RNA–Protein interactions for RNA: ENST00000511023.1

COL12A1-210, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5

Gene COL12A1, Length 571 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-210ENST00000511023 hADV29S1A0JD25 119 aa8.02□□□□□ -1.13
COL12A1-210ENST00000511023 A0A0U1RQV1 116 aa8□□□□□ -1.13
COL12A1-210ENST00000511023 XP32Q5T750 250 aa8□□□□□ -1.13
COL12A1-210ENST00000511023 Q5XG85 94 aa8□□□□□ -1.13
COL12A1-210ENST00000511023 KRTAP4-1Q9BYQ7 146 aa8□□□□□ -1.13
COL12A1-210ENST00000511023 BVES-AS1Q5T3Y7 98 aa7.98□□□□□ -1.13
COL12A1-210ENST00000511023 A0A0B4J2C4 111 aa7.97□□□□□ -1.13
COL12A1-210ENST00000511023 PYY3Q5JQD4 70 aa7.97□□□□□ -1.13
COL12A1-210ENST00000511023 C1orf195Q5TG92 126 aa7.97□□□□□ -1.13
COL12A1-210ENST00000511023 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.97□□□□□ -1.13
COL12A1-210ENST00000511023 RAB37Q96AX2 223 aa7.97□□□□□ -1.13
COL12A1-210ENST00000511023 IGLV8-61A0A075B6I0 122 aa7.96□□□□□ -1.14
COL12A1-210ENST00000511023 SEC61BP60468 96 aaKnown RBP7.96□□□□□ -1.14
COL12A1-210ENST00000511023 LCE2AQ5TA79 106 aaPredicted RBP7.96□□□□□ -1.14
COL12A1-210ENST00000511023 CEND1Q8N111 149 aa7.96□□□□□ -1.14
COL12A1-210ENST00000511023 F8WEM9 126 aa7.95□□□□□ -1.14
COL12A1-210ENST00000511023 C9orf92A6NGG3 77 aa7.94□□□□□ -1.14
COL12A1-210ENST00000511023 FAM218AQ96MZ4 157 aa7.94□□□□□ -1.14
COL12A1-210ENST00000511023 FXYD2P54710 66 aa7.93□□□□□ -1.14
COL12A1-210ENST00000511023 OCIAD2Q56VL3 154 aa7.93□□□□□ -1.14
COL12A1-210ENST00000511023 IGFL1Q6UW32 110 aa7.93□□□□□ -1.14
COL12A1-210ENST00000511023 TMA7Q9Y2S6 64 aaKnown RBP7.92□□□□□ -1.14
COL12A1-210ENST00000511023 Q6JHZ5 121 aa7.91□□□□□ -1.14
COL12A1-210ENST00000511023 PPDPFLQ8WWR9 84 aa7.91□□□□□ -1.14
COL12A1-210ENST00000511023 CLEC2BQ92478 149 aa7.91□□□□□ -1.14
COL12A1-210ENST00000511023 H0YGX0 51 aa7.9□□□□□ -1.14
COL12A1-210ENST00000511023 PRO1854Q9UHT4 67 aa7.9□□□□□ -1.14
COL12A1-210ENST00000511023 H3BUT2 72 aa7.89□□□□□ -1.15
COL12A1-210ENST00000511023 SNHG12Q9BXW3 62 aa7.89□□□□□ -1.15
COL12A1-210ENST00000511023 TRBV7-7A0A0K0K1E9 115 aa7.88□□□□□ -1.15
COL12A1-210ENST00000511023 TMEM238LA0A1B0GVL6 79 aa7.88□□□□□ -1.15
COL12A1-210ENST00000511023 A6NJY4 79 aa7.88□□□□□ -1.15
COL12A1-210ENST00000511023 TCL1BO95988 128 aa7.88□□□□□ -1.15
COL12A1-210ENST00000511023 TRIAP1O43715 76 aa7.86□□□□□ -1.15
COL12A1-210ENST00000511023 HSD52Q0P140 79 aa7.86□□□□□ -1.15
COL12A1-210ENST00000511023 PCOTHQ58A44 107 aa7.86□□□□□ -1.15
COL12A1-210ENST00000511023 K7ERJ3 54 aa7.84□□□□□ -1.15
COL12A1-210ENST00000511023 SNCGO76070 127 aa7.83□□□□□ -1.16
COL12A1-210ENST00000511023 NDUFV3P56181 108 aaKnown RBP7.83□□□□□ -1.16
COL12A1-210ENST00000511023 A0A1B0GX51 115 aa7.82□□□□□ -1.16
COL12A1-210ENST00000511023 UQCR10Q9UDW1 63 aa7.81□□□□□ -1.16
COL12A1-210ENST00000511023 Q6Q795 121 aa7.79□□□□□ -1.16
COL12A1-210ENST00000511023 FABP2P12104 132 aa7.78□□□□□ -1.16
COL12A1-210ENST00000511023 RPL37P61927 97 aaKnown RBP7.78□□□□□ -1.16
COL12A1-210ENST00000511023 KRTAP19-2Q3LHN2 52 aa7.78□□□□□ -1.16
COL12A1-210ENST00000511023 LCE2CQ5TA81 110 aa7.78□□□□□ -1.16
COL12A1-210ENST00000511023 H3BMG7 143 aa7.77□□□□□ -1.17
COL12A1-210ENST00000511023 PSMB2P49721 201 aa7.76□□□□□ -1.17
COL12A1-210ENST00000511023 TEN1Q86WV5 123 aa7.76□□□□□ -1.17
COL12A1-210ENST00000511023 LST1O00453 97 aa7.75□□□□□ -1.17
COL12A1-210ENST00000511023 A0A1W2PNM2 257 aa7.73□□□□□ -1.17
COL12A1-210ENST00000511023 GHRHP01286 108 aa7.73□□□□□ -1.17
COL12A1-210ENST00000511023 A0A087WSZ3 146 aa7.72□□□□□ -1.17
COL12A1-210ENST00000511023 OBSCN-AS1Q96MR7 158 aa7.72□□□□□ -1.17
COL12A1-210ENST00000511023 ORMDL1Q9P0S3 153 aa7.72□□□□□ -1.17
COL12A1-210ENST00000511023 SS18L2Q9UHA2 77 aa7.72□□□□□ -1.17
COL12A1-210ENST00000511023 DNAL4O96015 105 aa7.71□□□□□ -1.18
COL12A1-210ENST00000511023 COX6CP09669 75 aa7.71□□□□□ -1.18
COL12A1-210ENST00000511023 Q96NJ1 140 aa7.71□□□□□ -1.18
COL12A1-210ENST00000511023 A0A1B0GV72 72 aa7.7□□□□□ -1.18
COL12A1-210ENST00000511023 KRTAP9-2Q9BYQ4 174 aa7.7□□□□□ -1.18
COL12A1-210ENST00000511023 H3BQ85 93 aa7.67□□□□□ -1.18
COL12A1-210ENST00000511023 TMEM256-PLSCR3K7ERE1 68 aa7.67□□□□□ -1.18
COL12A1-210ENST00000511023 Q75L30 129 aa7.67□□□□□ -1.18
COL12A1-210ENST00000511023 ANKRD29Q8N6D5 301 aa7.67□□□□□ -1.18
COL12A1-210ENST00000511023 LCE2BO14633 110 aa7.66□□□□□ -1.18
COL12A1-210ENST00000511023 TRACP01848 142 aa7.66□□□□□ -1.18
COL12A1-210ENST00000511023 TRBV7-4A0A0J9YYF1 115 aa7.65□□□□□ -1.18
COL12A1-210ENST00000511023 MT1HP80294 61 aa7.65□□□□□ -1.18
COL12A1-210ENST00000511023 SCGB1C2P0DMR2 95 aa7.64□□□□□ -1.19
COL12A1-210ENST00000511023 UBE2V1Q13404 147 aa7.64□□□□□ -1.19
COL12A1-210ENST00000511023 FLGP20930 4061 aaPredicted RBP7.61□□□□□ -1.19
COL12A1-210ENST00000511023 CCKP06307 115 aa7.61□□□□□ -1.19
COL12A1-210ENST00000511023 SMIM6P0DI80 62 aa7.61□□□□□ -1.19
COL12A1-210ENST00000511023 C20orf166-AS1Q96NR2 134 aa7.61□□□□□ -1.19
COL12A1-210ENST00000511023 A8MUU9 505 aa7.6□□□□□ -1.19
COL12A1-210ENST00000511023 DSCR10P59022 87 aa7.6□□□□□ -1.19
COL12A1-210ENST00000511023 ATP11AUNQ6ZP68 121 aa7.6□□□□□ -1.19
COL12A1-210ENST00000511023 NAA38Q9BRA0 125 aaKnown RBP7.6□□□□□ -1.19
COL12A1-210ENST00000511023 M0R143 59 aa7.59□□□□□ -1.19
COL12A1-210ENST00000511023 SIGMAR1Q99720 223 aa7.59□□□□□ -1.19
COL12A1-210ENST00000511023 LINC00472Q9H8W2 130 aa7.58□□□□□ -1.2
COL12A1-210ENST00000511023 IGKV4-1P06312 121 aa7.57□□□□□ -1.2
COL12A1-210ENST00000511023 BAALC-AS2P0C853 105 aa7.57□□□□□ -1.2
COL12A1-210ENST00000511023 DEFB116Q30KQ4 102 aa7.57□□□□□ -1.2
COL12A1-210ENST00000511023 RBM3P98179 157 aaKnown RBP7.56□□□□□ -1.2
COL12A1-210ENST00000511023 NOTCH2NLQ7Z3S9 236 aa7.55□□□□□ -1.2
COL12A1-210ENST00000511023 KRTAP16-1A8MUX0 517 aa7.54□□□□□ -1.2
COL12A1-210ENST00000511023 VPS25Q9BRG1 176 aa7.54□□□□□ -1.2
COL12A1-210ENST00000511023 COX6B2Q6YFQ2 88 aa7.53□□□□□ -1.2
COL12A1-210ENST00000511023 DSCR8Q96T75 97 aa7.53□□□□□ -1.2
COL12A1-210ENST00000511023 LINC00313P59037 77 aa7.52□□□□□ -1.21
COL12A1-210ENST00000511023 ATXN8Q156A1 80 aa7.52□□□□□ -1.21
COL12A1-210ENST00000511023 LOC105371267A0A1B0GV96 52 aa7.51□□□□□ -1.21
COL12A1-210ENST00000511023 C9JAW5 83 aa7.49□□□□□ -1.21
COL12A1-210ENST00000511023 TSTD3H0UI37 97 aa7.49□□□□□ -1.21
COL12A1-210ENST00000511023 LORP23490 312 aaPredicted RBP7.49□□□□□ -1.21
COL12A1-210ENST00000511023 KRTAP10-6P60371 365 aaPredicted RBP7.49□□□□□ -1.21
COL12A1-210ENST00000511023 IGHV6-1A0A0B4J1U7 121 aa7.48□□□□□ -1.21
COL12A1-210ENST00000511023 BATFQ16520 125 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms