RNA–Protein interactions for RNA: ENST00000510526.2

HMGB3P3-201, Transcript of high mobility group box 3 pseudogene 3, humanhuman

BASIC

Gene HMGB3P3, Length 400 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P3-201ENST00000510526 RHPN1-AS1Q9BWJ2 59 aa1.14□□□□□ -2.23
HMGB3P3-201ENST00000510526 Q9Y3F1 56 aa1.14□□□□□ -2.23
HMGB3P3-201ENST00000510526 APELAP0DMC3 54 aa1.13□□□□□ -2.23
HMGB3P3-201ENST00000510526 DEFB103AP81534 67 aa1.13□□□□□ -2.23
HMGB3P3-201ENST00000510526 OTOGLQ3ZCN5 2332 aa1.12□□□□□ -2.23
HMGB3P3-201ENST00000510526 SPINK1P00995 79 aa1.12□□□□□ -2.23
HMGB3P3-201ENST00000510526 C10orf95Q9H7T3 257 aa1.12□□□□□ -2.23
HMGB3P3-201ENST00000510526 S4R3F8 94 aa1.12□□□□□ -2.23
HMGB3P3-201ENST00000510526 JMJD1CQ15652 2540 aa1.12□□□□□ -2.23
HMGB3P3-201ENST00000510526 COL6A6A6NMZ7 2263 aa1.12□□□□□ -2.23
HMGB3P3-201ENST00000510526 PKDREJQ9NTG1 2253 aa1.12□□□□□ -2.23
HMGB3P3-201ENST00000510526 CACNA1HO95180 2353 aa1.1□□□□□ -2.23
HMGB3P3-201ENST00000510526 SPRR5A0A1B0GTR4 108 aa1.1□□□□□ -2.23
HMGB3P3-201ENST00000510526 HTN1P15515 57 aa1.1□□□□□ -2.23
HMGB3P3-201ENST00000510526 KRTAP13-4Q3LI77 160 aa1.1□□□□□ -2.23
HMGB3P3-201ENST00000510526 FLG2Q5D862 2391 aaPredicted RBP1.1□□□□□ -2.23
HMGB3P3-201ENST00000510526 WNK1Q9H4A3 2382 aa1.1□□□□□ -2.23
HMGB3P3-201ENST00000510526 ZDBF2Q9HCK1 2354 aa1.1□□□□□ -2.23
HMGB3P3-201ENST00000510526 M0QZ58 72 aa1.09□□□□□ -2.23
HMGB3P3-201ENST00000510526 LELP1Q5T871 98 aa1.09□□□□□ -2.23
HMGB3P3-201ENST00000510526 DEFB108BQ8NET1 73 aa1.09□□□□□ -2.23
HMGB3P3-201ENST00000510526 PTPRZ1P23471 2315 aaPredicted RBP1.09□□□□□ -2.24
HMGB3P3-201ENST00000510526 PIEZO2Q9H5I5 2752 aa1.08□□□□□ -2.24
HMGB3P3-201ENST00000510526 ZNF462Q96JM2 2506 aa1.08□□□□□ -2.24
HMGB3P3-201ENST00000510526 AKAP6Q13023 2319 aa1.07□□□□□ -2.24
HMGB3P3-201ENST00000510526 IGF2RP11717 2491 aa1.07□□□□□ -2.24
HMGB3P3-201ENST00000510526 DEFB110Q30KQ9 67 aa1.07□□□□□ -2.24
HMGB3P3-201ENST00000510526 HIVEP2P31629 2446 aa1.07□□□□□ -2.24
HMGB3P3-201ENST00000510526 ROS1P08922 2347 aa1.06□□□□□ -2.24
HMGB3P3-201ENST00000510526 PCNX1Q96RV3 2341 aa1.06□□□□□ -2.24
HMGB3P3-201ENST00000510526 SPTA1P02549 2419 aa1.06□□□□□ -2.24
HMGB3P3-201ENST00000510526 SPTBN1Q01082 2364 aaKnown RBP1.06□□□□□ -2.24
HMGB3P3-201ENST00000510526 A0A0D9SG42 100 aa1.05□□□□□ -2.24
HMGB3P3-201ENST00000510526 ABCA2Q9BZC7 2435 aa1.04□□□□□ -2.24
HMGB3P3-201ENST00000510526 CSPG4Q6UVK1 2322 aa1.04□□□□□ -2.24
HMGB3P3-201ENST00000510526 SPTBN2O15020 2390 aa1.04□□□□□ -2.24
HMGB3P3-201ENST00000510526 ACACAQ13085 2346 aa1.03□□□□□ -2.24
HMGB3P3-201ENST00000510526 CRCT1Q9UGL9 99 aa1.03□□□□□ -2.24
HMGB3P3-201ENST00000510526 H3BNG1 76 aa1.02□□□□□ -2.25
HMGB3P3-201ENST00000510526 DEFB1P60022 68 aa1.02□□□□□ -2.25
HMGB3P3-201ENST00000510526 BAHCC1Q9P281 2608 aa1.02□□□□□ -2.25
HMGB3P3-201ENST00000510526 MAP1BP46821 2468 aaKnown RBP1.01□□□□□ -2.25
HMGB3P3-201ENST00000510526 CEP250Q9BV73 2442 aa1.01□□□□□ -2.25
HMGB3P3-201ENST00000510526 C2CD3Q4AC94 2353 aa1.01□□□□□ -2.25
HMGB3P3-201ENST00000510526 J3QKU1 62 aa1.01□□□□□ -2.25
HMGB3P3-201ENST00000510526 DEFB124Q8NES8 71 aa1.01□□□□□ -2.25
HMGB3P3-201ENST00000510526 SPART-AS1P0CW21 52 aa1□□□□□ -2.25
HMGB3P3-201ENST00000510526 KRTAP12-1P59990 96 aa1□□□□□ -2.25
HMGB3P3-201ENST00000510526 SPINK6Q6UWN8 80 aa1□□□□□ -2.25
HMGB3P3-201ENST00000510526 F8P00451 2351 aa0.99□□□□□ -2.25
HMGB3P3-201ENST00000510526 TNP1P09430 55 aa0.99□□□□□ -2.25
HMGB3P3-201ENST00000510526 DEFB136Q30KP8 78 aa0.99□□□□□ -2.25
HMGB3P3-201ENST00000510526 NCOR1O75376 2440 aa0.99□□□□□ -2.25
HMGB3P3-201ENST00000510526 GVINP1Q7Z2Y8 2422 aa0.99□□□□□ -2.25
HMGB3P3-201ENST00000510526 CEP290O15078 2479 aa0.98□□□□□ -2.25
HMGB3P3-201ENST00000510526 C9orf92A6NGG3 77 aa0.98□□□□□ -2.25
HMGB3P3-201ENST00000510526 CD52P31358 61 aa0.98□□□□□ -2.25
HMGB3P3-201ENST00000510526 LINC01556Q5JQF7 62 aa0.98□□□□□ -2.25
HMGB3P3-201ENST00000510526 PKD1L2Q7Z442 2459 aa0.98□□□□□ -2.25
HMGB3P3-201ENST00000510526 MUC6Q6W4X9 2439 aa0.97□□□□□ -2.25
HMGB3P3-201ENST00000510526 ABCA12Q86UK0 2595 aa0.97□□□□□ -2.25
HMGB3P3-201ENST00000510526 A0A096LNI7 61 aa0.97□□□□□ -2.25
HMGB3P3-201ENST00000510526 KRTAP21-3Q3LHN1 58 aa0.97□□□□□ -2.25
HMGB3P3-201ENST00000510526 KRTAP4-1Q9BYQ7 146 aa0.97□□□□□ -2.25
HMGB3P3-201ENST00000510526 ALMS1Q8TCU4 4167 aa0.97□□□□□ -2.25
HMGB3P3-201ENST00000510526 DEFB135Q30KP9 77 aa0.96□□□□□ -2.26
HMGB3P3-201ENST00000510526 KRTAP13-1Q8IUC0 172 aa0.96□□□□□ -2.26
HMGB3P3-201ENST00000510526 CREBBPQ92793 2442 aa0.96□□□□□ -2.26
HMGB3P3-201ENST00000510526 NBASA2RRP1 2371 aa0.96□□□□□ -2.26
HMGB3P3-201ENST00000510526 NCOR2Q9Y618 2525 aa0.95□□□□□ -2.26
HMGB3P3-201ENST00000510526 APC2O95996 2303 aa0.95□□□□□ -2.26
HMGB3P3-201ENST00000510526 SPTBN4Q9H254 2564 aa0.94□□□□□ -2.26
HMGB3P3-201ENST00000510526 RPS29P62273 56 aaKnown RBP0.94□□□□□ -2.26
HMGB3P3-201ENST00000510526 A0A096LPF7 62 aa0.93□□□□□ -2.26
HMGB3P3-201ENST00000510526 DEFB133Q30KQ1 61 aa0.93□□□□□ -2.26
HMGB3P3-201ENST00000510526 HECTD1Q9ULT8 2610 aa0.93□□□□□ -2.26
HMGB3P3-201ENST00000510526 DSPP15924 2871 aaKnown RBP0.93□□□□□ -2.26
HMGB3P3-201ENST00000510526 NAV2Q8IVL1 2488 aa0.92□□□□□ -2.26
HMGB3P3-201ENST00000510526 KRTAP12-4P60329 112 aa0.92□□□□□ -2.26
HMGB3P3-201ENST00000510526 ANKHD1Q8IWZ3 2542 aaKnown RBP0.91□□□□□ -2.26
HMGB3P3-201ENST00000510526 CCDC168Q8NDH2 2452 aa0.91□□□□□ -2.26
HMGB3P3-201ENST00000510526 HIVEP3Q5T1R4 2406 aa0.91□□□□□ -2.26
HMGB3P3-201ENST00000510526 TTC28Q96AY4 2481 aa0.91□□□□□ -2.26
HMGB3P3-201ENST00000510526 FAM186AA6NE01 2351 aa0.9□□□□□ -2.27
HMGB3P3-201ENST00000510526 UBR5O95071 2799 aaPredicted RBP0.9□□□□□ -2.27
HMGB3P3-201ENST00000510526 M0R2T5 61 aa0.9□□□□□ -2.27
HMGB3P3-201ENST00000510526 TRANK1O15050 2925 aa0.9□□□□□ -2.27
HMGB3P3-201ENST00000510526 FBN1P35555 2871 aaKnown RBP0.9□□□□□ -2.27
HMGB3P3-201ENST00000510526 DMBT1Q9UGM3 2413 aaPredicted RBP0.89□□□□□ -2.27
HMGB3P3-201ENST00000510526 SETD2Q9BYW2 2564 aaPredicted RBP0.89□□□□□ -2.27
HMGB3P3-201ENST00000510526 EP300Q09472 2414 aaPredicted RBP0.89□□□□□ -2.27
HMGB3P3-201ENST00000510526 LRRK2Q5S007 2527 aa0.88□□□□□ -2.27
HMGB3P3-201ENST00000510526 EPG5Q9HCE0 2579 aa0.88□□□□□ -2.27
HMGB3P3-201ENST00000510526 CELSR2Q9HCU4 2923 aa0.88□□□□□ -2.27
HMGB3P3-201ENST00000510526 RIF1Q5UIP0 2472 aaKnown RBP0.88□□□□□ -2.27
HMGB3P3-201ENST00000510526 RP1L1Q8IWN7 2480 aaPredicted RBP0.88□□□□□ -2.27
HMGB3P3-201ENST00000510526 MEGF8Q7Z7M0 2845 aa0.88□□□□□ -2.27
HMGB3P3-201ENST00000510526 CHD6Q8TD26 2715 aa0.87□□□□□ -2.27
HMGB3P3-201ENST00000510526 COL6A5A8TX70 2615 aa0.87□□□□□ -2.27
HMGB3P3-201ENST00000510526 HTN3P15516 51 aa0.87□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms