RNA–Protein interactions for RNA: ENST00000513984.5

VCAN-211, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-211ENST00000513984 KRTAP10-2P60368 255 aa9.2□□□□□ -0.94
VCAN-211ENST00000513984 DNAH5Q8TE73 4624 aa9.19□□□□□ -0.94
VCAN-211ENST00000513984 IGLV8-61A0A075B6I0 122 aa9.19□□□□□ -0.94
VCAN-211ENST00000513984 FAM236AA0A1B0GUQ0 79 aa9.19□□□□□ -0.94
VCAN-211ENST00000513984 FAM236BA0A1B0GV22 79 aa9.19□□□□□ -0.94
VCAN-211ENST00000513984 A0A1W2PNM2 257 aa9.19□□□□□ -0.94
VCAN-211ENST00000513984 Q8NBF4 154 aa9.18□□□□□ -0.94
VCAN-211ENST00000513984 ANAPC13Q9BS18 74 aa9.18□□□□□ -0.94
VCAN-211ENST00000513984 PSORS1C2Q9UIG4 136 aa9.17□□□□□ -0.94
VCAN-211ENST00000513984 FAT2Q9NYQ8 4349 aa9.17□□□□□ -0.94
VCAN-211ENST00000513984 SPRR4Q96PI1 79 aa9.17□□□□□ -0.94
VCAN-211ENST00000513984 HIST1H4AP62805 103 aaKnown RBP9.16□□□□□ -0.94
VCAN-211ENST00000513984 CXCL6P80162 114 aa9.16□□□□□ -0.94
VCAN-211ENST00000513984 HAMPP81172 84 aa9.15□□□□□ -0.94
VCAN-211ENST00000513984 PKD1P98161 4303 aa9.14□□□□□ -0.95
VCAN-211ENST00000513984 IGFL1Q6UW32 110 aa9.14□□□□□ -0.95
VCAN-211ENST00000513984 A0A087WVE0 104 aa9.13□□□□□ -0.95
VCAN-211ENST00000513984 SRRM2Q9UQ35 2752 aaKnown RBP9.13□□□□□ -0.95
VCAN-211ENST00000513984 SACSQ9NZJ4 4579 aa9.13□□□□□ -0.95
VCAN-211ENST00000513984 Q6ZSA8 131 aa9.12□□□□□ -0.95
VCAN-211ENST00000513984 FAM30AQ9NZY2 134 aa9.12□□□□□ -0.95
VCAN-211ENST00000513984 CRYGAP11844 174 aa9.12□□□□□ -0.95
VCAN-211ENST00000513984 NREPQ16612 68 aa9.12□□□□□ -0.95
VCAN-211ENST00000513984 CIRBP-AS1Q8TBR5 109 aa9.1□□□□□ -0.95
VCAN-211ENST00000513984 ZNF861PO60384 105 aa9.1□□□□□ -0.95
VCAN-211ENST00000513984 KRTAP10-1P60331 282 aa9.09□□□□□ -0.95
VCAN-211ENST00000513984 LINC00483Q53H64 154 aa9.09□□□□□ -0.95
VCAN-211ENST00000513984 ZNF706Q9Y5V0 76 aaPredicted RBP9.08□□□□□ -0.96
VCAN-211ENST00000513984 A0A0G2JQZ4 141 aa9.08□□□□□ -0.96
VCAN-211ENST00000513984 LCE6AA0A183 80 aa9.08□□□□□ -0.96
VCAN-211ENST00000513984 ATOX1O00244 68 aa9.07□□□□□ -0.96
VCAN-211ENST00000513984 SCXQ7RTU7 201 aa9.07□□□□□ -0.96
VCAN-211ENST00000513984 IGLV7-43P04211 117 aa9.05□□□□□ -0.96
VCAN-211ENST00000513984 KRTAP3-3Q9BYR6 98 aa9.05□□□□□ -0.96
VCAN-211ENST00000513984 KRTAP3-2Q9BYR7 98 aa9.05□□□□□ -0.96
VCAN-211ENST00000513984 BPY2O14599 106 aa9.05□□□□□ -0.96
VCAN-211ENST00000513984 LINC00336Q6ZUF6 198 aa9.01□□□□□ -0.97
VCAN-211ENST00000513984 A0A087WSZ3 146 aa9.01□□□□□ -0.97
VCAN-211ENST00000513984 IGKV4-1P06312 121 aa9.01□□□□□ -0.97
VCAN-211ENST00000513984 RPL37AP61513 92 aaKnown RBP9.01□□□□□ -0.97
VCAN-211ENST00000513984 CCDC179H3BU77 68 aa8.99□□□□□ -0.97
VCAN-211ENST00000513984 IGLV9-49A0A0B4J1Y8 123 aa8.98□□□□□ -0.97
VCAN-211ENST00000513984 C9orf153Q5TBE3 101 aa8.98□□□□□ -0.97
VCAN-211ENST00000513984 Q8N9L7 120 aa8.98□□□□□ -0.97
VCAN-211ENST00000513984 COX7CP15954 63 aa8.96□□□□□ -0.97
VCAN-211ENST00000513984 UQCRQO14949 82 aa8.96□□□□□ -0.98
VCAN-211ENST00000513984 SERP2Q8N6R1 65 aa8.96□□□□□ -0.98
VCAN-211ENST00000513984 DSCR10P59022 87 aa8.95□□□□□ -0.98
VCAN-211ENST00000513984 LRP1BQ9NZR2 4599 aa8.94□□□□□ -0.98
VCAN-211ENST00000513984 ANAPC11Q9NYG5 84 aa8.94□□□□□ -0.98
VCAN-211ENST00000513984 MOBPQ13875 183 aa8.93□□□□□ -0.98
VCAN-211ENST00000513984 A0A1B0GVY2 172 aa8.92□□□□□ -0.98
VCAN-211ENST00000513984 PKHD1P08F94 4074 aa8.92□□□□□ -0.98
VCAN-211ENST00000513984 SMIM20Q8N5G0 67 aa8.9□□□□□ -0.98
VCAN-211ENST00000513984 K7EQZ3 153 aa8.89□□□□□ -0.99
VCAN-211ENST00000513984 LINC00472Q9H8W2 130 aa8.89□□□□□ -0.99
VCAN-211ENST00000513984 RYR2Q92736 4967 aa8.89□□□□□ -0.99
VCAN-211ENST00000513984 TRAV7A0A075B6U4 112 aa8.87□□□□□ -0.99
VCAN-211ENST00000513984 DEFB116Q30KQ4 102 aa8.87□□□□□ -0.99
VCAN-211ENST00000513984 VPS13BQ7Z7G8 4022 aa8.85□□□□□ -0.99
VCAN-211ENST00000513984 SS18L2Q9UHA2 77 aa8.85□□□□□ -0.99
VCAN-211ENST00000513984 DYNC1H1Q14204 4646 aaKnown RBP8.84□□□□□ -0.99
VCAN-211ENST00000513984 HRCT1Q6UXD1 115 aa8.84□□□□□ -0.99
VCAN-211ENST00000513984 SSBP3-AS1Q7Z2R9 100 aa8.83□□□□□ -1
VCAN-211ENST00000513984 Q96NJ1 140 aa8.83□□□□□ -1
VCAN-211ENST00000513984 J3KT08 172 aa8.82□□□□□ -1
VCAN-211ENST00000513984 FAM229BQ4G0N7 80 aa8.82□□□□□ -1
VCAN-211ENST00000513984 KMT2CQ8NEZ4 4911 aaKnown RBP8.82□□□□□ -1
VCAN-211ENST00000513984 A8MWP4 228 aa8.82□□□□□ -1
VCAN-211ENST00000513984 HCG22E2RYF7 251 aa8.81□□□□□ -1
VCAN-211ENST00000513984 CD164Q04900 197 aa8.81□□□□□ -1
VCAN-211ENST00000513984 PRR15Q8IV56 129 aa8.8□□□□□ -1
VCAN-211ENST00000513984 OCR1Q9BZK8 76 aa8.8□□□□□ -1
VCAN-211ENST00000513984 A0A087X002 238 aa8.8□□□□□ -1
VCAN-211ENST00000513984 KRTAP1-4P0C5Y4 121 aa8.8□□□□□ -1
VCAN-211ENST00000513984 KRTAP13-2Q52LG2 175 aa8.78□□□□□ -1
VCAN-211ENST00000513984 CYSTM1Q9H1C7 97 aa8.76□□□□□ -1.01
VCAN-211ENST00000513984 APOBP04114 4563 aaKnown RBP8.76□□□□□ -1.01
VCAN-211ENST00000513984 C20orf197Q8N268 126 aa8.75□□□□□ -1.01
VCAN-211ENST00000513984 KRTAP29-1A8MX34 341 aaPredicted RBP8.74□□□□□ -1.01
VCAN-211ENST00000513984 SPINK6Q6UWN8 80 aa8.74□□□□□ -1.01
VCAN-211ENST00000513984 NDUFB1O75438 58 aa8.73□□□□□ -1.01
VCAN-211ENST00000513984 WFDC13Q8IUB5 93 aa8.73□□□□□ -1.01
VCAN-211ENST00000513984 KLKP1Q107X0 134 aa8.72□□□□□ -1.01
VCAN-211ENST00000513984 ASB16-AS1Q495Z4 193 aa8.71□□□□□ -1.01
VCAN-211ENST00000513984 SMR3BP02814 79 aaPredicted RBP8.7□□□□□ -1.02
VCAN-211ENST00000513984 MMP24-AS1A0A0U1RRL7 71 aa8.7□□□□□ -1.02
VCAN-211ENST00000513984 PLA2G1BP04054 148 aaKnown RBP8.7□□□□□ -1.02
VCAN-211ENST00000513984 CASC2Q6XLA1 102 aa8.7□□□□□ -1.02
VCAN-211ENST00000513984 KRTAP10-4P60372 401 aaPredicted RBP8.68□□□□□ -1.02
VCAN-211ENST00000513984 Q5XG85 94 aa8.68□□□□□ -1.02
VCAN-211ENST00000513984 TMEM254Q8TBM7 123 aa8.68□□□□□ -1.02
VCAN-211ENST00000513984 A0A1B0GVX0 72 aa8.68□□□□□ -1.02
VCAN-211ENST00000513984 CDK2AP2O75956 126 aa8.66□□□□□ -1.02
VCAN-211ENST00000513984 SNURFQ9Y675 71 aa8.66□□□□□ -1.02
VCAN-211ENST00000513984 TMEM258P61165 79 aa8.66□□□□□ -1.02
VCAN-211ENST00000513984 C8orf17Q9NRJ1 99 aa8.65□□□□□ -1.02
VCAN-211ENST00000513984 A0A0U1RQV1 116 aa8.64□□□□□ -1.03
VCAN-211ENST00000513984 hDV103S1A0JD37 113 aa8.64□□□□□ -1.03
VCAN-211ENST00000513984 TYMSOSQ8TAI1 123 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 862.8 ms