RNA–Protein interactions for RNA: ENST00000514006.1

CALCOCO2-222, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 2

Gene CALCOCO2, Length 500 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-222ENST00000514006 BOD1L1Q8NFC6 3051 aa0.13□□□□□ -2.39
CALCOCO2-222ENST00000514006 DCAF1Q9Y4B6 1507 aa0.13□□□□□ -2.39
CALCOCO2-222ENST00000514006 M0R2T5 61 aa0.12□□□□□ -2.39
CALCOCO2-222ENST00000514006 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP0.12□□□□□ -2.39
CALCOCO2-222ENST00000514006 MTORP42345 2549 aa0.12□□□□□ -2.39
CALCOCO2-222ENST00000514006 TLN2Q9Y4G6 2542 aa0.12□□□□□ -2.39
CALCOCO2-222ENST00000514006 ARFGEF2Q9Y6D5 1785 aa0.11□□□□□ -2.39
CALCOCO2-222ENST00000514006 TEX15Q9BXT5 2789 aa0.11□□□□□ -2.39
CALCOCO2-222ENST00000514006 CEP170BQ9Y4F5 1589 aaPredicted RBP0.11□□□□□ -2.39
CALCOCO2-222ENST00000514006 ERVK-7P63135 1459 aa0.11□□□□□ -2.39
CALCOCO2-222ENST00000514006 NCOA2Q15596 1464 aa0.11□□□□□ -2.39
CALCOCO2-222ENST00000514006 CEP250Q9BV73 2442 aa0.11□□□□□ -2.39
CALCOCO2-222ENST00000514006 MAP1AP78559 2803 aaPredicted RBP0.11□□□□□ -2.39
CALCOCO2-222ENST00000514006 ALMS1Q8TCU4 4167 aa0.11□□□□□ -2.39
CALCOCO2-222ENST00000514006 TNRC6CQ9HCJ0 1690 aaKnown RBP0.11□□□□□ -2.39
CALCOCO2-222ENST00000514006 SRRM2Q9UQ35 2752 aaKnown RBP0.11□□□□□ -2.39
CALCOCO2-222ENST00000514006 ARHGAP35Q9NRY4 1499 aa0.1□□□□□ -2.39
CALCOCO2-222ENST00000514006 LRBAP50851 2863 aa0.1□□□□□ -2.39
CALCOCO2-222ENST00000514006 HSPG2P98160 4391 aa0.1□□□□□ -2.39
CALCOCO2-222ENST00000514006 WFDC13Q8IUB5 93 aa0.1□□□□□ -2.39
CALCOCO2-222ENST00000514006 LAMA3Q16787 3333 aa0.1□□□□□ -2.39
CALCOCO2-222ENST00000514006 CENPEQ02224 2701 aa0.1□□□□□ -2.39
CALCOCO2-222ENST00000514006 LAMA2P24043 3122 aaKnown RBP0.09□□□□□ -2.39
CALCOCO2-222ENST00000514006 UNC80Q8N2C7 3258 aa0.09□□□□□ -2.39
CALCOCO2-222ENST00000514006 DNHD1Q96M86 4753 aa0.09□□□□□ -2.39
CALCOCO2-222ENST00000514006 CRYBG3Q68DQ2 2970 aa0.09□□□□□ -2.4
CALCOCO2-222ENST00000514006 COX6B2Q6YFQ2 88 aa0.09□□□□□ -2.4
CALCOCO2-222ENST00000514006 DCHS1Q96JQ0 3298 aa0.09□□□□□ -2.4
CALCOCO2-222ENST00000514006 EP400Q96L91 3159 aa0.09□□□□□ -2.4
CALCOCO2-222ENST00000514006 FAM186AA6NE01 2351 aa0.09□□□□□ -2.4
CALCOCO2-222ENST00000514006 TACC2O95359 2948 aa0.08□□□□□ -2.4
CALCOCO2-222ENST00000514006 SPEGQ15772 3267 aa0.08□□□□□ -2.4
CALCOCO2-222ENST00000514006 PCNTO95613 3336 aa0.08□□□□□ -2.4
CALCOCO2-222ENST00000514006 SRCAPQ6ZRS2 3230 aa0.08□□□□□ -2.4
CALCOCO2-222ENST00000514006 SCN11AQ9UI33 1791 aa0.08□□□□□ -2.4
CALCOCO2-222ENST00000514006 MAGI3Q5TCQ9 1506 aa0.08□□□□□ -2.4
CALCOCO2-222ENST00000514006 C4AP0C0L4 1744 aa0.07□□□□□ -2.4
CALCOCO2-222ENST00000514006 C4BP0C0L5 1744 aa0.07□□□□□ -2.4
CALCOCO2-222ENST00000514006 NWD1Q149M9 1564 aa0.07□□□□□ -2.4
CALCOCO2-222ENST00000514006 FREM2Q5SZK8 3169 aa0.07□□□□□ -2.4
CALCOCO2-222ENST00000514006 H3BUT2 72 aa0.07□□□□□ -2.4
CALCOCO2-222ENST00000514006 LRP2P98164 4655 aa0.07□□□□□ -2.4
CALCOCO2-222ENST00000514006 CFAP54Q96N23 3096 aa0.07□□□□□ -2.4
CALCOCO2-222ENST00000514006 CEP350Q5VT06 3117 aa0.07□□□□□ -2.4
CALCOCO2-222ENST00000514006 EYSQ5T1H1 3165 aa0.06□□□□□ -2.4
CALCOCO2-222ENST00000514006 ZFHX4Q86UP3 3567 aa0.06□□□□□ -2.4
CALCOCO2-222ENST00000514006 DMXL2Q8TDJ6 3036 aa0.06□□□□□ -2.4
CALCOCO2-222ENST00000514006 NESP48681 1621 aa0.06□□□□□ -2.4
CALCOCO2-222ENST00000514006 SCRIBQ14160 1630 aa0.06□□□□□ -2.4
CALCOCO2-222ENST00000514006 CEP290O15078 2479 aa0.06□□□□□ -2.4
CALCOCO2-222ENST00000514006 ATP5EP2Q5VTU8 51 aa0.06□□□□□ -2.4
CALCOCO2-222ENST00000514006 C5orf42Q9H799 3197 aa0.06□□□□□ -2.4
CALCOCO2-222ENST00000514006 LAMA1P25391 3075 aa0.05□□□□□ -2.4
CALCOCO2-222ENST00000514006 SPTAN1Q13813 2472 aaKnown RBP0.05□□□□□ -2.4
CALCOCO2-222ENST00000514006 MGAQ8IWI9 3026 aa0.05□□□□□ -2.4
CALCOCO2-222ENST00000514006 KDM5DQ9BY66 1539 aa0.05□□□□□ -2.4
CALCOCO2-222ENST00000514006 PKD1P98161 4303 aa0.05□□□□□ -2.4
CALCOCO2-222ENST00000514006 UMAD1C9J7I0 102 aa0.05□□□□□ -2.4
CALCOCO2-222ENST00000514006 DEFB121Q5J5C9 76 aa0.05□□□□□ -2.4
CALCOCO2-222ENST00000514006 CSMD1Q96PZ7 3565 aa0.05□□□□□ -2.4
CALCOCO2-222ENST00000514006 LRP1BQ9NZR2 4599 aa0.05□□□□□ -2.4
CALCOCO2-222ENST00000514006 DNAH12Q6ZR08 3092 aa0.05□□□□□ -2.4
CALCOCO2-222ENST00000514006 CFAP47Q6ZTR5 3102 aa0.04□□□□□ -2.4
CALCOCO2-222ENST00000514006 NDUFA3O95167 84 aa0.04□□□□□ -2.4
CALCOCO2-222ENST00000514006 HECTD4Q9Y4D8 3996 aa0.04□□□□□ -2.4
CALCOCO2-222ENST00000514006 STARD9Q9P2P6 4700 aa0.04□□□□□ -2.4
CALCOCO2-222ENST00000514006 MKI67P46013 3256 aaKnown RBP0.04□□□□□ -2.4
CALCOCO2-222ENST00000514006 ABCC1P33527 1531 aa0.03□□□□□ -2.4
CALCOCO2-222ENST00000514006 RELNP78509 3460 aa0.03□□□□□ -2.4
CALCOCO2-222ENST00000514006 A0A087WXM4 84 aa0.03□□□□□ -2.4
CALCOCO2-222ENST00000514006 IFI6P09912 130 aa0.03□□□□□ -2.4
CALCOCO2-222ENST00000514006 IFI27P40305 119 aaPredicted RBP0.03□□□□□ -2.4
CALCOCO2-222ENST00000514006 BVES-AS1Q5T3Y7 98 aa0.03□□□□□ -2.4
CALCOCO2-222ENST00000514006 FRYLO94915 3013 aa0.03□□□□□ -2.4
CALCOCO2-222ENST00000514006 FRYQ5TBA9 3013 aa0.03□□□□□ -2.4
CALCOCO2-222ENST00000514006 DNAH1Q9P2D7 4330 aa0.02□□□□□ -2.41
CALCOCO2-222ENST00000514006 DEFB135Q30KP9 77 aa0.02□□□□□ -2.41
CALCOCO2-222ENST00000514006 CHD7Q9P2D1 2997 aa0.02□□□□□ -2.41
CALCOCO2-222ENST00000514006 NBPF19A0A087WUL8 3843 aa0.02□□□□□ -2.41
CALCOCO2-222ENST00000514006 CFAP43Q8NDM7 1665 aa0.02□□□□□ -2.41
CALCOCO2-222ENST00000514006 VCANP13611 3396 aa0.02□□□□□ -2.41
CALCOCO2-222ENST00000514006 PDE4DIPQ5VU43 2346 aa0.01□□□□□ -2.41
CALCOCO2-222ENST00000514006 PCNX1Q96RV3 2341 aa0.01□□□□□ -2.41
CALCOCO2-222ENST00000514006 DMXL1Q9Y485 3027 aa0.01□□□□□ -2.41
CALCOCO2-222ENST00000514006 CFAP74Q9C0B2 1584 aa0.01□□□□□ -2.41
CALCOCO2-222ENST00000514006 MUC3AQ02505 3323 aa0.01□□□□□ -2.41
CALCOCO2-222ENST00000514006 SZT2Q5T011 3432 aa0.01□□□□□ -2.41
CALCOCO2-222ENST00000514006 MYO15AQ9UKN7 3530 aa0□□□□□ -2.41
CALCOCO2-222ENST00000514006 LAMA5O15230 3695 aa0□□□□□ -2.41
CALCOCO2-222ENST00000514006 CENPFP49454 3210 aa0□□□□□ -2.41
CALCOCO2-222ENST00000514006 FAT1Q14517 4588 aa0□□□□□ -2.41
CALCOCO2-222ENST00000514006 VPS13AQ96RL7 3174 aa0□□□□□ -2.41
CALCOCO2-222ENST00000514006 LYSTQ99698 3801 aa0□□□□□ -2.41
CALCOCO2-222ENST00000514006 DYNC1H1Q14204 4646 aaKnown RBP-0□□□□□ -2.41
CALCOCO2-222ENST00000514006 ATMQ13315 3056 aa-0□□□□□ -2.41
CALCOCO2-222ENST00000514006 CUBNO60494 3623 aa-0.01□□□□□ -2.41
CALCOCO2-222ENST00000514006 LOC400499M0QZD8 3231 aa-0.01□□□□□ -2.41
CALCOCO2-222ENST00000514006 CCDC88BA6NC98 1476 aa-0.01□□□□□ -2.41
CALCOCO2-222ENST00000514006 SMIM13P0DJ93 91 aa-0.01□□□□□ -2.41
CALCOCO2-222ENST00000514006 NBASA2RRP1 2371 aa-0.01□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 95.3 ms