RNA–Protein interactions for RNA: ENST00000510526.2

HMGB3P3-201, Transcript of high mobility group box 3 pseudogene 3, humanhuman

BASIC

Gene HMGB3P3, Length 400 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P3-201ENST00000510526 RHPN1-AS1Q9BWJ2 59 aa1.14□□□□□ -2.23
HMGB3P3-201ENST00000510526 Q9Y3F1 56 aa1.14□□□□□ -2.23
HMGB3P3-201ENST00000510526 APELAP0DMC3 54 aa1.13□□□□□ -2.23
HMGB3P3-201ENST00000510526 DEFB103AP81534 67 aa1.13□□□□□ -2.23
HMGB3P3-201ENST00000510526 OTOGLQ3ZCN5 2332 aa1.12□□□□□ -2.23
HMGB3P3-201ENST00000510526 SPINK1P00995 79 aa1.12□□□□□ -2.23
HMGB3P3-201ENST00000510526 C10orf95Q9H7T3 257 aa1.12□□□□□ -2.23
HMGB3P3-201ENST00000510526 S4R3F8 94 aa1.12□□□□□ -2.23
HMGB3P3-201ENST00000510526 JMJD1CQ15652 2540 aa1.12□□□□□ -2.23
HMGB3P3-201ENST00000510526 COL6A6A6NMZ7 2263 aa1.12□□□□□ -2.23
HMGB3P3-201ENST00000510526 PKDREJQ9NTG1 2253 aa1.12□□□□□ -2.23
HMGB3P3-201ENST00000510526 CACNA1HO95180 2353 aa1.1□□□□□ -2.23
HMGB3P3-201ENST00000510526 SPRR5A0A1B0GTR4 108 aa1.1□□□□□ -2.23
HMGB3P3-201ENST00000510526 HTN1P15515 57 aa1.1□□□□□ -2.23
HMGB3P3-201ENST00000510526 KRTAP13-4Q3LI77 160 aa1.1□□□□□ -2.23
HMGB3P3-201ENST00000510526 FLG2Q5D862 2391 aaPredicted RBP1.1□□□□□ -2.23
HMGB3P3-201ENST00000510526 WNK1Q9H4A3 2382 aa1.1□□□□□ -2.23
HMGB3P3-201ENST00000510526 ZDBF2Q9HCK1 2354 aa1.1□□□□□ -2.23
HMGB3P3-201ENST00000510526 M0QZ58 72 aa1.09□□□□□ -2.23
HMGB3P3-201ENST00000510526 LELP1Q5T871 98 aa1.09□□□□□ -2.23
HMGB3P3-201ENST00000510526 DEFB108BQ8NET1 73 aa1.09□□□□□ -2.23
HMGB3P3-201ENST00000510526 PTPRZ1P23471 2315 aaPredicted RBP1.09□□□□□ -2.24
HMGB3P3-201ENST00000510526 PIEZO2Q9H5I5 2752 aa1.08□□□□□ -2.24
HMGB3P3-201ENST00000510526 ZNF462Q96JM2 2506 aa1.08□□□□□ -2.24
HMGB3P3-201ENST00000510526 AKAP6Q13023 2319 aa1.07□□□□□ -2.24
HMGB3P3-201ENST00000510526 IGF2RP11717 2491 aa1.07□□□□□ -2.24
HMGB3P3-201ENST00000510526 DEFB110Q30KQ9 67 aa1.07□□□□□ -2.24
HMGB3P3-201ENST00000510526 HIVEP2P31629 2446 aa1.07□□□□□ -2.24
HMGB3P3-201ENST00000510526 ROS1P08922 2347 aa1.06□□□□□ -2.24
HMGB3P3-201ENST00000510526 PCNX1Q96RV3 2341 aa1.06□□□□□ -2.24
HMGB3P3-201ENST00000510526 SPTA1P02549 2419 aa1.06□□□□□ -2.24
HMGB3P3-201ENST00000510526 SPTBN1Q01082 2364 aaKnown RBP1.06□□□□□ -2.24
HMGB3P3-201ENST00000510526 A0A0D9SG42 100 aa1.05□□□□□ -2.24
HMGB3P3-201ENST00000510526 ABCA2Q9BZC7 2435 aa1.04□□□□□ -2.24
HMGB3P3-201ENST00000510526 CSPG4Q6UVK1 2322 aa1.04□□□□□ -2.24
HMGB3P3-201ENST00000510526 SPTBN2O15020 2390 aa1.04□□□□□ -2.24
HMGB3P3-201ENST00000510526 ACACAQ13085 2346 aa1.03□□□□□ -2.24
HMGB3P3-201ENST00000510526 CRCT1Q9UGL9 99 aa1.03□□□□□ -2.24
HMGB3P3-201ENST00000510526 H3BNG1 76 aa1.02□□□□□ -2.25
HMGB3P3-201ENST00000510526 DEFB1P60022 68 aa1.02□□□□□ -2.25
HMGB3P3-201ENST00000510526 BAHCC1Q9P281 2608 aa1.02□□□□□ -2.25
HMGB3P3-201ENST00000510526 MAP1BP46821 2468 aaKnown RBP1.01□□□□□ -2.25
HMGB3P3-201ENST00000510526 CEP250Q9BV73 2442 aa1.01□□□□□ -2.25
HMGB3P3-201ENST00000510526 C2CD3Q4AC94 2353 aa1.01□□□□□ -2.25
HMGB3P3-201ENST00000510526 J3QKU1 62 aa1.01□□□□□ -2.25
HMGB3P3-201ENST00000510526 DEFB124Q8NES8 71 aa1.01□□□□□ -2.25
HMGB3P3-201ENST00000510526 SPART-AS1P0CW21 52 aa1□□□□□ -2.25
HMGB3P3-201ENST00000510526 KRTAP12-1P59990 96 aa1□□□□□ -2.25
HMGB3P3-201ENST00000510526 SPINK6Q6UWN8 80 aa1□□□□□ -2.25
HMGB3P3-201ENST00000510526 F8P00451 2351 aa0.99□□□□□ -2.25
HMGB3P3-201ENST00000510526 TNP1P09430 55 aa0.99□□□□□ -2.25
HMGB3P3-201ENST00000510526 DEFB136Q30KP8 78 aa0.99□□□□□ -2.25
HMGB3P3-201ENST00000510526 NCOR1O75376 2440 aa0.99□□□□□ -2.25
HMGB3P3-201ENST00000510526 GVINP1Q7Z2Y8 2422 aa0.99□□□□□ -2.25
HMGB3P3-201ENST00000510526 CEP290O15078 2479 aa0.98□□□□□ -2.25
HMGB3P3-201ENST00000510526 C9orf92A6NGG3 77 aa0.98□□□□□ -2.25
HMGB3P3-201ENST00000510526 CD52P31358 61 aa0.98□□□□□ -2.25
HMGB3P3-201ENST00000510526 LINC01556Q5JQF7 62 aa0.98□□□□□ -2.25
HMGB3P3-201ENST00000510526 PKD1L2Q7Z442 2459 aa0.98□□□□□ -2.25
HMGB3P3-201ENST00000510526 MUC6Q6W4X9 2439 aa0.97□□□□□ -2.25
HMGB3P3-201ENST00000510526 ABCA12Q86UK0 2595 aa0.97□□□□□ -2.25
HMGB3P3-201ENST00000510526 A0A096LNI7 61 aa0.97□□□□□ -2.25
HMGB3P3-201ENST00000510526 KRTAP21-3Q3LHN1 58 aa0.97□□□□□ -2.25
HMGB3P3-201ENST00000510526 KRTAP4-1Q9BYQ7 146 aa0.97□□□□□ -2.25
HMGB3P3-201ENST00000510526 ALMS1Q8TCU4 4167 aa0.97□□□□□ -2.25
HMGB3P3-201ENST00000510526 DEFB135Q30KP9 77 aa0.96□□□□□ -2.26
HMGB3P3-201ENST00000510526 KRTAP13-1Q8IUC0 172 aa0.96□□□□□ -2.26
HMGB3P3-201ENST00000510526 CREBBPQ92793 2442 aa0.96□□□□□ -2.26
HMGB3P3-201ENST00000510526 NBASA2RRP1 2371 aa0.96□□□□□ -2.26
HMGB3P3-201ENST00000510526 NCOR2Q9Y618 2525 aa0.95□□□□□ -2.26
HMGB3P3-201ENST00000510526 APC2O95996 2303 aa0.95□□□□□ -2.26
HMGB3P3-201ENST00000510526 SPTBN4Q9H254 2564 aa0.94□□□□□ -2.26
HMGB3P3-201ENST00000510526 RPS29P62273 56 aaKnown RBP0.94□□□□□ -2.26
HMGB3P3-201ENST00000510526 A0A096LPF7 62 aa0.93□□□□□ -2.26
HMGB3P3-201ENST00000510526 DEFB133Q30KQ1 61 aa0.93□□□□□ -2.26
HMGB3P3-201ENST00000510526 HECTD1Q9ULT8 2610 aa0.93□□□□□ -2.26
HMGB3P3-201ENST00000510526 DSPP15924 2871 aaKnown RBP0.93□□□□□ -2.26
HMGB3P3-201ENST00000510526 NAV2Q8IVL1 2488 aa0.92□□□□□ -2.26
HMGB3P3-201ENST00000510526 KRTAP12-4P60329 112 aa0.92□□□□□ -2.26
HMGB3P3-201ENST00000510526 ANKHD1Q8IWZ3 2542 aaKnown RBP0.91□□□□□ -2.26
HMGB3P3-201ENST00000510526 CCDC168Q8NDH2 2452 aa0.91□□□□□ -2.26
HMGB3P3-201ENST00000510526 HIVEP3Q5T1R4 2406 aa0.91□□□□□ -2.26
HMGB3P3-201ENST00000510526 TTC28Q96AY4 2481 aa0.91□□□□□ -2.26
HMGB3P3-201ENST00000510526 FAM186AA6NE01 2351 aa0.9□□□□□ -2.27
HMGB3P3-201ENST00000510526 UBR5O95071 2799 aaPredicted RBP0.9□□□□□ -2.27
HMGB3P3-201ENST00000510526 M0R2T5 61 aa0.9□□□□□ -2.27
HMGB3P3-201ENST00000510526 TRANK1O15050 2925 aa0.9□□□□□ -2.27
HMGB3P3-201ENST00000510526 FBN1P35555 2871 aaKnown RBP0.9□□□□□ -2.27
HMGB3P3-201ENST00000510526 DMBT1Q9UGM3 2413 aaPredicted RBP0.89□□□□□ -2.27
HMGB3P3-201ENST00000510526 SETD2Q9BYW2 2564 aaPredicted RBP0.89□□□□□ -2.27
HMGB3P3-201ENST00000510526 EP300Q09472 2414 aaPredicted RBP0.89□□□□□ -2.27
HMGB3P3-201ENST00000510526 LRRK2Q5S007 2527 aa0.88□□□□□ -2.27
HMGB3P3-201ENST00000510526 EPG5Q9HCE0 2579 aa0.88□□□□□ -2.27
HMGB3P3-201ENST00000510526 CELSR2Q9HCU4 2923 aa0.88□□□□□ -2.27
HMGB3P3-201ENST00000510526 RIF1Q5UIP0 2472 aaKnown RBP0.88□□□□□ -2.27
HMGB3P3-201ENST00000510526 RP1L1Q8IWN7 2480 aaPredicted RBP0.88□□□□□ -2.27
HMGB3P3-201ENST00000510526 MEGF8Q7Z7M0 2845 aa0.88□□□□□ -2.27
HMGB3P3-201ENST00000510526 CHD6Q8TD26 2715 aa0.87□□□□□ -2.27
HMGB3P3-201ENST00000510526 COL6A5A8TX70 2615 aa0.87□□□□□ -2.27
HMGB3P3-201ENST00000510526 HTN3P15516 51 aa0.87□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms