RNA–Protein interactions for RNA: ENST00000513318.1

HMGXB3-204, Transcript of HMG-box containing 3, humanhuman

TSL 3

Gene HMGXB3, Length 749 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-204ENST00000513318 ABCA13Q86UQ4 5058 aa4.53□□□□□ -1.68
HMGXB3-204ENST00000513318 FAT3Q8TDW7 4589 aa4.52□□□□□ -1.69
HMGXB3-204ENST00000513318 TAX1BP3O14907 124 aa4.52□□□□□ -1.69
HMGXB3-204ENST00000513318 TRIAP1O43715 76 aa4.52□□□□□ -1.69
HMGXB3-204ENST00000513318 COX6CP09669 75 aa4.52□□□□□ -1.69
HMGXB3-204ENST00000513318 PSMB2P49721 201 aa4.52□□□□□ -1.69
HMGXB3-204ENST00000513318 MYCBP2O75592 4640 aa4.52□□□□□ -1.69
HMGXB3-204ENST00000513318 LRP1Q07954 4544 aaKnown RBP4.51□□□□□ -1.69
HMGXB3-204ENST00000513318 hADV29S1A0JD25 119 aa4.51□□□□□ -1.69
HMGXB3-204ENST00000513318 SNCGO76070 127 aa4.51□□□□□ -1.69
HMGXB3-204ENST00000513318 CRYGAP11844 174 aa4.51□□□□□ -1.69
HMGXB3-204ENST00000513318 LINC00483Q53H64 154 aa4.51□□□□□ -1.69
HMGXB3-204ENST00000513318 GAGE2AQ6NT46 116 aa4.51□□□□□ -1.69
HMGXB3-204ENST00000513318 A0A087X002 238 aa4.5□□□□□ -1.69
HMGXB3-204ENST00000513318 A0A1B0GX51 115 aa4.5□□□□□ -1.69
HMGXB3-204ENST00000513318 SPRR1BP22528 89 aa4.5□□□□□ -1.69
HMGXB3-204ENST00000513318 PRR26Q8N8Z3 221 aa4.5□□□□□ -1.69
HMGXB3-204ENST00000513318 ST20-AS1Q8NBB2 130 aa4.5□□□□□ -1.69
HMGXB3-204ENST00000513318 ANAPC11Q9NYG5 84 aa4.5□□□□□ -1.69
HMGXB3-204ENST00000513318 IGLV5-48A0A075B6I7 105 aa4.49□□□□□ -1.69
HMGXB3-204ENST00000513318 MT1HL1P0DM35 61 aa4.49□□□□□ -1.69
HMGXB3-204ENST00000513318 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.49□□□□□ -1.69
HMGXB3-204ENST00000513318 Q6ZQY7 126 aa4.49□□□□□ -1.69
HMGXB3-204ENST00000513318 FAM218AQ96MZ4 157 aa4.49□□□□□ -1.69
HMGXB3-204ENST00000513318 PCLOQ9Y6V0 5065 aa4.49□□□□□ -1.69
HMGXB3-204ENST00000513318 DMBT1Q9UGM3 2413 aaPredicted RBP4.48□□□□□ -1.69
HMGXB3-204ENST00000513318 TEX49A0A1B0GTD5 131 aa4.48□□□□□ -1.69
HMGXB3-204ENST00000513318 LINC01547P58512 204 aaPredicted RBP4.48□□□□□ -1.69
HMGXB3-204ENST00000513318 KRTAP10-8P60410 259 aa4.48□□□□□ -1.69
HMGXB3-204ENST00000513318 KRTAP13-2Q52LG2 175 aa4.48□□□□□ -1.69
HMGXB3-204ENST00000513318 KRTAP5-3Q6L8H2 238 aa4.48□□□□□ -1.69
HMGXB3-204ENST00000513318 TYMSOSQ8TAI1 123 aa4.48□□□□□ -1.69
HMGXB3-204ENST00000513318 CLEC2BQ92478 149 aa4.48□□□□□ -1.69
HMGXB3-204ENST00000513318 TNXBP22105 4242 aa4.47□□□□□ -1.69
HMGXB3-204ENST00000513318 DNAL4O96015 105 aa4.47□□□□□ -1.69
HMGXB3-204ENST00000513318 SCGB1C2P0DMR2 95 aa4.47□□□□□ -1.69
HMGXB3-204ENST00000513318 OCIAD2Q56VL3 154 aa4.47□□□□□ -1.69
HMGXB3-204ENST00000513318 LYRM7Q5U5X0 104 aa4.47□□□□□ -1.69
HMGXB3-204ENST00000513318 C3orf22Q8N5N4 141 aa4.47□□□□□ -1.69
HMGXB3-204ENST00000513318 DEFB105AQ8NG35 78 aa4.47□□□□□ -1.69
HMGXB3-204ENST00000513318 PPDPFLQ8WWR9 84 aa4.47□□□□□ -1.69
HMGXB3-204ENST00000513318 IGLV9-49A0A0B4J1Y8 123 aa4.46□□□□□ -1.7
HMGXB3-204ENST00000513318 NAA38Q9BRA0 125 aaKnown RBP4.46□□□□□ -1.7
HMGXB3-204ENST00000513318 LAMTOR3Q9UHA4 124 aa4.46□□□□□ -1.7
HMGXB3-204ENST00000513318 H3BUT2 72 aa4.45□□□□□ -1.7
HMGXB3-204ENST00000513318 LST1O00453 97 aa4.45□□□□□ -1.7
HMGXB3-204ENST00000513318 TRACP01848 142 aa4.45□□□□□ -1.7
HMGXB3-204ENST00000513318 UBE2V1Q13404 147 aa4.45□□□□□ -1.7
HMGXB3-204ENST00000513318 MOBPQ13875 183 aa4.45□□□□□ -1.7
HMGXB3-204ENST00000513318 C9orf153Q5TBE3 101 aa4.45□□□□□ -1.7
HMGXB3-204ENST00000513318 Q8N377 158 aa4.45□□□□□ -1.7
HMGXB3-204ENST00000513318 Q8NBF4 154 aa4.45□□□□□ -1.7
HMGXB3-204ENST00000513318 F8WEM9 126 aa4.44□□□□□ -1.7
HMGXB3-204ENST00000513318 H3BQ85 93 aa4.44□□□□□ -1.7
HMGXB3-204ENST00000513318 SSBP3-AS1Q7Z2R9 100 aa4.44□□□□□ -1.7
HMGXB3-204ENST00000513318 SMIM29Q86T20 159 aa4.44□□□□□ -1.7
HMGXB3-204ENST00000513318 ORMDL1Q9P0S3 153 aa4.44□□□□□ -1.7
HMGXB3-204ENST00000513318 TRBV20-1A0A075B6N2 111 aa4.43□□□□□ -1.7
HMGXB3-204ENST00000513318 A0A1W2PPM0 123 aa4.43□□□□□ -1.7
HMGXB3-204ENST00000513318 TCL1BO95988 128 aa4.43□□□□□ -1.7
HMGXB3-204ENST00000513318 ATXN8Q156A1 80 aa4.43□□□□□ -1.7
HMGXB3-204ENST00000513318 LINC00304Q8N9R0 145 aa4.43□□□□□ -1.7
HMGXB3-204ENST00000513318 K7EP34 96 aa4.41□□□□□ -1.7
HMGXB3-204ENST00000513318 TMEM256-PLSCR3K7ERE1 68 aa4.41□□□□□ -1.7
HMGXB3-204ENST00000513318 FABP2P12104 132 aa4.41□□□□□ -1.7
HMGXB3-204ENST00000513318 NDUFV3P56181 108 aaKnown RBP4.41□□□□□ -1.7
HMGXB3-204ENST00000513318 SPAG11AQ6PDA7 123 aa4.41□□□□□ -1.7
HMGXB3-204ENST00000513318 IGLV8-61A0A075B6I0 122 aa4.4□□□□□ -1.71
HMGXB3-204ENST00000513318 Q6JHZ5 121 aa4.4□□□□□ -1.71
HMGXB3-204ENST00000513318 SPINK1P00995 79 aa4.39□□□□□ -1.71
HMGXB3-204ENST00000513318 SPCS1Q9Y6A9 102 aa4.39□□□□□ -1.71
HMGXB3-204ENST00000513318 RPS29P62273 56 aaKnown RBP4.38□□□□□ -1.71
HMGXB3-204ENST00000513318 CD164Q04900 197 aa4.38□□□□□ -1.71
HMGXB3-204ENST00000513318 GTF2H5Q6ZYL4 71 aa4.38□□□□□ -1.71
HMGXB3-204ENST00000513318 KRTAP9-8Q9BYQ0 159 aa4.38□□□□□ -1.71
HMGXB3-204ENST00000513318 C9JAW5 83 aa4.37□□□□□ -1.71
HMGXB3-204ENST00000513318 H3BMG7 143 aa4.37□□□□□ -1.71
HMGXB3-204ENST00000513318 BAALC-AS2P0C853 105 aa4.37□□□□□ -1.71
HMGXB3-204ENST00000513318 IGFL1Q6UW32 110 aa4.37□□□□□ -1.71
HMGXB3-204ENST00000513318 H3BT86 120 aa4.36□□□□□ -1.71
HMGXB3-204ENST00000513318 ANKRD29Q8N6D5 301 aa4.36□□□□□ -1.71
HMGXB3-204ENST00000513318 LIMD2Q9BT23 127 aa4.36□□□□□ -1.71
HMGXB3-204ENST00000513318 KRTAP15-1Q3LI76 137 aa4.35□□□□□ -1.71
HMGXB3-204ENST00000513318 HRCT1Q6UXD1 115 aa4.35□□□□□ -1.71
HMGXB3-204ENST00000513318 PRO0461Q9UI25 63 aa4.35□□□□□ -1.71
HMGXB3-204ENST00000513318 A0A0G2JQZ4 141 aa4.34□□□□□ -1.71
HMGXB3-204ENST00000513318 Q6Q795 121 aa4.34□□□□□ -1.71
HMGXB3-204ENST00000513318 A0A1B0GV72 72 aa4.33□□□□□ -1.72
HMGXB3-204ENST00000513318 JMJD7-PLA2G4BH0Y9G9 81 aa4.33□□□□□ -1.72
HMGXB3-204ENST00000513318 RBM3P98179 157 aaKnown RBP4.33□□□□□ -1.72
HMGXB3-204ENST00000513318 Q5XG85 94 aa4.33□□□□□ -1.72
HMGXB3-204ENST00000513318 TEN1Q86WV5 123 aa4.33□□□□□ -1.72
HMGXB3-204ENST00000513318 MTURNQ8N3F0 131 aa4.33□□□□□ -1.72
HMGXB3-204ENST00000513318 DSCR8Q96T75 97 aa4.33□□□□□ -1.72
HMGXB3-204ENST00000513318 TRBV7-4A0A0J9YYF1 115 aa4.32□□□□□ -1.72
HMGXB3-204ENST00000513318 TRBV7-7A0A0K0K1E9 115 aa4.32□□□□□ -1.72
HMGXB3-204ENST00000513318 F8W1H4 67 aa4.32□□□□□ -1.72
HMGXB3-204ENST00000513318 RETNLBQ9BQ08 111 aa4.31□□□□□ -1.72
HMGXB3-204ENST00000513318 SS18L2Q9UHA2 77 aa4.31□□□□□ -1.72
HMGXB3-204ENST00000513318 A0A1W2PNM2 257 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms