RNA–Protein interactions for RNA: ENST00000512234.1

SQSTM1-214, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 1,722 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-214ENST00000512234 SCGB1A1P11684 91 aa8.94□□□□□ -0.98
SQSTM1-214ENST00000512234 DHRS4-AS1Q9P1J3 65 aa8.94□□□□□ -0.98
SQSTM1-214ENST00000512234 TRBV7-6A0A0J9YX20 115 aa8.93□□□□□ -0.98
SQSTM1-214ENST00000512234 MOBPQ13875 183 aa8.92□□□□□ -0.98
SQSTM1-214ENST00000512234 ETDBQ3ZM63 59 aa8.91□□□□□ -0.98
SQSTM1-214ENST00000512234 Q8NBF4 154 aa8.91□□□□□ -0.98
SQSTM1-214ENST00000512234 Q1RN00 199 aa8.9□□□□□ -0.98
SQSTM1-214ENST00000512234 LINC00304Q8N9R0 145 aa8.9□□□□□ -0.98
SQSTM1-214ENST00000512234 LINC01547P58512 204 aaPredicted RBP8.89□□□□□ -0.99
SQSTM1-214ENST00000512234 LINC00575Q6W349 94 aa8.89□□□□□ -0.99
SQSTM1-214ENST00000512234 PSMB2P49721 201 aa8.88□□□□□ -0.99
SQSTM1-214ENST00000512234 C9orf153Q5TBE3 101 aa8.88□□□□□ -0.99
SQSTM1-214ENST00000512234 TEN1Q86WV5 123 aa8.88□□□□□ -0.99
SQSTM1-214ENST00000512234 TCL1BO95988 128 aa8.87□□□□□ -0.99
SQSTM1-214ENST00000512234 SMCPP49901 116 aaPredicted RBP8.87□□□□□ -0.99
SQSTM1-214ENST00000512234 FAM218AQ96MZ4 157 aa8.87□□□□□ -0.99
SQSTM1-214ENST00000512234 RETNLBQ9BQ08 111 aa8.87□□□□□ -0.99
SQSTM1-214ENST00000512234 PPDPFLQ8WWR9 84 aa8.86□□□□□ -0.99
SQSTM1-214ENST00000512234 SIGMAR1Q99720 223 aa8.86□□□□□ -0.99
SQSTM1-214ENST00000512234 LPAP08519 4548 aa8.86□□□□□ -0.99
SQSTM1-214ENST00000512234 A0A0G2JQZ4 141 aa8.85□□□□□ -0.99
SQSTM1-214ENST00000512234 hADV29S1A0JD25 119 aa8.85□□□□□ -0.99
SQSTM1-214ENST00000512234 SPRR1BP22528 89 aa8.85□□□□□ -0.99
SQSTM1-214ENST00000512234 LRP2P98164 4655 aa8.85□□□□□ -0.99
SQSTM1-214ENST00000512234 SCGB1C2P0DMR2 95 aa8.85□□□□□ -0.99
SQSTM1-214ENST00000512234 Q6ZQY7 126 aa8.85□□□□□ -0.99
SQSTM1-214ENST00000512234 SMIM29Q86T20 159 aa8.85□□□□□ -0.99
SQSTM1-214ENST00000512234 Q8N377 158 aa8.85□□□□□ -0.99
SQSTM1-214ENST00000512234 TRIAP1O43715 76 aa8.84□□□□□ -0.99
SQSTM1-214ENST00000512234 SLC25A20O43772 301 aa8.84□□□□□ -0.99
SQSTM1-214ENST00000512234 ATXN8Q156A1 80 aa8.84□□□□□ -0.99
SQSTM1-214ENST00000512234 TEX49A0A1B0GTD5 131 aa8.83□□□□□ -1
SQSTM1-214ENST00000512234 A0A1B0GV72 72 aa8.83□□□□□ -1
SQSTM1-214ENST00000512234 IGLV5-48A0A075B6I7 105 aa8.83□□□□□ -1
SQSTM1-214ENST00000512234 COX6CP09669 75 aa8.82□□□□□ -1
SQSTM1-214ENST00000512234 PRR4Q16378 134 aa8.82□□□□□ -1
SQSTM1-214ENST00000512234 HRCT1Q6UXD1 115 aa8.82□□□□□ -1
SQSTM1-214ENST00000512234 UBR4Q5T4S7 5183 aa8.81□□□□□ -1
SQSTM1-214ENST00000512234 CLEC2BQ92478 149 aa8.81□□□□□ -1
SQSTM1-214ENST00000512234 LAMTOR3Q9UHA4 124 aa8.81□□□□□ -1
SQSTM1-214ENST00000512234 C4orf48Q5BLP8 95 aa8.79□□□□□ -1
SQSTM1-214ENST00000512234 SSBP3-AS1Q7Z2R9 100 aa8.79□□□□□ -1
SQSTM1-214ENST00000512234 MTURNQ8N3F0 131 aa8.79□□□□□ -1
SQSTM1-214ENST00000512234 ANKRD29Q8N6D5 301 aa8.78□□□□□ -1
SQSTM1-214ENST00000512234 H3BT86 120 aa8.77□□□□□ -1
SQSTM1-214ENST00000512234 C9JAW5 83 aa8.77□□□□□ -1.01
SQSTM1-214ENST00000512234 H0YGX0 51 aa8.77□□□□□ -1.01
SQSTM1-214ENST00000512234 CDIP1Q9H305 208 aa8.75□□□□□ -1.01
SQSTM1-214ENST00000512234 LST1O00453 97 aa8.74□□□□□ -1.01
SQSTM1-214ENST00000512234 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.74□□□□□ -1.01
SQSTM1-214ENST00000512234 SPAG11AQ6PDA7 123 aa8.74□□□□□ -1.01
SQSTM1-214ENST00000512234 SPINK1P00995 79 aa8.72□□□□□ -1.01
SQSTM1-214ENST00000512234 FAM240AA0A1B0GVK7 77 aa8.69□□□□□ -1.02
SQSTM1-214ENST00000512234 F8WEM9 126 aa8.68□□□□□ -1.02
SQSTM1-214ENST00000512234 TRACP01848 142 aa8.67□□□□□ -1.02
SQSTM1-214ENST00000512234 IGFL1Q6UW32 110 aa8.66□□□□□ -1.02
SQSTM1-214ENST00000512234 IGLV7-46A0A075B6I9 117 aa8.66□□□□□ -1.02
SQSTM1-214ENST00000512234 SNCGO76070 127 aa8.66□□□□□ -1.02
SQSTM1-214ENST00000512234 A0A1B0GX51 115 aa8.64□□□□□ -1.03
SQSTM1-214ENST00000512234 NDUFV3P56181 108 aaKnown RBP8.64□□□□□ -1.03
SQSTM1-214ENST00000512234 Q6Q795 121 aa8.63□□□□□ -1.03
SQSTM1-214ENST00000512234 DNAL4O96015 105 aa8.63□□□□□ -1.03
SQSTM1-214ENST00000512234 MT-ATP8P03928 68 aa8.63□□□□□ -1.03
SQSTM1-214ENST00000512234 ACYP1P07311 99 aa8.63□□□□□ -1.03
SQSTM1-214ENST00000512234 RNF213Q63HN8 5207 aa8.62□□□□□ -1.03
SQSTM1-214ENST00000512234 IGLV8-61A0A075B6I0 122 aa8.62□□□□□ -1.03
SQSTM1-214ENST00000512234 ORMDL1Q9P0S3 153 aa8.61□□□□□ -1.03
SQSTM1-214ENST00000512234 RPS29P62273 56 aaKnown RBP8.6□□□□□ -1.03
SQSTM1-214ENST00000512234 CD164Q04900 197 aa8.59□□□□□ -1.03
SQSTM1-214ENST00000512234 Q6JHZ5 121 aa8.57□□□□□ -1.04
SQSTM1-214ENST00000512234 LIMD2Q9BT23 127 aa8.57□□□□□ -1.04
SQSTM1-214ENST00000512234 C1orf195Q5TG92 126 aa8.54□□□□□ -1.04
SQSTM1-214ENST00000512234 FP248Q71RG6 208 aaPredicted RBP8.54□□□□□ -1.04
SQSTM1-214ENST00000512234 TRBV7-7A0A0K0K1E9 115 aa8.54□□□□□ -1.04
SQSTM1-214ENST00000512234 BAALC-AS2P0C853 105 aa8.54□□□□□ -1.04
SQSTM1-214ENST00000512234 KRTAP13-3Q3SY46 172 aa8.54□□□□□ -1.04
SQSTM1-214ENST00000512234 TMEM256-PLSCR3K7ERE1 68 aa8.53□□□□□ -1.04
SQSTM1-214ENST00000512234 TPRXLQ17RH7 258 aa8.53□□□□□ -1.04
SQSTM1-214ENST00000512234 IMUPQ9GZP8 106 aa8.53□□□□□ -1.04
SQSTM1-214ENST00000512234 A0A1W2PNM2 257 aa8.51□□□□□ -1.05
SQSTM1-214ENST00000512234 GHRHP01286 108 aa8.5□□□□□ -1.05
SQSTM1-214ENST00000512234 Q5XG85 94 aa8.5□□□□□ -1.05
SQSTM1-214ENST00000512234 C9orf92A6NGG3 77 aa8.49□□□□□ -1.05
SQSTM1-214ENST00000512234 ANAPC13Q9BS18 74 aa8.49□□□□□ -1.05
SQSTM1-214ENST00000512234 A0A087WSZ3 146 aa8.48□□□□□ -1.05
SQSTM1-214ENST00000512234 LINC00643Q86TS7 51 aa8.48□□□□□ -1.05
SQSTM1-214ENST00000512234 OBSCN-AS1Q96MR7 158 aa8.48□□□□□ -1.05
SQSTM1-214ENST00000512234 MUC2Q02817 5179 aa8.47□□□□□ -1.05
SQSTM1-214ENST00000512234 H3BQ85 93 aa8.45□□□□□ -1.06
SQSTM1-214ENST00000512234 CCKP06307 115 aa8.43□□□□□ -1.06
SQSTM1-214ENST00000512234 RBM3P98179 157 aaKnown RBP8.43□□□□□ -1.06
SQSTM1-214ENST00000512234 TRBV7-4A0A0J9YYF1 115 aa8.42□□□□□ -1.06
SQSTM1-214ENST00000512234 SS18L2Q9UHA2 77 aa8.42□□□□□ -1.06
SQSTM1-214ENST00000512234 XP32Q5T750 250 aa8.41□□□□□ -1.06
SQSTM1-214ENST00000512234 MUC17Q685J3 4493 aa8.4□□□□□ -1.06
SQSTM1-214ENST00000512234 JMJD7-PLA2G4BH0Y9G9 81 aa8.4□□□□□ -1.07
SQSTM1-214ENST00000512234 ASB16-AS1Q495Z4 193 aa8.4□□□□□ -1.07
SQSTM1-214ENST00000512234 DEFB116Q30KQ4 102 aa8.39□□□□□ -1.07
SQSTM1-214ENST00000512234 Q96NJ1 140 aa8.39□□□□□ -1.07
SQSTM1-214ENST00000512234 DSCR8Q96T75 97 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms