RNA–Protein interactions for RNA: ENST00000512027.1

DDX41-213, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-213ENST00000512027 KRTAP4-1Q9BYQ7 146 aa9.08□□□□□ -0.96
DDX41-213ENST00000512027 C9orf92A6NGG3 77 aa9.07□□□□□ -0.96
DDX41-213ENST00000512027 RAB37Q96AX2 223 aa9.07□□□□□ -0.96
DDX41-213ENST00000512027 F8WEM9 126 aa9.06□□□□□ -0.96
DDX41-213ENST00000512027 BVES-AS1Q5T3Y7 98 aa9.06□□□□□ -0.96
DDX41-213ENST00000512027 TMA7Q9Y2S6 64 aaKnown RBP9.05□□□□□ -0.96
DDX41-213ENST00000512027 PYY3Q5JQD4 70 aa9.04□□□□□ -0.96
DDX41-213ENST00000512027 A0A0B4J2C4 111 aa9.03□□□□□ -0.96
DDX41-213ENST00000512027 SEC61BP60468 96 aaKnown RBP9.03□□□□□ -0.96
DDX41-213ENST00000512027 C1orf195Q5TG92 126 aa9.03□□□□□ -0.96
DDX41-213ENST00000512027 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.03□□□□□ -0.96
DDX41-213ENST00000512027 CEND1Q8N111 149 aa9.03□□□□□ -0.96
DDX41-213ENST00000512027 FXYD2P54710 66 aa9.02□□□□□ -0.97
DDX41-213ENST00000512027 Q5XG85 94 aa9.02□□□□□ -0.97
DDX41-213ENST00000512027 FAM218AQ96MZ4 157 aa9.02□□□□□ -0.97
DDX41-213ENST00000512027 LCE2AQ5TA79 106 aaPredicted RBP9.01□□□□□ -0.97
DDX41-213ENST00000512027 IGFL1Q6UW32 110 aa9.01□□□□□ -0.97
DDX41-213ENST00000512027 IGLV8-61A0A075B6I0 122 aa8.99□□□□□ -0.97
DDX41-213ENST00000512027 H3BUT2 72 aa8.98□□□□□ -0.97
DDX41-213ENST00000512027 OCIAD2Q56VL3 154 aa8.98□□□□□ -0.97
DDX41-213ENST00000512027 CLEC2BQ92478 149 aa8.98□□□□□ -0.97
DDX41-213ENST00000512027 Q6JHZ5 121 aa8.97□□□□□ -0.97
DDX41-213ENST00000512027 SNHG12Q9BXW3 62 aa8.97□□□□□ -0.97
DDX41-213ENST00000512027 PRO1854Q9UHT4 67 aa8.96□□□□□ -0.98
DDX41-213ENST00000512027 TMEM238LA0A1B0GVL6 79 aa8.95□□□□□ -0.98
DDX41-213ENST00000512027 A6NJY4 79 aa8.95□□□□□ -0.98
DDX41-213ENST00000512027 TCL1BO95988 128 aa8.95□□□□□ -0.98
DDX41-213ENST00000512027 PPDPFLQ8WWR9 84 aa8.95□□□□□ -0.98
DDX41-213ENST00000512027 TRBV7-7A0A0K0K1E9 115 aa8.94□□□□□ -0.98
DDX41-213ENST00000512027 H0YGX0 51 aa8.94□□□□□ -0.98
DDX41-213ENST00000512027 K7ERJ3 54 aa8.93□□□□□ -0.98
DDX41-213ENST00000512027 TRIAP1O43715 76 aa8.93□□□□□ -0.98
DDX41-213ENST00000512027 PCOTHQ58A44 107 aa8.93□□□□□ -0.98
DDX41-213ENST00000512027 HSD52Q0P140 79 aa8.92□□□□□ -0.98
DDX41-213ENST00000512027 NDUFV3P56181 108 aaKnown RBP8.89□□□□□ -0.99
DDX41-213ENST00000512027 SNCGO76070 127 aa8.88□□□□□ -0.99
DDX41-213ENST00000512027 UQCR10Q9UDW1 63 aa8.87□□□□□ -0.99
DDX41-213ENST00000512027 FABP2P12104 132 aa8.86□□□□□ -0.99
DDX41-213ENST00000512027 A0A1B0GX51 115 aa8.85□□□□□ -0.99
DDX41-213ENST00000512027 PSMB2P49721 201 aa8.84□□□□□ -0.99
DDX41-213ENST00000512027 A0A1B0GV72 72 aa8.83□□□□□ -1
DDX41-213ENST00000512027 H3BMG7 143 aa8.83□□□□□ -1
DDX41-213ENST00000512027 RPL37P61927 97 aaKnown RBP8.83□□□□□ -1
DDX41-213ENST00000512027 LST1O00453 97 aa8.81□□□□□ -1
DDX41-213ENST00000512027 LCE2CQ5TA81 110 aa8.8□□□□□ -1
DDX41-213ENST00000512027 Q6Q795 121 aa8.8□□□□□ -1
DDX41-213ENST00000512027 TEN1Q86WV5 123 aa8.8□□□□□ -1
DDX41-213ENST00000512027 A0A087WSZ3 146 aa8.79□□□□□ -1
DDX41-213ENST00000512027 KRTAP19-2Q3LHN2 52 aa8.79□□□□□ -1
DDX41-213ENST00000512027 OBSCN-AS1Q96MR7 158 aa8.79□□□□□ -1
DDX41-213ENST00000512027 DNAL4O96015 105 aa8.78□□□□□ -1
DDX41-213ENST00000512027 ORMDL1Q9P0S3 153 aa8.78□□□□□ -1
DDX41-213ENST00000512027 A0A1W2PNM2 257 aa8.77□□□□□ -1.01
DDX41-213ENST00000512027 SS18L2Q9UHA2 77 aa8.77□□□□□ -1.01
DDX41-213ENST00000512027 GHRHP01286 108 aa8.76□□□□□ -1.01
DDX41-213ENST00000512027 COX6CP09669 75 aa8.75□□□□□ -1.01
DDX41-213ENST00000512027 KRTAP9-2Q9BYQ4 174 aa8.75□□□□□ -1.01
DDX41-213ENST00000512027 Q96NJ1 140 aa8.74□□□□□ -1.01
DDX41-213ENST00000512027 ANKRD29Q8N6D5 301 aa8.71□□□□□ -1.02
DDX41-213ENST00000512027 SCGB1C2P0DMR2 95 aa8.7□□□□□ -1.02
DDX41-213ENST00000512027 TMEM256-PLSCR3K7ERE1 68 aa8.69□□□□□ -1.02
DDX41-213ENST00000512027 TRACP01848 142 aa8.68□□□□□ -1.02
DDX41-213ENST00000512027 NAA38Q9BRA0 125 aaKnown RBP8.68□□□□□ -1.02
DDX41-213ENST00000512027 MT1HP80294 61 aa8.67□□□□□ -1.02
DDX41-213ENST00000512027 Q75L30 129 aa8.67□□□□□ -1.02
DDX41-213ENST00000512027 SIGMAR1Q99720 223 aa8.67□□□□□ -1.02
DDX41-213ENST00000512027 H3BQ85 93 aa8.66□□□□□ -1.02
DDX41-213ENST00000512027 DSCR10P59022 87 aa8.66□□□□□ -1.02
DDX41-213ENST00000512027 TRBV7-4A0A0J9YYF1 115 aa8.65□□□□□ -1.02
DDX41-213ENST00000512027 CCKP06307 115 aa8.65□□□□□ -1.02
DDX41-213ENST00000512027 UBE2V1Q13404 147 aa8.65□□□□□ -1.02
DDX41-213ENST00000512027 DEFB116Q30KQ4 102 aa8.64□□□□□ -1.03
DDX41-213ENST00000512027 ATP11AUNQ6ZP68 121 aa8.64□□□□□ -1.03
DDX41-213ENST00000512027 SMIM6P0DI80 62 aa8.63□□□□□ -1.03
DDX41-213ENST00000512027 VPS25Q9BRG1 176 aa8.62□□□□□ -1.03
DDX41-213ENST00000512027 M0R143 59 aa8.61□□□□□ -1.03
DDX41-213ENST00000512027 IGKV4-1P06312 121 aa8.61□□□□□ -1.03
DDX41-213ENST00000512027 C20orf166-AS1Q96NR2 134 aa8.61□□□□□ -1.03
DDX41-213ENST00000512027 BAALC-AS2P0C853 105 aa8.6□□□□□ -1.03
DDX41-213ENST00000512027 FLGP20930 4061 aaPredicted RBP8.59□□□□□ -1.03
DDX41-213ENST00000512027 A8MUU9 505 aa8.59□□□□□ -1.03
DDX41-213ENST00000512027 COX6B2Q6YFQ2 88 aa8.59□□□□□ -1.03
DDX41-213ENST00000512027 RBM3P98179 157 aaKnown RBP8.58□□□□□ -1.04
DDX41-213ENST00000512027 LINC00472Q9H8W2 130 aa8.58□□□□□ -1.04
DDX41-213ENST00000512027 NOTCH2NLQ7Z3S9 236 aa8.57□□□□□ -1.04
DDX41-213ENST00000512027 KRTAP16-1A8MUX0 517 aa8.55□□□□□ -1.04
DDX41-213ENST00000512027 DSCR8Q96T75 97 aa8.55□□□□□ -1.04
DDX41-213ENST00000512027 LINC00313P59037 77 aa8.54□□□□□ -1.04
DDX41-213ENST00000512027 ATXN8Q156A1 80 aa8.54□□□□□ -1.04
DDX41-213ENST00000512027 BATFQ16520 125 aa8.54□□□□□ -1.04
DDX41-213ENST00000512027 IGHV6-1A0A0B4J1U7 121 aa8.52□□□□□ -1.05
DDX41-213ENST00000512027 LOC105371267A0A1B0GV96 52 aa8.52□□□□□ -1.05
DDX41-213ENST00000512027 C9JAW5 83 aa8.51□□□□□ -1.05
DDX41-213ENST00000512027 TSTD3H0UI37 97 aa8.51□□□□□ -1.05
DDX41-213ENST00000512027 M0R2T5 61 aa8.5□□□□□ -1.05
DDX41-213ENST00000512027 KRTAP10-6P60371 365 aaPredicted RBP8.49□□□□□ -1.05
DDX41-213ENST00000512027 LORP23490 312 aaPredicted RBP8.48□□□□□ -1.05
DDX41-213ENST00000512027 LCE2DQ5TA82 110 aaPredicted RBP8.47□□□□□ -1.05
DDX41-213ENST00000512027 Q6ZQT0 140 aa8.47□□□□□ -1.05
DDX41-213ENST00000512027 A0A1B0GVX0 72 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms