RNA–Protein interactions for RNA: ENST00000512531.1

MSH3-203, Transcript of mutS homolog 3, humanhuman

TSL 5

Gene MSH3, Length 531 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3-203ENST00000512531 FAM236BA0A1B0GV22 79 aa6.11□□□□□ -1.43
MSH3-203ENST00000512531 KRTAP4-12Q9BQ66 201 aa6.11□□□□□ -1.43
MSH3-203ENST00000512531 LINC00846Q9NV44 126 aa6.11□□□□□ -1.43
MSH3-203ENST00000512531 DNAH5Q8TE73 4624 aa6.1□□□□□ -1.43
MSH3-203ENST00000512531 REG3GQ6UW15 175 aa6.1□□□□□ -1.43
MSH3-203ENST00000512531 Q6ZRX8 168 aa6.1□□□□□ -1.43
MSH3-203ENST00000512531 SMCR5Q8TEV8 140 aa6.1□□□□□ -1.43
MSH3-203ENST00000512531 F8WEM9 126 aa6.09□□□□□ -1.43
MSH3-203ENST00000512531 FUSP35637 526 aaKnown RBP eCLIP6.09□□□□□ -1.43
MSH3-203ENST00000512531 FAM19A5Q7Z5A7 132 aaPredicted RBP6.09□□□□□ -1.43
MSH3-203ENST00000512531 APOBP04114 4563 aaKnown RBP6.08□□□□□ -1.44
MSH3-203ENST00000512531 TRBV7-4A0A0J9YYF1 115 aa6.08□□□□□ -1.44
MSH3-203ENST00000512531 SPRR1AP35321 89 aa6.08□□□□□ -1.44
MSH3-203ENST00000512531 HIST1H4AP62805 103 aaKnown RBP6.08□□□□□ -1.44
MSH3-203ENST00000512531 UBE2BP63146 152 aa6.08□□□□□ -1.44
MSH3-203ENST00000512531 IGKV3D-7A0A0C4DH55 119 aa6.07□□□□□ -1.44
MSH3-203ENST00000512531 CXCL6P80162 114 aa6.07□□□□□ -1.44
MSH3-203ENST00000512531 Q75L30 129 aa6.07□□□□□ -1.44
MSH3-203ENST00000512531 SMIM20Q8N5G0 67 aa6.07□□□□□ -1.44
MSH3-203ENST00000512531 RPL37AP8A6NKH3 93 aa6.06□□□□□ -1.44
MSH3-203ENST00000512531 BCE1O60756 84 aa6.06□□□□□ -1.44
MSH3-203ENST00000512531 KRTAP19-1Q8IUB9 90 aa6.06□□□□□ -1.44
MSH3-203ENST00000512531 HERC1Q15751 4861 aa6.06□□□□□ -1.44
MSH3-203ENST00000512531 UQCRQO14949 82 aa6.05□□□□□ -1.44
MSH3-203ENST00000512531 DEFB105AQ8NG35 78 aa6.05□□□□□ -1.44
MSH3-203ENST00000512531 DMBT1Q9UGM3 2413 aaPredicted RBP6.05□□□□□ -1.44
MSH3-203ENST00000512531 IGKV2-24A0A0C4DH68 120 aa6.04□□□□□ -1.44
MSH3-203ENST00000512531 HAMPP81172 84 aa6.04□□□□□ -1.44
MSH3-203ENST00000512531 IGLV5-48A0A075B6I7 105 aa6.03□□□□□ -1.44
MSH3-203ENST00000512531 NREPQ16612 68 aa6.03□□□□□ -1.44
MSH3-203ENST00000512531 Q6ZVQ6 151 aa6.03□□□□□ -1.44
MSH3-203ENST00000512531 C9orf163Q8N9P6 203 aa6.03□□□□□ -1.44
MSH3-203ENST00000512531 DPH3Q96FX2 82 aa6.03□□□□□ -1.44
MSH3-203ENST00000512531 KRTAP9-9Q9BYP9 154 aa6.03□□□□□ -1.44
MSH3-203ENST00000512531 KRTAP9-4Q9BYQ2 154 aa6.03□□□□□ -1.44
MSH3-203ENST00000512531 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.02□□□□□ -1.45
MSH3-203ENST00000512531 A0A096LNI7 61 aa6.02□□□□□ -1.45
MSH3-203ENST00000512531 FAM168BA1KXE4 195 aa6.02□□□□□ -1.45
MSH3-203ENST00000512531 KRTAP4-16G5E9R7 235 aaPredicted RBP6.02□□□□□ -1.45
MSH3-203ENST00000512531 FAM19A1Q7Z5A9 133 aa6.02□□□□□ -1.45
MSH3-203ENST00000512531 C3orf22Q8N5N4 141 aa6.02□□□□□ -1.45
MSH3-203ENST00000512531 KRTAP9-7A8MTY7 169 aa6.01□□□□□ -1.45
MSH3-203ENST00000512531 EPM2AB3EWF7 344 aa6.01□□□□□ -1.45
MSH3-203ENST00000512531 H0Y9J4 135 aa6.01□□□□□ -1.45
MSH3-203ENST00000512531 COX7CP15954 63 aa6.01□□□□□ -1.45
MSH3-203ENST00000512531 C9orf153Q5TBE3 101 aa6.01□□□□□ -1.45
MSH3-203ENST00000512531 Q8N377 158 aa6.01□□□□□ -1.45
MSH3-203ENST00000512531 VPS13BQ7Z7G8 4022 aa6□□□□□ -1.45
MSH3-203ENST00000512531 KRTAP4-8A0A0G2JLE6 195 aa6□□□□□ -1.45
MSH3-203ENST00000512531 UBE2AP49459 152 aa6□□□□□ -1.45
MSH3-203ENST00000512531 LINC01547P58512 204 aaPredicted RBP6□□□□□ -1.45
MSH3-203ENST00000512531 SEC61BP60468 96 aaKnown RBP6□□□□□ -1.45
MSH3-203ENST00000512531 SERP2Q8N6R1 65 aa6□□□□□ -1.45
MSH3-203ENST00000512531 KRTAP1-5Q9BYS1 174 aa6□□□□□ -1.45
MSH3-203ENST00000512531 C1orf137Q5JT78 98 aa5.99□□□□□ -1.45
MSH3-203ENST00000512531 BPY2O14599 106 aa5.98□□□□□ -1.45
MSH3-203ENST00000512531 Q6ZRN7 208 aaPredicted RBP5.98□□□□□ -1.45
MSH3-203ENST00000512531 Q9BRP9 147 aa5.98□□□□□ -1.45
MSH3-203ENST00000512531 LRCOL1A6NCL2 159 aa5.97□□□□□ -1.45
MSH3-203ENST00000512531 LCE4AQ5TA78 99 aa5.97□□□□□ -1.45
MSH3-203ENST00000512531 Q8NBF4 154 aa5.97□□□□□ -1.45
MSH3-203ENST00000512531 CCDC179H3BU77 68 aa5.96□□□□□ -1.46
MSH3-203ENST00000512531 HIGD2AQ9BW72 106 aa5.96□□□□□ -1.46
MSH3-203ENST00000512531 ZNF706Q9Y5V0 76 aaPredicted RBP5.96□□□□□ -1.46
MSH3-203ENST00000512531 A0A087WTM6 91 aa5.95□□□□□ -1.46
MSH3-203ENST00000512531 A0A1W2PNN7 141 aa5.95□□□□□ -1.46
MSH3-203ENST00000512531 TRAV7A0A075B6U4 112 aa5.94□□□□□ -1.46
MSH3-203ENST00000512531 A0A087WVE0 104 aa5.94□□□□□ -1.46
MSH3-203ENST00000512531 CRYGAP11844 174 aa5.94□□□□□ -1.46
MSH3-203ENST00000512531 KRTAP7-1Q8IUC3 87 aa5.94□□□□□ -1.46
MSH3-203ENST00000512531 FAT1Q14517 4588 aa5.93□□□□□ -1.46
MSH3-203ENST00000512531 Q5VSD8 79 aa5.93□□□□□ -1.46
MSH3-203ENST00000512531 SPRR4Q96PI1 79 aa5.93□□□□□ -1.46
MSH3-203ENST00000512531 MYCBP2O75592 4640 aa5.93□□□□□ -1.46
MSH3-203ENST00000512531 FLG2Q5D862 2391 aaPredicted RBP5.92□□□□□ -1.46
MSH3-203ENST00000512531 IGLV8-61A0A075B6I0 122 aa5.92□□□□□ -1.46
MSH3-203ENST00000512531 PRLHP81277 87 aa5.92□□□□□ -1.46
MSH3-203ENST00000512531 PHF5AQ7RTV0 110 aaKnown RBP5.92□□□□□ -1.46
MSH3-203ENST00000512531 ST20-AS1Q8NBB2 130 aa5.92□□□□□ -1.46
MSH3-203ENST00000512531 IGLV5-52A0A0A0MRZ9 124 aa5.91□□□□□ -1.46
MSH3-203ENST00000512531 SPRR1BP22528 89 aa5.91□□□□□ -1.46
MSH3-203ENST00000512531 RPL37AP61513 92 aaKnown RBP5.91□□□□□ -1.46
MSH3-203ENST00000512531 SPACA4Q8TDM5 124 aa5.91□□□□□ -1.46
MSH3-203ENST00000512531 SRRM2Q9UQ35 2752 aaKnown RBP5.9□□□□□ -1.46
MSH3-203ENST00000512531 ERC2-IT1O76042 136 aa5.9□□□□□ -1.46
MSH3-203ENST00000512531 CHTF8P0CG12 524 aa5.9□□□□□ -1.46
MSH3-203ENST00000512531 PRR26Q8N8Z3 221 aa5.9□□□□□ -1.46
MSH3-203ENST00000512531 MPLKIPQ8TAP9 179 aa5.9□□□□□ -1.46
MSH3-203ENST00000512531 NDUFC1O43677 76 aa5.89□□□□□ -1.47
MSH3-203ENST00000512531 KRTAP10-1P60331 282 aa5.89□□□□□ -1.47
MSH3-203ENST00000512531 TMEM258P61165 79 aa5.89□□□□□ -1.47
MSH3-203ENST00000512531 KRTAP15-1Q3LI76 137 aa5.88□□□□□ -1.47
MSH3-203ENST00000512531 A0A1W2PNM2 257 aa5.87□□□□□ -1.47
MSH3-203ENST00000512531 SCXQ7RTU7 201 aa5.87□□□□□ -1.47
MSH3-203ENST00000512531 SMIM29Q86T20 159 aa5.87□□□□□ -1.47
MSH3-203ENST00000512531 J3KT08 172 aa5.86□□□□□ -1.47
MSH3-203ENST00000512531 IGFL1Q6UW32 110 aa5.86□□□□□ -1.47
MSH3-203ENST00000512531 SS18L2Q9UHA2 77 aa5.86□□□□□ -1.47
MSH3-203ENST00000512531 PLAC8Q9NZF1 115 aa5.85□□□□□ -1.47
MSH3-203ENST00000512531 KRTAP29-1A8MX34 341 aaPredicted RBP5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms