RNA–Protein interactions for RNA: ENST00000513143.5

PDPN-210, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-210ENST00000513143 GHRHP01286 108 aa7.51□□□□□ -1.21
PDPN-210ENST00000513143 KRTAP1-4P0C5Y4 121 aa7.51□□□□□ -1.21
PDPN-210ENST00000513143 LINC01547P58512 204 aaPredicted RBP7.51□□□□□ -1.21
PDPN-210ENST00000513143 DNAL4O96015 105 aa7.5□□□□□ -1.21
PDPN-210ENST00000513143 SPRR1BP22528 89 aa7.5□□□□□ -1.21
PDPN-210ENST00000513143 LINC00483Q53H64 154 aa7.5□□□□□ -1.21
PDPN-210ENST00000513143 OCIAD2Q56VL3 154 aa7.5□□□□□ -1.21
PDPN-210ENST00000513143 GAGE2AQ6NT46 116 aa7.5□□□□□ -1.21
PDPN-210ENST00000513143 TEX49A0A1B0GTD5 131 aa7.49□□□□□ -1.21
PDPN-210ENST00000513143 DEFB105AQ8NG35 78 aa7.49□□□□□ -1.21
PDPN-210ENST00000513143 SPCS1Q9Y6A9 102 aa7.49□□□□□ -1.21
PDPN-210ENST00000513143 Q8N377 158 aa7.48□□□□□ -1.21
PDPN-210ENST00000513143 LCE1DQ5T752 114 aa7.47□□□□□ -1.21
PDPN-210ENST00000513143 PPDPFLQ8WWR9 84 aa7.47□□□□□ -1.21
PDPN-210ENST00000513143 ANAPC11Q9NYG5 84 aa7.47□□□□□ -1.21
PDPN-210ENST00000513143 ORMDL1Q9P0S3 153 aa7.47□□□□□ -1.21
PDPN-210ENST00000513143 H3BMG7 143 aa7.46□□□□□ -1.22
PDPN-210ENST00000513143 H3BQ85 93 aa7.46□□□□□ -1.22
PDPN-210ENST00000513143 FAM229BQ4G0N7 80 aa7.46□□□□□ -1.22
PDPN-210ENST00000513143 KRTAP4-7Q9BYR0 210 aa7.46□□□□□ -1.22
PDPN-210ENST00000513143 FLG2Q5D862 2391 aaPredicted RBP7.45□□□□□ -1.22
PDPN-210ENST00000513143 K7EP34 96 aa7.45□□□□□ -1.22
PDPN-210ENST00000513143 SMIM29Q86T20 159 aa7.45□□□□□ -1.22
PDPN-210ENST00000513143 A0A087X002 238 aa7.43□□□□□ -1.22
PDPN-210ENST00000513143 C9JAW5 83 aa7.43□□□□□ -1.22
PDPN-210ENST00000513143 TMEM256-PLSCR3K7ERE1 68 aa7.43□□□□□ -1.22
PDPN-210ENST00000513143 BAALC-AS2P0C853 105 aa7.43□□□□□ -1.22
PDPN-210ENST00000513143 CRYGAP11844 174 aa7.43□□□□□ -1.22
PDPN-210ENST00000513143 GTF2H5Q6ZYL4 71 aa7.43□□□□□ -1.22
PDPN-210ENST00000513143 LINC01600Q96MT4 127 aa7.43□□□□□ -1.22
PDPN-210ENST00000513143 C3orf22Q8N5N4 141 aa7.42□□□□□ -1.22
PDPN-210ENST00000513143 LAMTOR3Q9UHA4 124 aa7.42□□□□□ -1.22
PDPN-210ENST00000513143 LRP1Q07954 4544 aaKnown RBP7.41□□□□□ -1.22
PDPN-210ENST00000513143 ABCA13Q86UQ4 5058 aa7.41□□□□□ -1.22
PDPN-210ENST00000513143 FAT3Q8TDW7 4589 aa7.4□□□□□ -1.22
PDPN-210ENST00000513143 UBE2V1Q13404 147 aa7.4□□□□□ -1.22
PDPN-210ENST00000513143 KRTAP13-2Q52LG2 175 aa7.4□□□□□ -1.22
PDPN-210ENST00000513143 PRR26Q8N8Z3 221 aa7.4□□□□□ -1.22
PDPN-210ENST00000513143 A0A1B0GV90 55 aa7.39□□□□□ -1.23
PDPN-210ENST00000513143 NDUFV3P56181 108 aaKnown RBP7.39□□□□□ -1.23
PDPN-210ENST00000513143 IGLV9-49A0A0B4J1Y8 123 aa7.38□□□□□ -1.23
PDPN-210ENST00000513143 H3BT86 120 aa7.38□□□□□ -1.23
PDPN-210ENST00000513143 OXTP01178 125 aa7.38□□□□□ -1.23
PDPN-210ENST00000513143 MTURNQ8N3F0 131 aa7.38□□□□□ -1.23
PDPN-210ENST00000513143 MYCBP2O75592 4640 aa7.38□□□□□ -1.23
PDPN-210ENST00000513143 F8WEM9 126 aa7.37□□□□□ -1.23
PDPN-210ENST00000513143 PRO0461Q9UI25 63 aa7.37□□□□□ -1.23
PDPN-210ENST00000513143 IGLV8-61A0A075B6I0 122 aa7.36□□□□□ -1.23
PDPN-210ENST00000513143 KRTAP29-1A8MX34 341 aaPredicted RBP7.36□□□□□ -1.23
PDPN-210ENST00000513143 KRTAP10-8P60410 259 aa7.36□□□□□ -1.23
PDPN-210ENST00000513143 MOBPQ13875 183 aa7.36□□□□□ -1.23
PDPN-210ENST00000513143 ANKRD29Q8N6D5 301 aa7.36□□□□□ -1.23
PDPN-210ENST00000513143 Q8NBF4 154 aa7.36□□□□□ -1.23
PDPN-210ENST00000513143 TYMSOSQ8TAI1 123 aa7.36□□□□□ -1.23
PDPN-210ENST00000513143 C9orf153Q5TBE3 101 aa7.35□□□□□ -1.23
PDPN-210ENST00000513143 SSBP3-AS1Q7Z2R9 100 aa7.35□□□□□ -1.23
PDPN-210ENST00000513143 MT1HL1P0DM35 61 aa7.33□□□□□ -1.24
PDPN-210ENST00000513143 F8W1H4 67 aa7.32□□□□□ -1.24
PDPN-210ENST00000513143 Q6JHZ5 121 aa7.32□□□□□ -1.24
PDPN-210ENST00000513143 TNXBP22105 4242 aa7.32□□□□□ -1.24
PDPN-210ENST00000513143 JMJD7-PLA2G4BH0Y9G9 81 aa7.31□□□□□ -1.24
PDPN-210ENST00000513143 OBSCN-AS1Q96MR7 158 aa7.31□□□□□ -1.24
PDPN-210ENST00000513143 RBM3P98179 157 aaKnown RBP7.3□□□□□ -1.24
PDPN-210ENST00000513143 IGFL1Q6UW32 110 aa7.3□□□□□ -1.24
PDPN-210ENST00000513143 A0A1B0GV72 72 aa7.29□□□□□ -1.24
PDPN-210ENST00000513143 A0A0G2JQZ4 141 aa7.28□□□□□ -1.24
PDPN-210ENST00000513143 TRBV7-4A0A0J9YYF1 115 aa7.28□□□□□ -1.24
PDPN-210ENST00000513143 LINC00304Q8N9R0 145 aa7.27□□□□□ -1.24
PDPN-210ENST00000513143 DSCR8Q96T75 97 aa7.27□□□□□ -1.24
PDPN-210ENST00000513143 KRTAP4-9Q9BYQ8 210 aa7.27□□□□□ -1.24
PDPN-210ENST00000513143 PCLOQ9Y6V0 5065 aa7.27□□□□□ -1.25
PDPN-210ENST00000513143 SPAG11AQ6PDA7 123 aa7.27□□□□□ -1.25
PDPN-210ENST00000513143 CD164Q04900 197 aa7.26□□□□□ -1.25
PDPN-210ENST00000513143 SVIPQ8NHG7 77 aa7.26□□□□□ -1.25
PDPN-210ENST00000513143 DMBT1Q9UGM3 2413 aaPredicted RBP7.25□□□□□ -1.25
PDPN-210ENST00000513143 LOC110117498A0A087WWA1 95 aa7.25□□□□□ -1.25
PDPN-210ENST00000513143 TEN1Q86WV5 123 aa7.25□□□□□ -1.25
PDPN-210ENST00000513143 C14orf132Q9NPU4 83 aa7.25□□□□□ -1.25
PDPN-210ENST00000513143 SPINK1P00995 79 aa7.24□□□□□ -1.25
PDPN-210ENST00000513143 PDE6GP18545 87 aa7.24□□□□□ -1.25
PDPN-210ENST00000513143 ETDBQ3ZM63 59 aa7.24□□□□□ -1.25
PDPN-210ENST00000513143 Q6Q795 121 aa7.24□□□□□ -1.25
PDPN-210ENST00000513143 A0A1W2PNM2 257 aa7.23□□□□□ -1.25
PDPN-210ENST00000513143 HRCT1Q6UXD1 115 aa7.23□□□□□ -1.25
PDPN-210ENST00000513143 Q6ZQT0 140 aa7.23□□□□□ -1.25
PDPN-210ENST00000513143 CCKP06307 115 aa7.22□□□□□ -1.25
PDPN-210ENST00000513143 RPS29P62273 56 aaKnown RBP7.21□□□□□ -1.26
PDPN-210ENST00000513143 TRBV7-7A0A0K0K1E9 115 aa7.2□□□□□ -1.26
PDPN-210ENST00000513143 C21orf62-AS1Q17RA5 79 aa7.2□□□□□ -1.26
PDPN-210ENST00000513143 LCE4AQ5TA78 99 aa7.18□□□□□ -1.26
PDPN-210ENST00000513143 Q5XG85 94 aa7.18□□□□□ -1.26
PDPN-210ENST00000513143 VPS25Q9BRG1 176 aa7.18□□□□□ -1.26
PDPN-210ENST00000513143 A0A1B0GW54 56 aa7.17□□□□□ -1.26
PDPN-210ENST00000513143 LIMD2Q9BT23 127 aa7.17□□□□□ -1.26
PDPN-210ENST00000513143 A0A087WSZ3 146 aa7.15□□□□□ -1.26
PDPN-210ENST00000513143 KRTAP4-2Q9BYR5 136 aa7.15□□□□□ -1.26
PDPN-210ENST00000513143 ASB16-AS1Q495Z4 193 aa7.13□□□□□ -1.27
PDPN-210ENST00000513143 SS18L2Q9UHA2 77 aa7.12□□□□□ -1.27
PDPN-210ENST00000513143 C1orf195Q5TG92 126 aa7.09□□□□□ -1.27
PDPN-210ENST00000513143 RETNLBQ9BQ08 111 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms