RNA–Protein interactions for RNA: ENST00000517215.1

RNU6-1238P-201, Transcript of RNA, U6 small nuclear 1238, pseudogene, humanhuman

BASIC

Gene RNU6-1238P, Length 102 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1238P-201ENST00000517215 ROBO1Q9Y6N7 1651 aa-2.94□□□□□ -2.88
RNU6-1238P-201ENST00000517215 TMEM218A2RU14 115 aa-2.94□□□□□ -2.88
RNU6-1238P-201ENST00000517215 TSTD3H0UI37 97 aa-2.94□□□□□ -2.88
RNU6-1238P-201ENST00000517215 CEP19Q96LK0 163 aa-2.94□□□□□ -2.88
RNU6-1238P-201ENST00000517215 TOP2BQ02880 1626 aa-2.94□□□□□ -2.88
RNU6-1238P-201ENST00000517215 BAZ1AQ9NRL2 1556 aaPredicted RBP-2.95□□□□□ -2.88
RNU6-1238P-201ENST00000517215 SPEF2Q9C093 1822 aa-2.95□□□□□ -2.88
RNU6-1238P-201ENST00000517215 TRAV36DV7A0A075B6V5 113 aa-2.95□□□□□ -2.88
RNU6-1238P-201ENST00000517215 HSBP1L1C9JCN9 74 aa-2.95□□□□□ -2.88
RNU6-1238P-201ENST00000517215 SFTA3P0C7M3 94 aa-2.95□□□□□ -2.88
RNU6-1238P-201ENST00000517215 TFAMQ00059 246 aaKnown RBP-2.95□□□□□ -2.88
RNU6-1238P-201ENST00000517215 MINOS1Q5TGZ0 78 aa-2.95□□□□□ -2.88
RNU6-1238P-201ENST00000517215 C8orf59Q8N0T1 100 aaPredicted RBP-2.95□□□□□ -2.88
RNU6-1238P-201ENST00000517215 ZNF436-AS1Q8NC38 126 aaPredicted RBP-2.95□□□□□ -2.88
RNU6-1238P-201ENST00000517215 CGREF1Q99674 301 aa-2.95□□□□□ -2.88
RNU6-1238P-201ENST00000517215 GSKIPQ9P0R6 139 aa-2.95□□□□□ -2.88
RNU6-1238P-201ENST00000517215 CDH23Q9H251 3354 aa-2.95□□□□□ -2.88
RNU6-1238P-201ENST00000517215 TRAV21A0A0B4J279 112 aa-2.96□□□□□ -2.88
RNU6-1238P-201ENST00000517215 IQCF6A8MYZ5 107 aa-2.96□□□□□ -2.88
RNU6-1238P-201ENST00000517215 TSPAN19P0C672 248 aa-2.96□□□□□ -2.88
RNU6-1238P-201ENST00000517215 TPM4P67936 248 aa-2.96□□□□□ -2.88
RNU6-1238P-201ENST00000517215 NCBP2-AS2Q69YL0 99 aa-2.96□□□□□ -2.88
RNU6-1238P-201ENST00000517215 TRBV25-1A0A075B6N4 114 aa-2.97□□□□□ -2.88
RNU6-1238P-201ENST00000517215 DEFB131BA0A096LNP1 70 aa-2.97□□□□□ -2.88
RNU6-1238P-201ENST00000517215 D6R8Y8 96 aa-2.97□□□□□ -2.88
RNU6-1238P-201ENST00000517215 LINC00694P0DN24 101 aa-2.97□□□□□ -2.88
RNU6-1238P-201ENST00000517215 TOMM20LQ6UXN7 152 aa-2.97□□□□□ -2.88
RNU6-1238P-201ENST00000517215 MUSTN1Q8IVN3 82 aa-2.97□□□□□ -2.88
RNU6-1238P-201ENST00000517215 COPS9Q8WXC6 57 aa-2.97□□□□□ -2.88
RNU6-1238P-201ENST00000517215 CFTRP13569 1480 aa-2.97□□□□□ -2.89
RNU6-1238P-201ENST00000517215 CCNB3Q8WWL7 1395 aa-2.98□□□□□ -2.89
RNU6-1238P-201ENST00000517215 OVOS2A0A0J9YW53 1432 aa-2.98□□□□□ -2.89
RNU6-1238P-201ENST00000517215 OVOS2Q6IE36 1432 aa-2.98□□□□□ -2.89
RNU6-1238P-201ENST00000517215 HMGN3Q15651 99 aa-2.98□□□□□ -2.89
RNU6-1238P-201ENST00000517215 PMCHL1Q16048 86 aa-2.98□□□□□ -2.89
RNU6-1238P-201ENST00000517215 RGPD1P0DJD0 1748 aa-2.99□□□□□ -2.89
RNU6-1238P-201ENST00000517215 DOT1LQ8TEK3 1739 aa-2.99□□□□□ -2.89
RNU6-1238P-201ENST00000517215 MYH4Q9Y623 1939 aa-2.99□□□□□ -2.89
RNU6-1238P-201ENST00000517215 NAP1L6A6NFF2 107 aa-2.99□□□□□ -2.89
RNU6-1238P-201ENST00000517215 CRYM-AS1A6NIL9 109 aa-2.99□□□□□ -2.89
RNU6-1238P-201ENST00000517215 FCER1GP30273 86 aa-2.99□□□□□ -2.89
RNU6-1238P-201ENST00000517215 ACBD7Q8N6N7 88 aa-2.99□□□□□ -2.89
RNU6-1238P-201ENST00000517215 C6orf48Q9UBA6 75 aa-2.99□□□□□ -2.89
RNU6-1238P-201ENST00000517215 CACFD1Q9UGQ2 172 aa-2.99□□□□□ -2.89
RNU6-1238P-201ENST00000517215 ATPIF1Q9UII2 106 aa-2.99□□□□□ -2.89
RNU6-1238P-201ENST00000517215 GINS2Q9Y248 185 aa-2.99□□□□□ -2.89
RNU6-1238P-201ENST00000517215 CLASP1Q7Z460 1538 aa-2.99□□□□□ -2.89
RNU6-1238P-201ENST00000517215 ABCC2Q92887 1545 aa-2.99□□□□□ -2.89
RNU6-1238P-201ENST00000517215 A0A1B0GUT8 65 aa-3□□□□□ -2.89
RNU6-1238P-201ENST00000517215 M0QX08 132 aa-3□□□□□ -2.89
RNU6-1238P-201ENST00000517215 TPM2P07951 284 aa-3□□□□□ -2.89
RNU6-1238P-201ENST00000517215 TPM1P09493 284 aa-3□□□□□ -2.89
RNU6-1238P-201ENST00000517215 MORN2Q502X0 79 aa-3□□□□□ -2.89
RNU6-1238P-201ENST00000517215 SAMD13Q5VXD3 122 aa-3□□□□□ -2.89
RNU6-1238P-201ENST00000517215 ATP6V1DQ9Y5K8 247 aa-3□□□□□ -2.89
RNU6-1238P-201ENST00000517215 NEXMIFQ5QGS0 1516 aa-3□□□□□ -2.89
RNU6-1238P-201ENST00000517215 SYNMO15061 1565 aa-3□□□□□ -2.89
RNU6-1238P-201ENST00000517215 CHD1O14646 1710 aa-3.01□□□□□ -2.89
RNU6-1238P-201ENST00000517215 ITSN1Q15811 1721 aa-3.01□□□□□ -2.89
RNU6-1238P-201ENST00000517215 J3QR89 54 aa-3.01□□□□□ -2.89
RNU6-1238P-201ENST00000517215 C20orf78Q9BR46 151 aa-3.01□□□□□ -2.89
RNU6-1238P-201ENST00000517215 PDCD10Q9BUL8 212 aa-3.01□□□□□ -2.89
RNU6-1238P-201ENST00000517215 DDX60LQ5H9U9 1706 aaKnown RBP-3.02□□□□□ -2.89
RNU6-1238P-201ENST00000517215 BRCA2P51587 3418 aa-3.02□□□□□ -2.89
RNU6-1238P-201ENST00000517215 MRPL33O75394 65 aaKnown RBP-3.02□□□□□ -2.89
RNU6-1238P-201ENST00000517215 CRIP1P50238 77 aa-3.02□□□□□ -2.89
