RNA–Protein interactions for RNA: ENST00000515531.1

SMARCA5-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

TSL 2

Gene SMARCA5, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-203ENST00000515531 SAMD9Q5K651 1589 aa-1.96□□□□□ -2.72
SMARCA5-203ENST00000515531 MMP24-AS1A0A0U1RRL7 71 aa-1.96□□□□□ -2.72
SMARCA5-203ENST00000515531 NDUFA3O95167 84 aa-1.96□□□□□ -2.72
SMARCA5-203ENST00000515531 NMSQ5H8A3 153 aa-1.96□□□□□ -2.72
SMARCA5-203ENST00000515531 DEFB106AQ8N104 65 aa-1.96□□□□□ -2.72
SMARCA5-203ENST00000515531 UBE2D4Q9Y2X8 147 aa-1.96□□□□□ -2.72
SMARCA5-203ENST00000515531 PREX1Q8TCU6 1659 aa-1.96□□□□□ -2.72
SMARCA5-203ENST00000515531 FAM107BQ9H098 131 aa-1.97□□□□□ -2.72
SMARCA5-203ENST00000515531 MAST1Q9Y2H9 1570 aa-1.98□□□□□ -2.73
SMARCA5-203ENST00000515531 ABCC5O15440 1437 aa-1.98□□□□□ -2.73
SMARCA5-203ENST00000515531 UBR3Q6ZT12 1888 aa-1.98□□□□□ -2.73
SMARCA5-203ENST00000515531 TRBV25-1A0A075B6N4 114 aa-1.98□□□□□ -2.73
SMARCA5-203ENST00000515531 LINC01546A6NGU7 62 aa-1.98□□□□□ -2.73
SMARCA5-203ENST00000515531 GNG4P50150 75 aa-1.98□□□□□ -2.73
SMARCA5-203ENST00000515531 PMCHL1Q16048 86 aa-1.98□□□□□ -2.73
SMARCA5-203ENST00000515531 CACFD1Q9UGQ2 172 aa-1.98□□□□□ -2.73
SMARCA5-203ENST00000515531 TOGARAM1Q9Y4F4 1720 aa-1.98□□□□□ -2.73
SMARCA5-203ENST00000515531 RGPD3A6NKT7 1758 aaPredicted RBP-1.98□□□□□ -2.73
SMARCA5-203ENST00000515531 RGPD4Q7Z3J3 1758 aa-1.98□□□□□ -2.73
SMARCA5-203ENST00000515531 CFAP47Q6ZTR5 3102 aa-1.99□□□□□ -2.73
SMARCA5-203ENST00000515531 LY75O60449 1722 aa-1.99□□□□□ -2.73
SMARCA5-203ENST00000515531 PPP3R1P63098 170 aa-1.99□□□□□ -2.73
SMARCA5-203ENST00000515531 S100A12P80511 92 aa-1.99□□□□□ -2.73
SMARCA5-203ENST00000515531 AP4S1Q9Y587 144 aa-1.99□□□□□ -2.73
SMARCA5-203ENST00000515531 PKD1L3Q7Z443 1732 aa-2□□□□□ -2.73
SMARCA5-203ENST00000515531 RGPD8O14715 1765 aaPredicted RBP-2□□□□□ -2.73
SMARCA5-203ENST00000515531 RGPD5Q99666 1765 aa-2□□□□□ -2.73
SMARCA5-203ENST00000515531 ABCC2Q92887 1545 aa-2□□□□□ -2.73
SMARCA5-203ENST00000515531 USP32Q8NFA0 1604 aa-2□□□□□ -2.73
SMARCA5-203ENST00000515531 hADV29S1A0JD25 119 aa-2.01□□□□□ -2.73
SMARCA5-203ENST00000515531 A8MTW9 85 aa-2.01□□□□□ -2.73
SMARCA5-203ENST00000515531 NDUFC1O43677 76 aa-2.01□□□□□ -2.73
SMARCA5-203ENST00000515531 ATP7BP35670 1465 aa-2.01□□□□□ -2.73
SMARCA5-203ENST00000515531 EIF4G3O43432 1585 aaKnown RBP-2.02□□□□□ -2.73
SMARCA5-203ENST00000515531 WIZO95785 1651 aa-2.02□□□□□ -2.73
SMARCA5-203ENST00000515531 CRYBG1Q9Y4K1 1723 aa-2.02□□□□□ -2.73
SMARCA5-203ENST00000515531 CEP250Q9BV73 2442 aa-2.02□□□□□ -2.73
SMARCA5-203ENST00000515531 IGLV5-48A0A075B6I7 105 aa-2.02□□□□□ -2.73
SMARCA5-203ENST00000515531 DEFB136Q30KP8 78 aa-2.02□□□□□ -2.73
SMARCA5-203ENST00000515531 COX6B2Q6YFQ2 88 aa-2.02□□□□□ -2.73
SMARCA5-203ENST00000515531 MLH3Q9UHC1 1453 aa-2.02□□□□□ -2.73
SMARCA5-203ENST00000515531 TNRC6CQ9HCJ0 1690 aaKnown RBP-2.02□□□□□ -2.73
SMARCA5-203ENST00000515531 PARP4Q9UKK3 1724 aaKnown RBP-2.03□□□□□ -2.73
SMARCA5-203ENST00000515531 DEFB130BP0DP73 79 aa-2.03□□□□□ -2.73
SMARCA5-203ENST00000515531 DEFB130AP0DP74 79 aa-2.03□□□□□ -2.73
SMARCA5-203ENST00000515531 ASXL1Q8IXJ9 1541 aa-2.03□□□□□ -2.73
SMARCA5-203ENST00000515531 VCANP13611 3396 aa-2.04□□□□□ -2.74
SMARCA5-203ENST00000515531 HMGN1P05114 100 aa-2.04□□□□□ -2.74
SMARCA5-203ENST00000515531 UQCRHP07919 91 aa-2.04□□□□□ -2.74
SMARCA5-203ENST00000515531 PZPP20742 1482 aa-2.04□□□□□ -2.74
SMARCA5-203ENST00000515531 USP34Q70CQ2 3546 aa-2.05□□□□□ -2.74
SMARCA5-203ENST00000515531 FAM135AQ9P2D6 1515 aa-2.05□□□□□ -2.74
SMARCA5-203ENST00000515531 MPC2O95563 127 aa-2.05□□□□□ -2.74
SMARCA5-203ENST00000515531 LOC400499M0QZD8 3231 aa-2.05□□□□□ -2.74
SMARCA5-203ENST00000515531 A0A1B0GUL6 1792 aa-2.05□□□□□ -2.74
SMARCA5-203ENST00000515531 RAPGEF2Q9Y4G8 1499 aa-2.06□□□□□ -2.74
SMARCA5-203ENST00000515531 CORTO00230 105 aa-2.06□□□□□ -2.74
SMARCA5-203ENST00000515531 RPL13AP3Q6NVV1 102 aa-2.06□□□□□ -2.74
SMARCA5-203ENST00000515531 POLR1AO95602 1720 aaPredicted RBP-2.06□□□□□ -2.74
SMARCA5-203ENST00000515531 IGLC2P0DOY2 106 aa-2.07□□□□□ -2.74
SMARCA5-203ENST00000515531 IGLC3P0DOY3 106 aa-2.07□□□□□ -2.74
SMARCA5-203ENST00000515531 LINC00158P58513 81 aa-2.07□□□□□ -2.74
SMARCA5-203ENST00000515531 TRGV9Q99603 122 aa-2.07□□□□□ -2.74
SMARCA5-203ENST00000515531 PIK3C2BO00750 1634 aa-2.07□□□□□ -2.74
SMARCA5-203ENST00000515531 PLCH1Q4KWH8 1693 aa-2.08□□□□□ -2.74
SMARCA5-203ENST00000515531 DNMBPQ6XZF7 1577 aa-2.08□□□□□ -2.74
SMARCA5-203ENST00000515531 UNC80Q8N2C7 3258 aa-2.08□□□□□ -2.74
SMARCA5-203ENST00000515531 DEPDC5O75140 1603 aa-2.09□□□□□ -2.74
SMARCA5-203ENST00000515531 LCE6AA0A183 80 aa-2.09□□□□□ -2.74
SMARCA5-203ENST00000515531 TMEM218A2RU14 115 aa-2.09□□□□□ -2.74
SMARCA5-203ENST00000515531 M0QZ58 72 aa-2.09□□□□□ -2.74
SMARCA5-203ENST00000515531 KRTAP19-2Q3LHN2 52 aa-2.09□□□□□ -2.74
SMARCA5-203ENST00000515531 ALKAL2Q6UX46 152 aa-2.09□□□□□ -2.74
SMARCA5-203ENST00000515531 LEAP2Q969E1 77 aa-2.09□□□□□ -2.74
SMARCA5-203ENST00000515531 ITSN2Q9NZM3 1697 aa-2.09□□□□□ -2.74
SMARCA5-203ENST00000515531 MAGI3Q5TCQ9 1506 aa-2.1□□□□□ -2.75
SMARCA5-203ENST00000515531 ASPMQ8IZT6 3477 aa-2.1□□□□□ -2.75
SMARCA5-203ENST00000515531 DLEU1O43261 78 aa-2.1□□□□□ -2.75
SMARCA5-203ENST00000515531 IAPPP10997 89 aa-2.1□□□□□ -2.75
SMARCA5-203ENST00000515531 S100A1P23297 94 aa-2.1□□□□□ -2.75
SMARCA5-203ENST00000515531 HMGN3Q15651 99 aa-2.1□□□□□ -2.75
SMARCA5-203ENST00000515531 TEX14Q8IWB6 1497 aa-2.1□□□□□ -2.75
SMARCA5-203ENST00000515531 KIF21BO75037 1637 aa-2.1□□□□□ -2.75
SMARCA5-203ENST00000515531 LRRC9Q6ZRR7 1453 aa-2.11□□□□□ -2.75
SMARCA5-203ENST00000515531 LYNX1G3V0Z9 82 aa-2.11□□□□□ -2.75
SMARCA5-203ENST00000515531 MT-ATP8P03928 68 aa-2.11□□□□□ -2.75
SMARCA5-203ENST00000515531 RPL38P63173 70 aaKnown RBP-2.11□□□□□ -2.75
SMARCA5-203ENST00000515531 GTF2H5Q6ZYL4 71 aa-2.11□□□□□ -2.75
SMARCA5-203ENST00000515531 UBR1Q8IWV7 1749 aa-2.11□□□□□ -2.75
SMARCA5-203ENST00000515531 CROCC2H7BZ55 1655 aa-2.12□□□□□ -2.75
SMARCA5-203ENST00000515531 TMEM131LA2VDJ0 1609 aa-2.12□□□□□ -2.75
SMARCA5-203ENST00000515531 NESP48681 1621 aa-2.12□□□□□ -2.75
SMARCA5-203ENST00000515531 MYH4Q9Y623 1939 aa-2.12□□□□□ -2.75
SMARCA5-203ENST00000515531 SPART-AS1P0CW21 52 aa-2.12□□□□□ -2.75
SMARCA5-203ENST00000515531 COX7BP24311 80 aa-2.12□□□□□ -2.75
SMARCA5-203ENST00000515531 SUPT6HQ7KZ85 1726 aaKnown RBP-2.12□□□□□ -2.75
SMARCA5-203ENST00000515531 NRXN1Q9ULB1 1477 aa-2.13□□□□□ -2.75
SMARCA5-203ENST00000515531 D6R8Y8 96 aa-2.13□□□□□ -2.75
SMARCA5-203ENST00000515531 GNGT2O14610 69 aa-2.13□□□□□ -2.75
SMARCA5-203ENST00000515531 C3orf79P0CE67 100 aa-2.13□□□□□ -2.75
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms