RNA–Protein interactions for RNA: ENST00000516543.1

SNORA40.14-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 86 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.14-201ENST00000516543 ANKRD36CQ5JPF3 1778 aa-3.76□□□□□ -3.01
SNORA40.14-201ENST00000516543 MPC2O95563 127 aa-3.77□□□□□ -3.01
SNORA40.14-201ENST00000516543 ALKAL2Q6UX46 152 aa-3.77□□□□□ -3.01
SNORA40.14-201ENST00000516543 GAFA1Q96PS6 74 aa-3.77□□□□□ -3.01
SNORA40.14-201ENST00000516543 HMGN3Q15651 99 aa-3.78□□□□□ -3.01
SNORA40.14-201ENST00000516543 ETDBQ3ZM63 59 aa-3.78□□□□□ -3.01
SNORA40.14-201ENST00000516543 KRTAP8-1Q8IUC2 63 aa-3.78□□□□□ -3.01
SNORA40.14-201ENST00000516543 MAGI3Q5TCQ9 1506 aa-3.79□□□□□ -3.02
SNORA40.14-201ENST00000516543 F8WEM9 126 aa-3.79□□□□□ -3.02
SNORA40.14-201ENST00000516543 PPP3R1P63098 170 aa-3.79□□□□□ -3.02
SNORA40.14-201ENST00000516543 ADGRG4Q8IZF6 3080 aa-3.79□□□□□ -3.02
SNORA40.14-201ENST00000516543 GNGT2O14610 69 aa-3.81□□□□□ -3.02
SNORA40.14-201ENST00000516543 GNG4P50150 75 aa-3.81□□□□□ -3.02
SNORA40.14-201ENST00000516543 POLR1AO95602 1720 aaPredicted RBP-3.81□□□□□ -3.02
SNORA40.14-201ENST00000516543 IAPPP10997 89 aa-3.82□□□□□ -3.02
SNORA40.14-201ENST00000516543 PZPP20742 1482 aa-3.82□□□□□ -3.02
SNORA40.14-201ENST00000516543 PRDM15P57071 1507 aaPredicted RBP-3.82□□□□□ -3.02
SNORA40.14-201ENST00000516543 NWD1Q149M9 1564 aa-3.82□□□□□ -3.02
SNORA40.14-201ENST00000516543 ZNF831Q5JPB2 1677 aa-3.82□□□□□ -3.02
SNORA40.14-201ENST00000516543 IQCF6A8MYZ5 107 aa-3.83□□□□□ -3.02
SNORA40.14-201ENST00000516543 LYNX1G3V0Z9 82 aa-3.83□□□□□ -3.02
SNORA40.14-201ENST00000516543 ANKRD36BQ8N2N9 1353 aa-3.85□□□□□ -3.03
SNORA40.14-201ENST00000516543 TSC22D3Q99576 134 aa-3.85□□□□□ -3.03
SNORA40.14-201ENST00000516543 TNP1P09430 55 aa-3.86□□□□□ -3.03
SNORA40.14-201ENST00000516543 IFI6P09912 130 aa-3.86□□□□□ -3.03
SNORA40.14-201ENST00000516543 ZNF720Q7Z2F6 126 aa-3.86□□□□□ -3.03
SNORA40.14-201ENST00000516543 MT1MQ8N339 61 aa-3.86□□□□□ -3.03
SNORA40.14-201ENST00000516543 CEP170BQ9Y4F5 1589 aaPredicted RBP-3.86□□□□□ -3.03
SNORA40.14-201ENST00000516543 MGAQ8IWI9 3026 aa-3.87□□□□□ -3.03
SNORA40.14-201ENST00000516543 DOT1LQ8TEK3 1739 aa-3.87□□□□□ -3.03
SNORA40.14-201ENST00000516543 BAZ1AQ9NRL2 1556 aaPredicted RBP-3.87□□□□□ -3.03
SNORA40.14-201ENST00000516543 ABCC10Q5T3U5 1492 aa-3.87□□□□□ -3.03
SNORA40.14-201ENST00000516543 LTN1O94822 1766 aa-3.89□□□□□ -3.03
SNORA40.14-201ENST00000516543 MMP24-AS1A0A0U1RRL7 71 aa-3.89□□□□□ -3.03
SNORA40.14-201ENST00000516543 A0A1B0GUT8 65 aa-3.89□□□□□ -3.03
SNORA40.14-201ENST00000516543 PMCHL2Q9BQD1 86 aa-3.89□□□□□ -3.03
SNORA40.14-201ENST00000516543 DMXL2Q8TDJ6 3036 aa-3.89□□□□□ -3.03
SNORA40.14-201ENST00000516543 CORTO00230 105 aa-3.9□□□□□ -3.03
SNORA40.14-201ENST00000516543 MT2AP02795 61 aa-3.9□□□□□ -3.03
SNORA40.14-201ENST00000516543 S100A1P23297 94 aa-3.9□□□□□ -3.03
SNORA40.14-201ENST00000516543 TOGARAM1Q9Y4F4 1720 aa-3.92□□□□□ -3.04
SNORA40.14-201ENST00000516543 CDC42BPGQ6DT37 1551 aa-3.92□□□□□ -3.04
SNORA40.14-201ENST00000516543 FAM107BQ9H098 131 aa-3.92□□□□□ -3.04
SNORA40.14-201ENST00000516543 ATP7BP35670 1465 aa-3.92□□□□□ -3.04
SNORA40.14-201ENST00000516543 CLTCQ00610 1675 aaKnown RBP-3.93□□□□□ -3.04
SNORA40.14-201ENST00000516543 TRAV21A0A0B4J279 112 aa-3.93□□□□□ -3.04
SNORA40.14-201ENST00000516543 WFDC9Q8NEX5 89 aa-3.93□□□□□ -3.04
SNORA40.14-201ENST00000516543 TEX14Q8IWB6 1497 aa-3.93□□□□□ -3.04
SNORA40.14-201ENST00000516543 PARP4Q9UKK3 1724 aaKnown RBP-3.95□□□□□ -3.04
SNORA40.14-201ENST00000516543 ATOX1O00244 68 aa-3.95□□□□□ -3.04
SNORA40.14-201ENST00000516543 LCE6AA0A183 80 aa-3.96□□□□□ -3.04
SNORA40.14-201ENST00000516543 TMEM203Q969S6 136 aa-3.97□□□□□ -3.04
SNORA40.14-201ENST00000516543 MT-ATP8P03928 68 aa-3.98□□□□□ -3.05
SNORA40.14-201ENST00000516543 MT1BP07438 61 aa-3.98□□□□□ -3.05
SNORA40.14-201ENST00000516543 PLGLAQ15195 96 aa-3.98□□□□□ -3.05
SNORA40.14-201ENST00000516543 GTF2H5Q6ZYL4 71 aa-3.98□□□□□ -3.05
SNORA40.14-201ENST00000516543 TLN1Q9Y490 2541 aaKnown RBP-3.99□□□□□ -3.05
SNORA40.14-201ENST00000516543 UQCRHLA0A096LP55 91 aa-3.99□□□□□ -3.05
SNORA40.14-201ENST00000516543 TIMM8BQ9Y5J9 83 aaPredicted RBP-3.99□□□□□ -3.05
SNORA40.14-201ENST00000516543 IGLV5-48A0A075B6I7 105 aa-4□□□□□ -3.05
SNORA40.14-201ENST00000516543 DLEU1O43261 78 aa-4□□□□□ -3.05
SNORA40.14-201ENST00000516543 DDX60LQ5H9U9 1706 aaKnown RBP-4.01□□□□□ -3.05
SNORA40.14-201ENST00000516543 A0A1B0GV90 55 aa-4.01□□□□□ -3.05
SNORA40.14-201ENST00000516543 COL5A1-AS1Q5SY13 56 aa-4.02□□□□□ -3.05
SNORA40.14-201ENST00000516543 RPL13AP3Q6NVV1 102 aa-4.02□□□□□ -3.05
SNORA40.14-201ENST00000516543 EIF4G3O43432 1585 aaKnown RBP-4.02□□□□□ -3.05
SNORA40.14-201ENST00000516543 PLIN4Q96Q06 1357 aa-4.02□□□□□ -3.05
SNORA40.14-201ENST00000516543 ACYP1P07311 99 aa-4.03□□□□□ -3.05
SNORA40.14-201ENST00000516543 ATMQ13315 3056 aa-4.03□□□□□ -3.06
SNORA40.14-201ENST00000516543 CYB5AP00167 134 aa-4.04□□□□□ -3.06
SNORA40.14-201ENST00000516543 FAUP35544 74 aaKnown RBP-4.04□□□□□ -3.06
SNORA40.14-201ENST00000516543 ITPR2Q14571 2701 aa-4.04□□□□□ -3.06
SNORA40.14-201ENST00000516543 LY75O60449 1722 aa-4.06□□□□□ -3.06
SNORA40.14-201ENST00000516543 HMGN2P05204 90 aaKnown RBP-4.06□□□□□ -3.06
SNORA40.14-201ENST00000516543 KRTAP20-1Q3LI63 56 aa-4.06□□□□□ -3.06
SNORA40.14-201ENST00000516543 GNG8Q9UK08 70 aa-4.07□□□□□ -3.06
SNORA40.14-201ENST00000516543 UBR1Q8IWV7 1749 aa-4.07□□□□□ -3.06
SNORA40.14-201ENST00000516543 CSMD2Q7Z408 3487 aa-4.08□□□□□ -3.06
SNORA40.14-201ENST00000516543 EPRSP07814 1512 aaKnown RBP-4.08□□□□□ -3.06
SNORA40.14-201ENST00000516543 ITSN2Q9NZM3 1697 aa-4.08□□□□□ -3.06
SNORA40.14-201ENST00000516543 ZFYVE16Q7Z3T8 1539 aa-4.09□□□□□ -3.06
SNORA40.14-201ENST00000516543 WT1-ASQ06250 92 aa-4.09□□□□□ -3.06
SNORA40.14-201ENST00000516543 MRPS10P82664 201 aaKnown RBP-4.1□□□□□ -3.07
SNORA40.14-201ENST00000516543 DIP2BQ9P265 1576 aa-4.1□□□□□ -3.07
SNORA40.14-201ENST00000516543 FANCAO15360 1455 aa-4.11□□□□□ -3.07
SNORA40.14-201ENST00000516543 ITSN1Q15811 1721 aa-4.11□□□□□ -3.07
SNORA40.14-201ENST00000516543 UNC13AQ9UPW8 1703 aa-4.11□□□□□ -3.07
SNORA40.14-201ENST00000516543 S100A12P80511 92 aa-4.12□□□□□ -3.07
SNORA40.14-201ENST00000516543 NEXMIFQ5QGS0 1516 aa-4.12□□□□□ -3.07
SNORA40.14-201ENST00000516543 ARFGEF2Q9Y6D5 1785 aa-4.14□□□□□ -3.07
SNORA40.14-201ENST00000516543 HMGN1P05114 100 aa-4.14□□□□□ -3.07
SNORA40.14-201ENST00000516543 NCOA2Q15596 1464 aa-4.14□□□□□ -3.07
SNORA40.14-201ENST00000516543 FYCO1Q9BQS8 1478 aa-4.16□□□□□ -3.08
SNORA40.14-201ENST00000516543 PLCH1Q4KWH8 1693 aa-4.16□□□□□ -3.08
SNORA40.14-201ENST00000516543 ATP10BO94823 1461 aa-4.17□□□□□ -3.08
SNORA40.14-201ENST00000516543 KIF1AQ12756 1690 aa-4.17□□□□□ -3.08
SNORA40.14-201ENST00000516543 ZC3H13Q5T200 1668 aaKnown RBP-4.17□□□□□ -3.08
SNORA40.14-201ENST00000516543 NDUFB1O75438 58 aa-4.18□□□□□ -3.08
SNORA40.14-201ENST00000516543 MYO3AQ8NEV4 1616 aa-4.18□□□□□ -3.08
SNORA40.14-201ENST00000516543 MAST1Q9Y2H9 1570 aa-4.19□□□□□ -3.08
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms