RNA–Protein interactions for RNA: ENST00000510906.5

PDPN-209, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 786 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-209ENST00000510906 CFC1BP0CG36 223 aa4.91□□□□□ -1.62
PDPN-209ENST00000510906 CFC1P0CG37 223 aa4.91□□□□□ -1.62
PDPN-209ENST00000510906 LINC00483Q53H64 154 aa4.91□□□□□ -1.62
PDPN-209ENST00000510906 S100A7L2Q5SY68 101 aa4.91□□□□□ -1.62
PDPN-209ENST00000510906 Q6ZRX8 168 aa4.91□□□□□ -1.62
PDPN-209ENST00000510906 Q6ZVQ6 151 aa4.91□□□□□ -1.62
PDPN-209ENST00000510906 Q8NBF4 154 aa4.91□□□□□ -1.62
PDPN-209ENST00000510906 TTTY13Q9BZ97 58 aa4.91□□□□□ -1.62
PDPN-209ENST00000510906 HIGD1BQ9P298 99 aa4.91□□□□□ -1.62
PDPN-209ENST00000510906 TRAV23DV6A0A075B6W5 121 aa4.9□□□□□ -1.63
PDPN-209ENST00000510906 HINT1P49773 126 aaPredicted RBP4.9□□□□□ -1.63
PDPN-209ENST00000510906 HSD52Q0P140 79 aa4.9□□□□□ -1.63
PDPN-209ENST00000510906 SPAG11AQ6PDA7 123 aa4.9□□□□□ -1.63
PDPN-209ENST00000510906 MUC17Q685J3 4493 aa4.9□□□□□ -1.63
PDPN-209ENST00000510906 A6NDN8 102 aa4.89□□□□□ -1.63
PDPN-209ENST00000510906 ZNF73O43830 326 aaPredicted RBP4.89□□□□□ -1.63
PDPN-209ENST00000510906 BVES-AS1Q5T3Y7 98 aa4.89□□□□□ -1.63
PDPN-209ENST00000510906 C2orf91Q6ZV80 131 aa4.89□□□□□ -1.63
PDPN-209ENST00000510906 LINC00308Q8TCZ7 52 aa4.89□□□□□ -1.63
PDPN-209ENST00000510906 ZNF815PA8K554 130 aa4.88□□□□□ -1.63
PDPN-209ENST00000510906 TIMM17BO60830 172 aa4.88□□□□□ -1.63
PDPN-209ENST00000510906 MOBPQ13875 183 aa4.88□□□□□ -1.63
PDPN-209ENST00000510906 TAL2Q16559 108 aa4.88□□□□□ -1.63
PDPN-209ENST00000510906 TPRXLQ17RH7 258 aa4.88□□□□□ -1.63
PDPN-209ENST00000510906 SPANXCQ9NY87 97 aa4.88□□□□□ -1.63
PDPN-209ENST00000510906 ST20-AS1Q8NBB2 130 aa4.87□□□□□ -1.63
PDPN-209ENST00000510906 PCP2Q8IVA1 136 aa4.86□□□□□ -1.63
PDPN-209ENST00000510906 OR13C6PQ8NH95 151 aa4.86□□□□□ -1.63
PDPN-209ENST00000510906 SPINK1P00995 79 aa4.85□□□□□ -1.63
PDPN-209ENST00000510906 FP248Q71RG6 208 aaPredicted RBP4.85□□□□□ -1.63
PDPN-209ENST00000510906 SSBP3-AS1Q7Z2R9 100 aa4.85□□□□□ -1.63
PDPN-209ENST00000510906 TAX1BP3O14907 124 aa4.84□□□□□ -1.63
PDPN-209ENST00000510906 SPANXDQ9BXN6 97 aa4.84□□□□□ -1.63
PDPN-209ENST00000510906 CBY1Q9Y3M2 126 aa4.84□□□□□ -1.63
PDPN-209ENST00000510906 KRTAP13-3Q3SY46 172 aa4.83□□□□□ -1.64
PDPN-209ENST00000510906 C9orf153Q5TBE3 101 aa4.83□□□□□ -1.64
PDPN-209ENST00000510906 SCGB1D4Q6XE38 83 aa4.83□□□□□ -1.64
PDPN-209ENST00000510906 CEND1Q8N111 149 aa4.83□□□□□ -1.64
PDPN-209ENST00000510906 C6orf99Q4VX62 202 aa4.82□□□□□ -1.64
PDPN-209ENST00000510906 Q8N377 158 aa4.82□□□□□ -1.64
PDPN-209ENST00000510906 A0A0U1RQV1 116 aa4.81□□□□□ -1.64
PDPN-209ENST00000510906 SPRR1BP22528 89 aa4.81□□□□□ -1.64
PDPN-209ENST00000510906 COX7BP24311 80 aa4.81□□□□□ -1.64
PDPN-209ENST00000510906 ELOF1P60002 83 aaKnown RBP4.81□□□□□ -1.64
PDPN-209ENST00000510906 RPS29P62273 56 aaKnown RBP4.81□□□□□ -1.64
PDPN-209ENST00000510906 VAMP3Q15836 100 aa4.81□□□□□ -1.64
PDPN-209ENST00000510906 GTF2H5Q6ZYL4 71 aa4.81□□□□□ -1.64
PDPN-209ENST00000510906 HIST1H4GQ99525 98 aa4.81□□□□□ -1.64
PDPN-209ENST00000510906 DHRS4-AS1Q9P1J3 65 aa4.81□□□□□ -1.64
PDPN-209ENST00000510906 SLC25A20O43772 301 aa4.8□□□□□ -1.64
PDPN-209ENST00000510906 MUSTN1Q8IVN3 82 aa4.8□□□□□ -1.64
PDPN-209ENST00000510906 SYNE2Q8WXH0 6885 aaKnown RBP4.79□□□□□ -1.64
PDPN-209ENST00000510906 IFITM1P13164 125 aa4.79□□□□□ -1.64
PDPN-209ENST00000510906 SSPOA2VEC9 5147 aa4.78□□□□□ -1.64
PDPN-209ENST00000510906 A0A1B0GWB2 263 aa4.78□□□□□ -1.64
PDPN-209ENST00000510906 FABP2P12104 132 aa4.78□□□□□ -1.64
PDPN-209ENST00000510906 FXYD2P54710 66 aa4.78□□□□□ -1.64
PDPN-209ENST00000510906 Q6ZVH6 145 aa4.78□□□□□ -1.64
PDPN-209ENST00000510906 DEFB105AQ8NG35 78 aa4.78□□□□□ -1.64
PDPN-209ENST00000510906 COPS9Q8WXC6 57 aa4.78□□□□□ -1.64
PDPN-209ENST00000510906 A0A1W2PPM0 123 aa4.77□□□□□ -1.65
PDPN-209ENST00000510906 Q1RN00 199 aa4.77□□□□□ -1.65
PDPN-209ENST00000510906 HRCT1Q6UXD1 115 aa4.77□□□□□ -1.65
PDPN-209ENST00000510906 NHP2Q9NX24 153 aaKnown RBP4.77□□□□□ -1.65
PDPN-209ENST00000510906 LAMTOR3Q9UHA4 124 aa4.77□□□□□ -1.65
PDPN-209ENST00000510906 TRBV7-6A0A0J9YX20 115 aa4.76□□□□□ -1.65
PDPN-209ENST00000510906 H3BUT2 72 aa4.76□□□□□ -1.65
PDPN-209ENST00000510906 K7EP34 96 aa4.76□□□□□ -1.65
PDPN-209ENST00000510906 ASB16-AS1Q495Z4 193 aa4.76□□□□□ -1.65
PDPN-209ENST00000510906 LYRM7Q5U5X0 104 aa4.76□□□□□ -1.65
PDPN-209ENST00000510906 KRTAP9-8Q9BYQ0 159 aa4.76□□□□□ -1.65
PDPN-209ENST00000510906 TEX49A0A1B0GTD5 131 aa4.75□□□□□ -1.65
PDPN-209ENST00000510906 SMIM11BQ8TCY0 68 aa4.75□□□□□ -1.65
PDPN-209ENST00000510906 RAB37Q96AX2 223 aa4.75□□□□□ -1.65
PDPN-209ENST00000510906 TRAV13-2A0A0B4J235 113 aa4.74□□□□□ -1.65
PDPN-209ENST00000510906 MT3P25713 68 aa4.74□□□□□ -1.65
PDPN-209ENST00000510906 KRTAP4-1Q9BYQ7 146 aa4.74□□□□□ -1.65
PDPN-209ENST00000510906 SPCS1Q9Y6A9 102 aa4.74□□□□□ -1.65
PDPN-209ENST00000510906 IGLV5-48A0A075B6I7 105 aa4.73□□□□□ -1.65
PDPN-209ENST00000510906 A0A0G2JQZ4 141 aa4.73□□□□□ -1.65
PDPN-209ENST00000510906 LIMD2Q9BT23 127 aa4.73□□□□□ -1.65
PDPN-209ENST00000510906 A0A0B4J2C4 111 aa4.72□□□□□ -1.65
PDPN-209ENST00000510906 H7C2G1 150 aa4.72□□□□□ -1.65
PDPN-209ENST00000510906 K7ERJ3 54 aa4.72□□□□□ -1.65
PDPN-209ENST00000510906 CD164Q04900 197 aa4.71□□□□□ -1.66
PDPN-209ENST00000510906 PRO1854Q9UHT4 67 aa4.71□□□□□ -1.66
PDPN-209ENST00000510906 TRBV20-1A0A075B6N2 111 aa4.7□□□□□ -1.66
PDPN-209ENST00000510906 F8W1H4 67 aa4.7□□□□□ -1.66
PDPN-209ENST00000510906 K7ERU9 68 aa4.7□□□□□ -1.66
PDPN-209ENST00000510906 C9orf92A6NGG3 77 aa4.69□□□□□ -1.66
PDPN-209ENST00000510906 LINC00575Q6W349 94 aa4.69□□□□□ -1.66
PDPN-209ENST00000510906 NAA38Q9BRA0 125 aaKnown RBP4.69□□□□□ -1.66
PDPN-209ENST00000510906 OCR1Q9BZK8 76 aa4.69□□□□□ -1.66
PDPN-209ENST00000510906 OCIAD2Q56VL3 154 aa4.68□□□□□ -1.66
PDPN-209ENST00000510906 Q5XG85 94 aa4.68□□□□□ -1.66
PDPN-209ENST00000510906 hADV29S1A0JD25 119 aa4.67□□□□□ -1.66
PDPN-209ENST00000510906 NDUFAF8A1L188 74 aa4.67□□□□□ -1.66
PDPN-209ENST00000510906 NDUFV3P56181 108 aaKnown RBP4.67□□□□□ -1.66
PDPN-209ENST00000510906 C1orf195Q5TG92 126 aa4.67□□□□□ -1.66
PDPN-209ENST00000510906 Q6ZQY7 126 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms