RNA–Protein interactions for RNA: ENST00000517352.1

TNFRSF11B-202, Transcript of TNF receptor superfamily member 11b, humanhuman

TSL 1 (best)

Gene TNFRSF11B, Length 1,144 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11B-202ENST00000517352 BRK1Q8WUW1 75 aa4.21□□□□□ -1.74
TNFRSF11B-202ENST00000517352 MYMXA0A1B0GTQ4 84 aa4.2□□□□□ -1.74
TNFRSF11B-202ENST00000517352 SLC25A20O43772 301 aa4.2□□□□□ -1.74
TNFRSF11B-202ENST00000517352 FABP2P12104 132 aa4.2□□□□□ -1.74
TNFRSF11B-202ENST00000517352 NDUFV3P56181 108 aaKnown RBP4.2□□□□□ -1.74
TNFRSF11B-202ENST00000517352 SVBPQ8N300 66 aa4.2□□□□□ -1.74
TNFRSF11B-202ENST00000517352 MIR7-3HGQ8N6C7 128 aa4.2□□□□□ -1.74
TNFRSF11B-202ENST00000517352 MPLKIPQ8TAP9 179 aa4.2□□□□□ -1.74
TNFRSF11B-202ENST00000517352 KRTAP9-8Q9BYQ0 159 aa4.2□□□□□ -1.74
TNFRSF11B-202ENST00000517352 MUC17Q685J3 4493 aa4.2□□□□□ -1.74
TNFRSF11B-202ENST00000517352 FAM236AA0A1B0GUQ0 79 aa4.19□□□□□ -1.74
TNFRSF11B-202ENST00000517352 FAM236BA0A1B0GV22 79 aa4.19□□□□□ -1.74
TNFRSF11B-202ENST00000517352 LST1O00453 97 aa4.19□□□□□ -1.74
TNFRSF11B-202ENST00000517352 C18orf32Q8TCD1 76 aa4.19□□□□□ -1.74
TNFRSF11B-202ENST00000517352 VAMP8Q9BV40 100 aa4.19□□□□□ -1.74
TNFRSF11B-202ENST00000517352 TRBV7-6A0A0J9YX20 115 aa4.18□□□□□ -1.74
TNFRSF11B-202ENST00000517352 TRBV10-3A0A0K0K1G6 114 aa4.18□□□□□ -1.74
TNFRSF11B-202ENST00000517352 A8MUN3 132 aa4.18□□□□□ -1.74
TNFRSF11B-202ENST00000517352 TAX1BP3O14907 124 aa4.18□□□□□ -1.74
TNFRSF11B-202ENST00000517352 IFITM1P13164 125 aa4.18□□□□□ -1.74
TNFRSF11B-202ENST00000517352 LGALS3P17931 250 aaKnown RBP4.18□□□□□ -1.74
TNFRSF11B-202ENST00000517352 TMEM258P61165 79 aa4.18□□□□□ -1.74
TNFRSF11B-202ENST00000517352 HERVK_113P61574 105 aa4.18□□□□□ -1.74
TNFRSF11B-202ENST00000517352 SSBP3-AS1Q7Z2R9 100 aa4.18□□□□□ -1.74
TNFRSF11B-202ENST00000517352 IFI27L1Q96BM0 104 aa4.18□□□□□ -1.74
TNFRSF11B-202ENST00000517352 TMEM223A0PJW6 202 aa4.17□□□□□ -1.74
TNFRSF11B-202ENST00000517352 ZNF73O43830 326 aaPredicted RBP4.17□□□□□ -1.74
TNFRSF11B-202ENST00000517352 APOC3P02656 99 aa4.17□□□□□ -1.74
TNFRSF11B-202ENST00000517352 LINC00313P59037 77 aa4.17□□□□□ -1.74
TNFRSF11B-202ENST00000517352 KRTAP13-3Q3SY46 172 aa4.17□□□□□ -1.74
TNFRSF11B-202ENST00000517352 ASB16-AS1Q495Z4 193 aa4.17□□□□□ -1.74
TNFRSF11B-202ENST00000517352 SLC25A34Q6PIV7 304 aa4.17□□□□□ -1.74
TNFRSF11B-202ENST00000517352 COPS9Q8WXC6 57 aa4.17□□□□□ -1.74
TNFRSF11B-202ENST00000517352 KCNQ1DNQ9H478 68 aa4.17□□□□□ -1.74
TNFRSF11B-202ENST00000517352 TRAV12-1A0A0B4J245 112 aa4.16□□□□□ -1.74
TNFRSF11B-202ENST00000517352 LCA10Q71F78 164 aa4.16□□□□□ -1.74
TNFRSF11B-202ENST00000517352 Q8NDZ9 215 aa4.16□□□□□ -1.74
TNFRSF11B-202ENST00000517352 CHCHD1Q96BP2 118 aaKnown RBP4.16□□□□□ -1.74
TNFRSF11B-202ENST00000517352 A0A096LNJ9 63 aa4.15□□□□□ -1.75
TNFRSF11B-202ENST00000517352 H3BMG7 143 aa4.15□□□□□ -1.75
TNFRSF11B-202ENST00000517352 PRAC1Q96KF2 57 aa4.15□□□□□ -1.75
TNFRSF11B-202ENST00000517352 LIMD2Q9BT23 127 aa4.15□□□□□ -1.75
TNFRSF11B-202ENST00000517352 OCR1Q9BZK8 76 aa4.15□□□□□ -1.75
TNFRSF11B-202ENST00000517352 FSIP2Q5CZC0 6907 aa4.14□□□□□ -1.75
TNFRSF11B-202ENST00000517352 TRAV23DV6A0A075B6W5 121 aa4.14□□□□□ -1.75
TNFRSF11B-202ENST00000517352 TRBV10-2A0A0K0K1G8 114 aa4.14□□□□□ -1.75
TNFRSF11B-202ENST00000517352 SPRR1AP35321 89 aa4.14□□□□□ -1.75
TNFRSF11B-202ENST00000517352 RPS29P62273 56 aaKnown RBP4.14□□□□□ -1.75
TNFRSF11B-202ENST00000517352 LINC00483Q53H64 154 aa4.14□□□□□ -1.75
TNFRSF11B-202ENST00000517352 LEPROTL1O95214 131 aa4.13□□□□□ -1.75
TNFRSF11B-202ENST00000517352 HIST1H2BOP23527 126 aa4.13□□□□□ -1.75
TNFRSF11B-202ENST00000517352 PLNP26678 52 aa4.13□□□□□ -1.75
TNFRSF11B-202ENST00000517352 HIST1H2BBP33778 126 aa4.13□□□□□ -1.75
TNFRSF11B-202ENST00000517352 HIST1H2BDP58876 126 aa4.13□□□□□ -1.75
TNFRSF11B-202ENST00000517352 HIST1H2BCP62807 126 aa4.13□□□□□ -1.75
TNFRSF11B-202ENST00000517352 HIST2H2BEQ16778 126 aa4.13□□□□□ -1.75
TNFRSF11B-202ENST00000517352 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.13□□□□□ -1.75
TNFRSF11B-202ENST00000517352 Q6ZRX8 168 aa4.13□□□□□ -1.75
TNFRSF11B-202ENST00000517352 Q8N377 158 aa4.13□□□□□ -1.75
TNFRSF11B-202ENST00000517352 HIST1H2BHQ93079 126 aa4.13□□□□□ -1.75
TNFRSF11B-202ENST00000517352 RAB37Q96AX2 223 aa4.13□□□□□ -1.75
TNFRSF11B-202ENST00000517352 HIST1H2BNQ99877 126 aa4.13□□□□□ -1.75
TNFRSF11B-202ENST00000517352 HIST1H2BMQ99879 126 aa4.13□□□□□ -1.75
TNFRSF11B-202ENST00000517352 LEPROTO15243 131 aa4.12□□□□□ -1.75
TNFRSF11B-202ENST00000517352 ERC2-IT1O76042 136 aa4.12□□□□□ -1.75
TNFRSF11B-202ENST00000517352 NMUP48645 174 aa4.12□□□□□ -1.75
TNFRSF11B-202ENST00000517352 NPC2P61916 151 aa4.12□□□□□ -1.75
TNFRSF11B-202ENST00000517352 IGLV8-61A0A075B6I0 122 aa4.11□□□□□ -1.75
TNFRSF11B-202ENST00000517352 C9orf92A6NGG3 77 aa4.11□□□□□ -1.75
TNFRSF11B-202ENST00000517352 TMEM256-PLSCR3K7ERE1 68 aa4.11□□□□□ -1.75
TNFRSF11B-202ENST00000517352 M0R2T5 61 aa4.11□□□□□ -1.75
TNFRSF11B-202ENST00000517352 ATOH7Q8N100 152 aa4.11□□□□□ -1.75
TNFRSF11B-202ENST00000517352 KRTAP4-16G5E9R7 235 aaPredicted RBP4.1□□□□□ -1.75
TNFRSF11B-202ENST00000517352 UQCRQO14949 82 aa4.1□□□□□ -1.75
TNFRSF11B-202ENST00000517352 FABP4P15090 132 aa4.1□□□□□ -1.75
TNFRSF11B-202ENST00000517352 COX6B2Q6YFQ2 88 aa4.1□□□□□ -1.75
TNFRSF11B-202ENST00000517352 DEFB105AQ8NG35 78 aa4.1□□□□□ -1.75
TNFRSF11B-202ENST00000517352 Q9BRP9 147 aa4.1□□□□□ -1.75
TNFRSF11B-202ENST00000517352 IGKCP01834 107 aa4.09□□□□□ -1.75
TNFRSF11B-202ENST00000517352 CFC1BP0CG36 223 aa4.09□□□□□ -1.75
TNFRSF11B-202ENST00000517352 C10orf91Q5T1B1 145 aa4.09□□□□□ -1.75
TNFRSF11B-202ENST00000517352 ST20-AS1Q8NBB2 130 aa4.09□□□□□ -1.75
TNFRSF11B-202ENST00000517352 DHRS4-AS1Q9P1J3 65 aa4.09□□□□□ -1.75
TNFRSF11B-202ENST00000517352 COLCA2A8K830 154 aa4.08□□□□□ -1.76
TNFRSF11B-202ENST00000517352 IGLV6-57P01721 117 aa4.08□□□□□ -1.76
TNFRSF11B-202ENST00000517352 TRACP01848 142 aa4.08□□□□□ -1.76
TNFRSF11B-202ENST00000517352 PCOTHQ58A44 107 aa4.08□□□□□ -1.76
TNFRSF11B-202ENST00000517352 ADAMTSL4-AS1Q5T5F5 129 aa4.08□□□□□ -1.76
TNFRSF11B-202ENST00000517352 LINC01545Q5VT33 79 aa4.08□□□□□ -1.76
TNFRSF11B-202ENST00000517352 HIST3H2BBQ8N257 126 aa4.08□□□□□ -1.76
TNFRSF11B-202ENST00000517352 PMCHL2Q9BQD1 86 aa4.08□□□□□ -1.76
TNFRSF11B-202ENST00000517352 H7C2G1 150 aa4.07□□□□□ -1.76
TNFRSF11B-202ENST00000517352 TEN1Q86WV5 123 aa4.07□□□□□ -1.76
TNFRSF11B-202ENST00000517352 LOC107984156A0A0G2JMH3 177 aa4.06□□□□□ -1.76
TNFRSF11B-202ENST00000517352 A0A1B0GW54 56 aa4.06□□□□□ -1.76
TNFRSF11B-202ENST00000517352 HIST1H2BKO60814 126 aa4.06□□□□□ -1.76
TNFRSF11B-202ENST00000517352 HIST1H2BJP06899 126 aa4.06□□□□□ -1.76
TNFRSF11B-202ENST00000517352 COX7BP24311 80 aa4.06□□□□□ -1.76
TNFRSF11B-202ENST00000517352 TSPEAR-AS2P59090 65 aa4.06□□□□□ -1.76
TNFRSF11B-202ENST00000517352 CXCL6P80162 114 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms