RNA–Protein interactions for RNA: ENST00000513438.1

POLR2J3-217, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 3 BASIC

Gene POLR2J3, Length 546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-217ENST00000513438 KRTDAPP60985 99 aa7.12□□□□□ -1.27
POLR2J3-217ENST00000513438 A4D1N5 150 aa7.11□□□□□ -1.27
POLR2J3-217ENST00000513438 Q6ZVH6 145 aa7.11□□□□□ -1.27
POLR2J3-217ENST00000513438 TCL1BO95988 128 aa7.1□□□□□ -1.27
POLR2J3-217ENST00000513438 COX6B2Q6YFQ2 88 aa7.1□□□□□ -1.27
POLR2J3-217ENST00000513438 SVIPQ8NHG7 77 aa7.1□□□□□ -1.27
POLR2J3-217ENST00000513438 SMIM11BQ8TCY0 68 aa7.09□□□□□ -1.27
POLR2J3-217ENST00000513438 NHP2Q9NX24 153 aaKnown RBP7.09□□□□□ -1.27
POLR2J3-217ENST00000513438 TRAV13-2A0A0B4J235 113 aa7.08□□□□□ -1.28
POLR2J3-217ENST00000513438 PCP2Q8IVA1 136 aa7.08□□□□□ -1.28
POLR2J3-217ENST00000513438 ATOH7Q8N100 152 aa7.08□□□□□ -1.28
POLR2J3-217ENST00000513438 HIST3H2BBQ8N257 126 aa7.07□□□□□ -1.28
POLR2J3-217ENST00000513438 C20orf202A1L168 122 aa7.06□□□□□ -1.28
POLR2J3-217ENST00000513438 M0R143 59 aa7.06□□□□□ -1.28
POLR2J3-217ENST00000513438 DLEU1O43261 78 aa7.06□□□□□ -1.28
POLR2J3-217ENST00000513438 COA6Q5JTJ3 125 aaKnown RBP7.06□□□□□ -1.28
POLR2J3-217ENST00000513438 F8WEM9 126 aa7.05□□□□□ -1.28
POLR2J3-217ENST00000513438 VAMP3Q15836 100 aa7.04□□□□□ -1.28
POLR2J3-217ENST00000513438 FLGP20930 4061 aaPredicted RBP7.03□□□□□ -1.28
POLR2J3-217ENST00000513438 C21orf62-AS1Q17RA5 79 aa7.03□□□□□ -1.28
POLR2J3-217ENST00000513438 LINC00575Q6W349 94 aa7.03□□□□□ -1.28
POLR2J3-217ENST00000513438 TMEM238LA0A1B0GVL6 79 aa7.01□□□□□ -1.29
POLR2J3-217ENST00000513438 hADV29S1A0JD25 119 aa7.01□□□□□ -1.29
POLR2J3-217ENST00000513438 Q6JHZ5 121 aa7.01□□□□□ -1.29
POLR2J3-217ENST00000513438 TRBV7-7A0A0K0K1E9 115 aa7□□□□□ -1.29
POLR2J3-217ENST00000513438 IGFL1Q6UW32 110 aa7□□□□□ -1.29
POLR2J3-217ENST00000513438 Q6ZQY7 126 aa7□□□□□ -1.29
POLR2J3-217ENST00000513438 OCIAD2Q56VL3 154 aa6.99□□□□□ -1.29
POLR2J3-217ENST00000513438 HIST1H2BLQ99880 126 aa6.99□□□□□ -1.29
POLR2J3-217ENST00000513438 Q6Q795 121 aa6.98□□□□□ -1.29
POLR2J3-217ENST00000513438 ATP11AUNQ6ZP68 121 aa6.98□□□□□ -1.29
POLR2J3-217ENST00000513438 CLEC2BQ92478 149 aa6.98□□□□□ -1.29
POLR2J3-217ENST00000513438 OBSCN-AS1Q96MR7 158 aa6.98□□□□□ -1.29
POLR2J3-217ENST00000513438 SNHG12Q9BXW3 62 aa6.98□□□□□ -1.29
POLR2J3-217ENST00000513438 Q75L30 129 aa6.96□□□□□ -1.3
POLR2J3-217ENST00000513438 KRTAP9-7A8MTY7 169 aa6.95□□□□□ -1.3
POLR2J3-217ENST00000513438 HSBP1L1C9JCN9 74 aa6.95□□□□□ -1.3
POLR2J3-217ENST00000513438 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.94□□□□□ -1.3
POLR2J3-217ENST00000513438 LST1O00453 97 aa6.93□□□□□ -1.3
POLR2J3-217ENST00000513438 COL5A1-AS1Q5SY13 56 aa6.93□□□□□ -1.3
POLR2J3-217ENST00000513438 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.92□□□□□ -1.3
POLR2J3-217ENST00000513438 Q96NJ1 140 aa6.92□□□□□ -1.3
POLR2J3-217ENST00000513438 H3BUT2 72 aa6.91□□□□□ -1.3
POLR2J3-217ENST00000513438 PPDPFLQ8WWR9 84 aa6.91□□□□□ -1.3
POLR2J3-217ENST00000513438 BVES-AS1Q5T3Y7 98 aa6.9□□□□□ -1.3
POLR2J3-217ENST00000513438 SCGB1D1O95968 90 aa6.88□□□□□ -1.31
POLR2J3-217ENST00000513438 HIST1H4GQ99525 98 aa6.87□□□□□ -1.31
POLR2J3-217ENST00000513438 SS18L2Q9UHA2 77 aa6.86□□□□□ -1.31
POLR2J3-217ENST00000513438 UBE2V1Q13404 147 aa6.85□□□□□ -1.31
POLR2J3-217ENST00000513438 C20orf166-AS1Q96NR2 134 aa6.85□□□□□ -1.31
POLR2J3-217ENST00000513438 A8MUU9 505 aa6.84□□□□□ -1.31
POLR2J3-217ENST00000513438 CFC1P0CG37 223 aa6.84□□□□□ -1.31
POLR2J3-217ENST00000513438 TEN1Q86WV5 123 aa6.84□□□□□ -1.31
POLR2J3-217ENST00000513438 KRTAP9-8Q9BYQ0 159 aa6.84□□□□□ -1.31
POLR2J3-217ENST00000513438 TRBV20-1A0A075B6N2 111 aa6.82□□□□□ -1.32
POLR2J3-217ENST00000513438 NDUFV3P56181 108 aaKnown RBP6.82□□□□□ -1.32
POLR2J3-217ENST00000513438 VAMP8Q9BV40 100 aa6.82□□□□□ -1.32
POLR2J3-217ENST00000513438 A0A087WSZ3 146 aa6.81□□□□□ -1.32
POLR2J3-217ENST00000513438 SNCGO76070 127 aa6.81□□□□□ -1.32
POLR2J3-217ENST00000513438 UQCR10Q9UDW1 63 aa6.81□□□□□ -1.32
POLR2J3-217ENST00000513438 USH2AO75445 5202 aa6.81□□□□□ -1.32
POLR2J3-217ENST00000513438 H0YGX0 51 aa6.8□□□□□ -1.32
POLR2J3-217ENST00000513438 COX8AP10176 69 aa6.8□□□□□ -1.32
POLR2J3-217ENST00000513438 SSPOA2VEC9 5147 aa6.79□□□□□ -1.32
POLR2J3-217ENST00000513438 DSCR10P59022 87 aa6.79□□□□□ -1.32
POLR2J3-217ENST00000513438 RAB37Q96AX2 223 aa6.79□□□□□ -1.32
POLR2J3-217ENST00000513438 FAM218AQ96MZ4 157 aa6.79□□□□□ -1.32
POLR2J3-217ENST00000513438 H3BMG7 143 aa6.78□□□□□ -1.32
POLR2J3-217ENST00000513438 K7ERU9 68 aa6.78□□□□□ -1.32
POLR2J3-217ENST00000513438 VPS25Q9BRG1 176 aa6.78□□□□□ -1.32
POLR2J3-217ENST00000513438 A6NJY4 79 aa6.76□□□□□ -1.33
POLR2J3-217ENST00000513438 KRTAP16-1A8MUX0 517 aa6.76□□□□□ -1.33
POLR2J3-217ENST00000513438 SCGB1A1P11684 91 aa6.76□□□□□ -1.33
POLR2J3-217ENST00000513438 FABP2P12104 132 aa6.75□□□□□ -1.33
POLR2J3-217ENST00000513438 BATFQ16520 125 aa6.75□□□□□ -1.33
POLR2J3-217ENST00000513438 A0A0B4J2C4 111 aa6.74□□□□□ -1.33
POLR2J3-217ENST00000513438 A0A1W2PNM2 257 aa6.74□□□□□ -1.33
POLR2J3-217ENST00000513438 LINC00313P59037 77 aa6.74□□□□□ -1.33
POLR2J3-217ENST00000513438 GHRHP01286 108 aa6.73□□□□□ -1.33
POLR2J3-217ENST00000513438 SIGMAR1Q99720 223 aa6.73□□□□□ -1.33
POLR2J3-217ENST00000513438 FAM236DA0A1B0GTK5 79 aa6.72□□□□□ -1.33
POLR2J3-217ENST00000513438 A0A1B0GX51 115 aa6.72□□□□□ -1.33
POLR2J3-217ENST00000513438 FAM236CP0DP71 79 aa6.72□□□□□ -1.33
POLR2J3-217ENST00000513438 SPATA45Q537H7 98 aa6.72□□□□□ -1.33
POLR2J3-217ENST00000513438 HIGD1BQ9P298 99 aa6.72□□□□□ -1.33
POLR2J3-217ENST00000513438 PAM16Q9Y3D7 125 aa6.72□□□□□ -1.33
POLR2J3-217ENST00000513438 MT2AP02795 61 aa6.71□□□□□ -1.34
POLR2J3-217ENST00000513438 IGKV4-1P06312 121 aa6.7□□□□□ -1.34
POLR2J3-217ENST00000513438 C2orf91Q6ZV80 131 aa6.69□□□□□ -1.34
POLR2J3-217ENST00000513438 PRO1854Q9UHT4 67 aa6.69□□□□□ -1.34
POLR2J3-217ENST00000513438 FCGBPQ9Y6R7 5405 aaPredicted RBP6.68□□□□□ -1.34
POLR2J3-217ENST00000513438 NOTCH2NLQ7Z3S9 236 aa6.68□□□□□ -1.34
POLR2J3-217ENST00000513438 CEND1Q8N111 149 aa6.68□□□□□ -1.34
POLR2J3-217ENST00000513438 ANKRD29Q8N6D5 301 aa6.68□□□□□ -1.34
POLR2J3-217ENST00000513438 A0A1B0GV72 72 aa6.67□□□□□ -1.34
POLR2J3-217ENST00000513438 HRES1P13985 223 aa6.67□□□□□ -1.34
POLR2J3-217ENST00000513438 DEFB116Q30KQ4 102 aa6.67□□□□□ -1.34
POLR2J3-217ENST00000513438 KRTAP19-1Q8IUB9 90 aa6.67□□□□□ -1.34
POLR2J3-217ENST00000513438 MPLKIPQ8TAP9 179 aa6.67□□□□□ -1.34
POLR2J3-217ENST00000513438 RBM12B-AS1Q9P1G2 102 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms