1-205ENST00000518196 TEN1Q86WV5 123 aa7.43□□□□□ -1.22
PABPC1-205ENST00000518196 Q6Q795 121 aa7.42□□□□□ -1.22
PABPC1-205ENST00000518196 TRBV7-4A0A0J9YYF1 115 aa7.41□□□□□ -1.22
PABPC1-205ENST00000518196 TRBV7-7A0A0K0K1E9 115 aa7.41□□□□□ -1.22
PABPC1-205ENST00000518196 Q5XG85 94 aa7.4□□□□□ -1.22
PABPC1-205ENST00000518196 KRTAP4-7Q9BYR0 210 aa7.4□□□□□ -1.22
PABPC1-205ENST00000518196 CCKP06307 115 aa7.39□□□□□ -1.23
PABPC1-205ENST00000518196 A0A1W2PNM2 257 aa7.38□□□□□ -1.23
PABPC1-205ENST00000518196 PDE6GP18545 87 aa7.38□□□□□ -1.23
PABPC1-205ENST00000518196 PRR4Q16378 134 aa7.38□□□□□ -1.23
PABPC1-205ENST00000518196 OBSCN-AS1Q96MR7 158 aa7.38□□□□□ -1.23
PABPC1-205ENST00000518196 RETNLBQ9BQ08 111 aa7.38□□□□□ -1.23
PABPC1-205ENST00000518196 PRO0461Q9UI25 63 aa7.38□□□□□ -1.23
PABPC1-205ENST00000518196 F8W1H4 67 aa7.37□□□□□ -1.23
PABPC1-205ENST00000518196 VPS25Q9BRG1 176 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 275.5 ms