RNU6-1238P-201ENST00000517215 SMCO1Q147U7 214 aa-3.02□□□□□ -2.89
RNU6-1238P-201ENST00000517215 CCDC167Q9P0B6 97 aa-3.02□□□□□ -2.89
RNU6-1238P-201ENST00000517215 PREX2Q70Z35 1606 aa-3.02□□□□□ -2.89
RNU6-1238P-201ENST00000517215 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP-3.03□□□□□ -2.89
RNU6-1238P-201ENST00000517215 NRXN3Q9Y4C0 1643 aa-3.03□□□□□ -2.89
RNU6-1238P-201ENST00000517215 AIF1LQ9BQI0 150 aa-3.03□□□□□ -2.89
RNU6-1238P-201ENST00000517215 DPH3P1Q9H4G8 78 aa-3.03□□□□□ -2.89
RNU6-1238P-201ENST00000517215 K7ERU9 68 aa-3.04□□□□□ -2.9
RNU6-1238P-201ENST00000517215 CTXN2P0C2S0 81 aa-3.04□□□□□ -2.9
RNU6-1238P-201ENST00000517215 ATP5EP56381 51 aaPredicted RBP-3.04□□□□□ -2.9
RNU6-1238P-201ENST00000517215 CATR1Q13166 79 aa-3.04□□□□□ -2.9
RNU6-1238P-201ENST00000517215 SPANXCQ9NY87 97 aa-3.04□□□□□ -2.9
RNU6-1238P-201ENST00000517215 FHAD1B1AJZ9 1412 aa-3.04□□□□□ -2.9
RNU6-1238P-201ENST00000517215 DIP2BQ9P265 1576 aa-3.04□□□□□ -2.9
RNU6-1238P-201ENST00000517215 MAP3K4Q9Y6R4 1608 aa-3.04□□□□□ -2.9
RNU6-1238P-201ENST00000517215 MPC2O95563 127 aa-3.05□□□□□ -2.9
RNU6-1238P-201ENST00000517215 RPL13AP3Q6NVV1 102 aa-3.05□□□□□ -2.9
RNU6-1238P-201ENST00000517215 VPS13AQ96RL7 3174 aa-3.05□□□□□ -2.9
RNU6-1238P-201ENST00000517215 APOC2P02655 101 aa-3.06□□□□□ -2.9
RNU6-1238P-201ENST00000517215 UQCRHP07919 91 aa-3.06□□□□□ -2.9
RNU6-1238P-201ENST00000517215 CCDC153Q494R4 210 aa-3.06□□□□□ -2.9
RNU6-1238P-201ENST00000517215 PPP1R14BQ96C90 147 aa-3.06□□□□□ -2.9
RNU6-1238P-201ENST00000517215 CC2D2AQ9P2K1 1620 aa-3.06□□□□□ -2.9
RNU6-1238P-201ENST00000517215 LTN1O94822 1766 aa-3.07□□□□□ -2.9
RNU6-1238P-201ENST00000517215 TJP1Q07157 1748 aa-3.07□□□□□ -2.9
RNU6-1238P-201ENST00000517215 KIF14Q15058 1648 aa-3.07□□□□□ -2.9
RNU6-1238P-201ENST00000517215 RAPGEF2Q9Y4G8 1499 aa-3.07□□□□□ -2.9
RNU6-1238P-201ENST00000517215 H3BQ15 152 aa-3.07□□□□□ -2.9
RNU6-1238P-201ENST00000517215 NDUFA4O00483 81 aa-3.07□□□□□ -2.9
RNU6-1238P-201ENST00000517215 CYB5AP00167 134 aa-3.07□□□□□ -2.9
RNU6-1238P-201ENST00000517215 TPM3P06753 285 aa-3.07□□□□□ -2.9
RNU6-1238P-201ENST00000517215 IFI27P40305 119 aaPredicted RBP-3.07□□□□□ -2.9
RNU6-1238P-201ENST00000517215 ETDBQ3ZM63 59 aa-3.07□□□□□ -2.9
RNU6-1238P-201ENST00000517215 ATP6V1G3Q96LB4 118 aa-3.07□□□□□ -2.9
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms