RNA–Protein interactions for RNA: ENST00000511817.1

XRCC4-205, Transcript of X-ray repair cross complementing 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene XRCC4, Length 1,636 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-205ENST00000511817 Q6ZQY7 126 aa1.3□□□□□ -2.2
XRCC4-205ENST00000511817 C1orf64Q8NEQ6 169 aa1.3□□□□□ -2.2
XRCC4-205ENST00000511817 SNURFQ9Y675 71 aa1.3□□□□□ -2.2
XRCC4-205ENST00000511817 SPTBN4Q9H254 2564 aa1.3□□□□□ -2.2
XRCC4-205ENST00000511817 SVEP1Q4LDE5 3571 aa1.3□□□□□ -2.2
XRCC4-205ENST00000511817 CHD6Q8TD26 2715 aa1.3□□□□□ -2.2
XRCC4-205ENST00000511817 NCOR2Q9Y618 2525 aa1.3□□□□□ -2.2
XRCC4-205ENST00000511817 SPG11Q96JI7 2443 aa1.3□□□□□ -2.2
XRCC4-205ENST00000511817 GVQW2A0A096LPI5 108 aaPredicted RBP1.29□□□□□ -2.2
XRCC4-205ENST00000511817 F8WEM9 126 aa1.29□□□□□ -2.2
XRCC4-205ENST00000511817 H3BPC8 53 aa1.29□□□□□ -2.2
XRCC4-205ENST00000511817 H7BZZ5 65 aa1.29□□□□□ -2.2
XRCC4-205ENST00000511817 HTN3P15516 51 aa1.29□□□□□ -2.2
XRCC4-205ENST00000511817 FUSP35637 526 aaKnown RBP eCLIP1.29□□□□□ -2.2
XRCC4-205ENST00000511817 ELOF1P60002 83 aaKnown RBP1.29□□□□□ -2.2
XRCC4-205ENST00000511817 KLKP1Q107X0 134 aa1.29□□□□□ -2.2
XRCC4-205ENST00000511817 DEFB135Q30KP9 77 aa1.29□□□□□ -2.2
XRCC4-205ENST00000511817 LELP1Q5T871 98 aa1.29□□□□□ -2.2
XRCC4-205ENST00000511817 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.29□□□□□ -2.2
XRCC4-205ENST00000511817 RETNLBQ9BQ08 111 aa1.29□□□□□ -2.2
XRCC4-205ENST00000511817 C6orf48Q9UBA6 75 aa1.29□□□□□ -2.2
XRCC4-205ENST00000511817 KLK12Q9UKR0 248 aa1.29□□□□□ -2.2
XRCC4-205ENST00000511817 CHD8Q9HCK8 2581 aa1.29□□□□□ -2.2
XRCC4-205ENST00000511817 PKD1L2Q7Z442 2459 aa1.29□□□□□ -2.2
XRCC4-205ENST00000511817 CELSR2Q9HCU4 2923 aa1.29□□□□□ -2.2
XRCC4-205ENST00000511817 MXRA5Q9NR99 2828 aa1.29□□□□□ -2.2
XRCC4-205ENST00000511817 TEX15Q9BXT5 2789 aa1.29□□□□□ -2.2
XRCC4-205ENST00000511817 USP9XQ93008 2570 aaPredicted RBP1.29□□□□□ -2.2
XRCC4-205ENST00000511817 MAP1AP78559 2803 aaPredicted RBP1.29□□□□□ -2.2
XRCC4-205ENST00000511817 FLNCQ14315 2725 aa1.29□□□□□ -2.2
XRCC4-205ENST00000511817 COL12A1Q99715 3063 aa1.29□□□□□ -2.2
XRCC4-205ENST00000511817 IGSF10Q6WRI0 2623 aa1.29□□□□□ -2.2
XRCC4-205ENST00000511817 TRBV7-4A0A0J9YYF1 115 aa1.29□□□□□ -2.2
XRCC4-205ENST00000511817 NDUFC1O43677 76 aa1.29□□□□□ -2.2
XRCC4-205ENST00000511817 SPART-AS1P0CW21 52 aa1.29□□□□□ -2.2
XRCC4-205ENST00000511817 MIFP14174 115 aa1.29□□□□□ -2.2
XRCC4-205ENST00000511817 ATP5EP56381 51 aaPredicted RBP1.29□□□□□ -2.2
XRCC4-205ENST00000511817 KRTAP10-10P60014 251 aa1.29□□□□□ -2.2
XRCC4-205ENST00000511817 NREPQ16612 68 aa1.29□□□□□ -2.2
XRCC4-205ENST00000511817 ST20-AS1Q8NBB2 130 aa1.29□□□□□ -2.2
XRCC4-205ENST00000511817 PTPN13Q12923 2485 aa1.29□□□□□ -2.2
XRCC4-205ENST00000511817 LRRK2Q5S007 2527 aa1.28□□□□□ -2.2
XRCC4-205ENST00000511817 ITPR3Q14573 2671 aa1.28□□□□□ -2.2
XRCC4-205ENST00000511817 POLQO75417 2590 aa1.28□□□□□ -2.2
XRCC4-205ENST00000511817 ZANQ9Y493 2812 aa1.28□□□□□ -2.2
XRCC4-205ENST00000511817 VPS13CQ709C8 3753 aa1.28□□□□□ -2.2
XRCC4-205ENST00000511817 TLN2Q9Y4G6 2542 aa1.28□□□□□ -2.2
XRCC4-205ENST00000511817 FBN2P35556 2912 aa1.28□□□□□ -2.2
XRCC4-205ENST00000511817 C16orf90A8MZG2 172 aa1.28□□□□□ -2.2
XRCC4-205ENST00000511817 PANO1I0J062 215 aa1.28□□□□□ -2.2
XRCC4-205ENST00000511817 ERC2-IT1O76042 136 aa1.28□□□□□ -2.2
XRCC4-205ENST00000511817 IGKV4-1P06312 121 aa1.28□□□□□ -2.2
XRCC4-205ENST00000511817 Q8N9L7 120 aa1.28□□□□□ -2.2
XRCC4-205ENST00000511817 Q8NAQ8 132 aa1.28□□□□□ -2.2
XRCC4-205ENST00000511817 DEFB105AQ8NG35 78 aa1.28□□□□□ -2.2
XRCC4-205ENST00000511817 TMEM254Q8TBM7 123 aa1.28□□□□□ -2.2
XRCC4-205ENST00000511817 LINC00474Q9P2X8 69 aa1.28□□□□□ -2.2
XRCC4-205ENST00000511817 CFAP46Q8IYW2 2715 aa1.28□□□□□ -2.2
XRCC4-205ENST00000511817 JMJD1CQ15652 2540 aa1.28□□□□□ -2.21
XRCC4-205ENST00000511817 UBR5O95071 2799 aaPredicted RBP1.27□□□□□ -2.21
XRCC4-205ENST00000511817 MYO9AB2RTY4 2548 aa1.27□□□□□ -2.21
XRCC4-205ENST00000511817 ESRGQ1W209 222 aa1.27□□□□□ -2.21
XRCC4-205ENST00000511817 KRTAP26-1Q6PEX3 210 aa1.27□□□□□ -2.21
XRCC4-205ENST00000511817 FP248Q71RG6 208 aaPredicted RBP1.27□□□□□ -2.21
XRCC4-205ENST00000511817 WFDC10BQ8IUB3 73 aa1.27□□□□□ -2.21
XRCC4-205ENST00000511817 HIGD2AQ9BW72 106 aa1.27□□□□□ -2.21
XRCC4-205ENST00000511817 CREBBPQ92793 2442 aa1.27□□□□□ -2.21
XRCC4-205ENST00000511817 C2CD3Q4AC94 2353 aa1.27□□□□□ -2.21
XRCC4-205ENST00000511817 USP9YO00507 2555 aaPredicted RBP1.27□□□□□ -2.21
XRCC4-205ENST00000511817 EPG5Q9HCE0 2579 aa1.27□□□□□ -2.21
XRCC4-205ENST00000511817 GCN1Q92616 2671 aaKnown RBP1.26□□□□□ -2.21
XRCC4-205ENST00000511817 IGKV2D-24A0A075B6R9 120 aa1.26□□□□□ -2.21
XRCC4-205ENST00000511817 LINC00483Q53H64 154 aa1.26□□□□□ -2.21
XRCC4-205ENST00000511817 KPRPQ5T749 579 aaPredicted RBP1.26□□□□□ -2.21
XRCC4-205ENST00000511817 SMR3AQ99954 134 aa1.26□□□□□ -2.21
XRCC4-205ENST00000511817 KCNQ1DNQ9H478 68 aa1.26□□□□□ -2.21
XRCC4-205ENST00000511817 MYO18BQ8IUG5 2567 aa1.26□□□□□ -2.21
XRCC4-205ENST00000511817 FLNAP21333 2647 aaKnown RBP1.26□□□□□ -2.21
XRCC4-205ENST00000511817 NAV2Q8IVL1 2488 aa1.26□□□□□ -2.21
XRCC4-205ENST00000511817 FCGBPQ9Y6R7 5405 aaPredicted RBP1.26□□□□□ -2.21
XRCC4-205ENST00000511817 ABCA12Q86UK0 2595 aa1.26□□□□□ -2.21
XRCC4-205ENST00000511817 FAM208BQ5VWN6 2430 aa1.26□□□□□ -2.21
XRCC4-205ENST00000511817 CSMD2Q7Z408 3487 aa1.26□□□□□ -2.21
XRCC4-205ENST00000511817 IGLV5-48A0A075B6I7 105 aa1.26□□□□□ -2.21
XRCC4-205ENST00000511817 A0A1B0GU33 70 aa1.26□□□□□ -2.21
XRCC4-205ENST00000511817 A0A1W2PNM2 257 aa1.26□□□□□ -2.21
XRCC4-205ENST00000511817 H3BNG1 76 aa1.26□□□□□ -2.21
XRCC4-205ENST00000511817 ROMO1P60602 79 aa1.26□□□□□ -2.21
XRCC4-205ENST00000511817 SONP18583 2426 aaKnown RBP1.25□□□□□ -2.21
XRCC4-205ENST00000511817 CACNA1AO00555 2505 aa1.25□□□□□ -2.21
XRCC4-205ENST00000511817 AKAP9Q99996 3911 aa1.25□□□□□ -2.21
XRCC4-205ENST00000511817 FN1P02751 2386 aaKnown RBP1.25□□□□□ -2.21
XRCC4-205ENST00000511817 APCP25054 2843 aa1.25□□□□□ -2.21
XRCC4-205ENST00000511817 AHNAKQ09666 5890 aaKnown RBP1.25□□□□□ -2.21
XRCC4-205ENST00000511817 CENPEQ02224 2701 aa1.25□□□□□ -2.21
XRCC4-205ENST00000511817 PIEZO1Q92508 2521 aa1.25□□□□□ -2.21
XRCC4-205ENST00000511817 ZNF462Q96JM2 2506 aa1.25□□□□□ -2.21
XRCC4-205ENST00000511817 LCE6AA0A183 80 aa1.25□□□□□ -2.21
XRCC4-205ENST00000511817 ETDCA0A1B0GVM5 59 aa1.25□□□□□ -2.21
XRCC4-205ENST00000511817 hDV103S1A0JD37 113 aa1.25□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms