RNA–Protein interactions for RNA: ENST00000513578.5

RNF4-220, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-220ENST00000513578 SACSQ9NZJ4 4579 aa5.19□□□□□ -1.58
RNF4-220ENST00000513578 DNAH11Q96DT5 4516 aa5.19□□□□□ -1.58
RNF4-220ENST00000513578 Q6JHZ5 121 aa5.19□□□□□ -1.58
RNF4-220ENST00000513578 DPH3Q96FX2 82 aa5.19□□□□□ -1.58
RNF4-220ENST00000513578 HECTD4Q9Y4D8 3996 aa5.19□□□□□ -1.58
RNF4-220ENST00000513578 PRLHP81277 87 aa5.18□□□□□ -1.58
RNF4-220ENST00000513578 SMIM29Q86T20 159 aa5.18□□□□□ -1.58
RNF4-220ENST00000513578 ST20-AS1Q8NBB2 130 aa5.18□□□□□ -1.58
RNF4-220ENST00000513578 FRAS1Q86XX4 4008 aa5.18□□□□□ -1.58
RNF4-220ENST00000513578 IGLV8-61A0A075B6I0 122 aa5.17□□□□□ -1.58
RNF4-220ENST00000513578 ATP5EP2Q5VTU8 51 aa5.17□□□□□ -1.58
RNF4-220ENST00000513578 DEFB105AQ8NG35 78 aa5.17□□□□□ -1.58
RNF4-220ENST00000513578 LCE6AA0A183 80 aa5.16□□□□□ -1.58
RNF4-220ENST00000513578 A0A1B0GV72 72 aa5.16□□□□□ -1.58
RNF4-220ENST00000513578 UBE2AP49459 152 aa5.16□□□□□ -1.58
RNF4-220ENST00000513578 XP32Q5T750 250 aa5.16□□□□□ -1.58
RNF4-220ENST00000513578 Q6ZSA8 131 aa5.16□□□□□ -1.58
RNF4-220ENST00000513578 UBL5Q9BZL1 73 aa5.16□□□□□ -1.58
RNF4-220ENST00000513578 PCP4P48539 62 aa5.15□□□□□ -1.59
RNF4-220ENST00000513578 KRTAP10-2P60368 255 aa5.15□□□□□ -1.59
RNF4-220ENST00000513578 HIGD2AQ9BW72 106 aa5.15□□□□□ -1.59
RNF4-220ENST00000513578 DNAH5Q8TE73 4624 aa5.15□□□□□ -1.59
RNF4-220ENST00000513578 FAT2Q9NYQ8 4349 aa5.14□□□□□ -1.59
RNF4-220ENST00000513578 KIAA1109Q2LD37 5005 aa5.14□□□□□ -1.59
RNF4-220ENST00000513578 FUSP35637 526 aaKnown RBP eCLIP5.14□□□□□ -1.59
RNF4-220ENST00000513578 LINC00336Q6ZUF6 198 aa5.14□□□□□ -1.59
RNF4-220ENST00000513578 F8WEM9 126 aa5.13□□□□□ -1.59
RNF4-220ENST00000513578 C1orf137Q5JT78 98 aa5.13□□□□□ -1.59
RNF4-220ENST00000513578 Q8NBF4 154 aa5.13□□□□□ -1.59
RNF4-220ENST00000513578 SPRR4Q96PI1 79 aa5.13□□□□□ -1.59
RNF4-220ENST00000513578 PSORS1C2Q9UIG4 136 aa5.13□□□□□ -1.59
RNF4-220ENST00000513578 PKD1P98161 4303 aa5.12□□□□□ -1.59
RNF4-220ENST00000513578 ZNF861PO60384 105 aa5.12□□□□□ -1.59
RNF4-220ENST00000513578 LINC00483Q53H64 154 aa5.12□□□□□ -1.59
RNF4-220ENST00000513578 Q6ZVQ6 151 aa5.12□□□□□ -1.59
RNF4-220ENST00000513578 C3orf22Q8N5N4 141 aa5.12□□□□□ -1.59
RNF4-220ENST00000513578 ZNF706Q9Y5V0 76 aaPredicted RBP5.12□□□□□ -1.59
RNF4-220ENST00000513578 HERC1Q15751 4861 aa5.11□□□□□ -1.59
RNF4-220ENST00000513578 A0A1W2PNM2 257 aa5.11□□□□□ -1.59
RNF4-220ENST00000513578 RPL37AP61513 92 aaKnown RBP5.11□□□□□ -1.59
RNF4-220ENST00000513578 CXCL6P80162 114 aa5.11□□□□□ -1.59
RNF4-220ENST00000513578 CRYGAP11844 174 aa5.1□□□□□ -1.59
RNF4-220ENST00000513578 KRTAP10-1P60331 282 aa5.1□□□□□ -1.59
RNF4-220ENST00000513578 CIRBP-AS1Q8TBR5 109 aa5.1□□□□□ -1.59
RNF4-220ENST00000513578 FAM30AQ9NZY2 134 aa5.1□□□□□ -1.59
RNF4-220ENST00000513578 IGLV7-43P04211 117 aa5.09□□□□□ -1.59
RNF4-220ENST00000513578 IGFL1Q6UW32 110 aa5.09□□□□□ -1.59
RNF4-220ENST00000513578 ABCA13Q86UQ4 5058 aa5.09□□□□□ -1.59
RNF4-220ENST00000513578 IGKV3D-7A0A0C4DH55 119 aa5.08□□□□□ -1.6
RNF4-220ENST00000513578 HIST1H4AP62805 103 aaKnown RBP5.08□□□□□ -1.6
RNF4-220ENST00000513578 SCXQ7RTU7 201 aa5.08□□□□□ -1.6
RNF4-220ENST00000513578 NREPQ16612 68 aa5.07□□□□□ -1.6
RNF4-220ENST00000513578 A0A1B0GVY2 172 aa5.06□□□□□ -1.6
RNF4-220ENST00000513578 HAMPP81172 84 aa5.05□□□□□ -1.6
RNF4-220ENST00000513578 FAM236AA0A1B0GUQ0 79 aa5.04□□□□□ -1.6
RNF4-220ENST00000513578 FAM236BA0A1B0GV22 79 aa5.04□□□□□ -1.6
RNF4-220ENST00000513578 ATOX1O00244 68 aa5.03□□□□□ -1.6
RNF4-220ENST00000513578 ANAPC13Q9BS18 74 aa5.03□□□□□ -1.6
RNF4-220ENST00000513578 BPY2O14599 106 aa5.02□□□□□ -1.61
RNF4-220ENST00000513578 KRTAP4-8Q9BYQ9 185 aa5.02□□□□□ -1.61
RNF4-220ENST00000513578 A0A087WVE0 104 aa5.01□□□□□ -1.61
RNF4-220ENST00000513578 FAM229BQ4G0N7 80 aa5□□□□□ -1.61
RNF4-220ENST00000513578 SSBP3-AS1Q7Z2R9 100 aa5□□□□□ -1.61
RNF4-220ENST00000513578 DYNC1H1Q14204 4646 aaKnown RBP5□□□□□ -1.61
RNF4-220ENST00000513578 LRP1BQ9NZR2 4599 aa4.99□□□□□ -1.61
RNF4-220ENST00000513578 A0A087WSZ3 146 aa4.99□□□□□ -1.61
RNF4-220ENST00000513578 A0A0G2JQZ4 141 aa4.99□□□□□ -1.61
RNF4-220ENST00000513578 KRTAP9-6A0A140TA67 174 aa4.99□□□□□ -1.61
RNF4-220ENST00000513578 IGKV4-1P06312 121 aa4.99□□□□□ -1.61
RNF4-220ENST00000513578 CD164Q04900 197 aa4.99□□□□□ -1.61
RNF4-220ENST00000513578 C9orf153Q5TBE3 101 aa4.99□□□□□ -1.61
RNF4-220ENST00000513578 IGLV9-49A0A0B4J1Y8 123 aa4.98□□□□□ -1.61
RNF4-220ENST00000513578 DSCR10P59022 87 aa4.98□□□□□ -1.61
RNF4-220ENST00000513578 SMIM20Q8N5G0 67 aa4.98□□□□□ -1.61
RNF4-220ENST00000513578 LINC00472Q9H8W2 130 aa4.98□□□□□ -1.61
RNF4-220ENST00000513578 SRRM2Q9UQ35 2752 aaKnown RBP4.98□□□□□ -1.61
RNF4-220ENST00000513578 J3KT08 172 aa4.97□□□□□ -1.61
RNF4-220ENST00000513578 SS18L2Q9UHA2 77 aa4.97□□□□□ -1.61
RNF4-220ENST00000513578 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.96□□□□□ -1.62
RNF4-220ENST00000513578 COX7CP15954 63 aa4.96□□□□□ -1.62
RNF4-220ENST00000513578 MOBPQ13875 183 aa4.96□□□□□ -1.62
RNF4-220ENST00000513578 SERP2Q8N6R1 65 aa4.96□□□□□ -1.62
RNF4-220ENST00000513578 UQCRQO14949 82 aa4.95□□□□□ -1.62
RNF4-220ENST00000513578 SPINK6Q6UWN8 80 aa4.95□□□□□ -1.62
RNF4-220ENST00000513578 KRTAP9-2Q9BYQ4 174 aa4.95□□□□□ -1.62
RNF4-220ENST00000513578 KRTAP1-4P0C5Y4 121 aa4.94□□□□□ -1.62
RNF4-220ENST00000513578 ANAPC11Q9NYG5 84 aa4.94□□□□□ -1.62
RNF4-220ENST00000513578 TRAV7A0A075B6U4 112 aa4.93□□□□□ -1.62
RNF4-220ENST00000513578 APOBP04114 4563 aaKnown RBP4.93□□□□□ -1.62
RNF4-220ENST00000513578 ASB16-AS1Q495Z4 193 aa4.93□□□□□ -1.62
RNF4-220ENST00000513578 Q8N9L7 120 aa4.93□□□□□ -1.62
RNF4-220ENST00000513578 Q96NJ1 140 aa4.93□□□□□ -1.62
RNF4-220ENST00000513578 A8MWP4 228 aa4.92□□□□□ -1.62
RNF4-220ENST00000513578 CCDC179H3BU77 68 aa4.92□□□□□ -1.62
RNF4-220ENST00000513578 K7EQZ3 153 aa4.92□□□□□ -1.62
RNF4-220ENST00000513578 Q5XG85 94 aa4.92□□□□□ -1.62
RNF4-220ENST00000513578 KRTAP13-2Q52LG2 175 aa4.91□□□□□ -1.62
RNF4-220ENST00000513578 PRR15Q8IV56 129 aa4.91□□□□□ -1.62
RNF4-220ENST00000513578 PKHD1P08F94 4074 aa4.91□□□□□ -1.62
RNF4-220ENST00000513578 VPS13BQ7Z7G8 4022 aa4.9□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms