RNA–Protein interactions for RNA: ENST00000509101.1

CXCL1-202, Transcript of C-X-C motif chemokine ligand 1, humanhuman

TSL 3

Gene CXCL1, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-202ENST00000509101 COX7BP24311 80 aa8.4□□□□□ -1.06
CXCL1-202ENST00000509101 USH2AO75445 5202 aa8.4□□□□□ -1.06
CXCL1-202ENST00000509101 A0A0G2JQZ4 141 aa8.39□□□□□ -1.07
CXCL1-202ENST00000509101 A4D1N5 150 aa8.39□□□□□ -1.07
CXCL1-202ENST00000509101 Q6Q795 121 aa8.39□□□□□ -1.07
CXCL1-202ENST00000509101 C14orf144Q96I85 54 aa8.39□□□□□ -1.07
CXCL1-202ENST00000509101 PAM16Q9Y3D7 125 aa8.39□□□□□ -1.07
CXCL1-202ENST00000509101 SPATA45Q537H7 98 aa8.38□□□□□ -1.07
CXCL1-202ENST00000509101 SMIM29Q86T20 159 aa8.38□□□□□ -1.07
CXCL1-202ENST00000509101 TRAV13-2A0A0B4J235 113 aa8.37□□□□□ -1.07
CXCL1-202ENST00000509101 TEX49A0A1B0GTD5 131 aa8.37□□□□□ -1.07
CXCL1-202ENST00000509101 DLEU1O43261 78 aa8.37□□□□□ -1.07
CXCL1-202ENST00000509101 SMIM11BQ8TCY0 68 aa8.37□□□□□ -1.07
CXCL1-202ENST00000509101 TMA7Q9Y2S6 64 aaKnown RBP8.37□□□□□ -1.07
CXCL1-202ENST00000509101 TRBV7-6A0A0J9YX20 115 aa8.36□□□□□ -1.07
CXCL1-202ENST00000509101 HIST1H4GQ99525 98 aa8.35□□□□□ -1.07
CXCL1-202ENST00000509101 C12orf57Q99622 126 aa8.35□□□□□ -1.07
CXCL1-202ENST00000509101 VAMP8Q9BV40 100 aa8.35□□□□□ -1.07
CXCL1-202ENST00000509101 A0A1B0GWB2 263 aa8.33□□□□□ -1.08
CXCL1-202ENST00000509101 PYY3Q5JQD4 70 aa8.33□□□□□ -1.08
CXCL1-202ENST00000509101 C2orf91Q6ZV80 131 aa8.33□□□□□ -1.08
CXCL1-202ENST00000509101 CFC1P0CG37 223 aa8.31□□□□□ -1.08
CXCL1-202ENST00000509101 HIGD1BQ9P298 99 aa8.3□□□□□ -1.08
CXCL1-202ENST00000509101 TCL1BO95988 128 aa8.29□□□□□ -1.08
CXCL1-202ENST00000509101 IGLV5-48A0A075B6I7 105 aa8.28□□□□□ -1.08
CXCL1-202ENST00000509101 KRTAP9-8Q9BYQ0 159 aa8.28□□□□□ -1.08
CXCL1-202ENST00000509101 FCGBPQ9Y6R7 5405 aaPredicted RBP8.27□□□□□ -1.09
CXCL1-202ENST00000509101 ATP11AUNQ6ZP68 121 aa8.26□□□□□ -1.09
CXCL1-202ENST00000509101 LINC00575Q6W349 94 aa8.25□□□□□ -1.09
CXCL1-202ENST00000509101 VAMP3Q15836 100 aa8.24□□□□□ -1.09
CXCL1-202ENST00000509101 Q75L30 129 aa8.23□□□□□ -1.09
CXCL1-202ENST00000509101 CEND1Q8N111 149 aa8.23□□□□□ -1.09
CXCL1-202ENST00000509101 OBSCN-AS1Q96MR7 158 aa8.23□□□□□ -1.09
CXCL1-202ENST00000509101 NHP2Q9NX24 153 aaKnown RBP8.23□□□□□ -1.09
CXCL1-202ENST00000509101 FXYD2P54710 66 aa8.21□□□□□ -1.1
CXCL1-202ENST00000509101 RAB37Q96AX2 223 aa8.21□□□□□ -1.1
CXCL1-202ENST00000509101 A0A0B4J2C4 111 aa8.2□□□□□ -1.1
CXCL1-202ENST00000509101 hADV29S1A0JD25 119 aa8.2□□□□□ -1.1
CXCL1-202ENST00000509101 Q6ZQY7 126 aa8.2□□□□□ -1.1
CXCL1-202ENST00000509101 F8WEM9 126 aa8.19□□□□□ -1.1
CXCL1-202ENST00000509101 BVES-AS1Q5T3Y7 98 aa8.18□□□□□ -1.1
CXCL1-202ENST00000509101 KRTAP19-1Q8IUB9 90 aa8.17□□□□□ -1.1
CXCL1-202ENST00000509101 TRBV7-7A0A0K0K1E9 115 aa8.15□□□□□ -1.1
CXCL1-202ENST00000509101 FAM218AQ96MZ4 157 aa8.15□□□□□ -1.1
CXCL1-202ENST00000509101 PRO1854Q9UHT4 67 aa8.15□□□□□ -1.1
CXCL1-202ENST00000509101 MT2AP02795 61 aa8.14□□□□□ -1.11
CXCL1-202ENST00000509101 HSD52Q0P140 79 aa8.14□□□□□ -1.11
CXCL1-202ENST00000509101 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.14□□□□□ -1.11
CXCL1-202ENST00000509101 TMEM238LA0A1B0GVL6 79 aa8.13□□□□□ -1.11
CXCL1-202ENST00000509101 A6NJY4 79 aa8.13□□□□□ -1.11
CXCL1-202ENST00000509101 CLEC2BQ92478 149 aa8.13□□□□□ -1.11
CXCL1-202ENST00000509101 Q96NJ1 140 aa8.13□□□□□ -1.11
CXCL1-202ENST00000509101 UQCR10Q9UDW1 63 aa8.13□□□□□ -1.11
CXCL1-202ENST00000509101 K7ERJ3 54 aa8.12□□□□□ -1.11
CXCL1-202ENST00000509101 LCE2BO14633 110 aa8.11□□□□□ -1.11
CXCL1-202ENST00000509101 IGFL1Q6UW32 110 aa8.11□□□□□ -1.11
CXCL1-202ENST00000509101 TRBV20-1A0A075B6N2 111 aa8.1□□□□□ -1.11
CXCL1-202ENST00000509101 H0YGX0 51 aa8.1□□□□□ -1.11
CXCL1-202ENST00000509101 Q6JHZ5 121 aa8.1□□□□□ -1.11
CXCL1-202ENST00000509101 MACF1Q9UPN3 7388 aaKnown RBP8.09□□□□□ -1.11
CXCL1-202ENST00000509101 TRIAP1O43715 76 aa8.09□□□□□ -1.11
CXCL1-202ENST00000509101 MT1FP04733 61 aa8.08□□□□□ -1.12
CXCL1-202ENST00000509101 SYNE2Q8WXH0 6885 aaKnown RBP8.08□□□□□ -1.12
CXCL1-202ENST00000509101 OCIAD2Q56VL3 154 aa8.07□□□□□ -1.12
CXCL1-202ENST00000509101 C20orf166-AS1Q96NR2 134 aa8.07□□□□□ -1.12
CXCL1-202ENST00000509101 LST1O00453 97 aa8.06□□□□□ -1.12
CXCL1-202ENST00000509101 PPDPFLQ8WWR9 84 aa8.06□□□□□ -1.12
CXCL1-202ENST00000509101 H3BUT2 72 aa8.05□□□□□ -1.12
CXCL1-202ENST00000509101 SNHG12Q9BXW3 62 aa8.05□□□□□ -1.12
CXCL1-202ENST00000509101 A8MUU9 505 aa8.04□□□□□ -1.12
CXCL1-202ENST00000509101 FAM236DA0A1B0GTK5 79 aa8.03□□□□□ -1.12
CXCL1-202ENST00000509101 FAM236CP0DP71 79 aa8.03□□□□□ -1.12
CXCL1-202ENST00000509101 KRTAP9-3Q9BYQ3 159 aa8.03□□□□□ -1.12
CXCL1-202ENST00000509101 A0A1B0GX51 115 aa8.02□□□□□ -1.13
CXCL1-202ENST00000509101 PSMB2P49721 201 aa8.02□□□□□ -1.13
CXCL1-202ENST00000509101 KRTAP10-10P60014 251 aa8.02□□□□□ -1.13
CXCL1-202ENST00000509101 SNCGO76070 127 aa8.01□□□□□ -1.13
CXCL1-202ENST00000509101 NDUFV3P56181 108 aaKnown RBP8.01□□□□□ -1.13
CXCL1-202ENST00000509101 SMIM6P0DI80 62 aa8□□□□□ -1.13
CXCL1-202ENST00000509101 LOC105371267A0A1B0GV96 52 aa7.98□□□□□ -1.13
CXCL1-202ENST00000509101 FABP2P12104 132 aa7.98□□□□□ -1.13
CXCL1-202ENST00000509101 SS18L2Q9UHA2 77 aa7.97□□□□□ -1.13
CXCL1-202ENST00000509101 H3BMG7 143 aa7.95□□□□□ -1.14
CXCL1-202ENST00000509101 COX6CP09669 75 aa7.95□□□□□ -1.14
CXCL1-202ENST00000509101 DSCR10P59022 87 aa7.95□□□□□ -1.14
CXCL1-202ENST00000509101 ORMDL1Q9P0S3 153 aa7.94□□□□□ -1.14
CXCL1-202ENST00000509101 KRTAP16-1A8MUX0 517 aa7.93□□□□□ -1.14
CXCL1-202ENST00000509101 DNAL4O96015 105 aa7.93□□□□□ -1.14
CXCL1-202ENST00000509101 GHRHP01286 108 aa7.92□□□□□ -1.14
CXCL1-202ENST00000509101 RBM12B-AS1Q9P1G2 102 aa7.92□□□□□ -1.14
CXCL1-202ENST00000509101 A0A1B0GV72 72 aa7.91□□□□□ -1.14
CXCL1-202ENST00000509101 SCGB1C2P0DMR2 95 aa7.91□□□□□ -1.14
CXCL1-202ENST00000509101 NAA38Q9BRA0 125 aaKnown RBP7.91□□□□□ -1.14
CXCL1-202ENST00000509101 LINC00846Q9NV44 126 aa7.91□□□□□ -1.14
CXCL1-202ENST00000509101 A0A1W2PNM2 257 aa7.9□□□□□ -1.14
CXCL1-202ENST00000509101 M0R143 59 aa7.9□□□□□ -1.14
CXCL1-202ENST00000509101 HRES1P13985 223 aa7.9□□□□□ -1.14
CXCL1-202ENST00000509101 TEN1Q86WV5 123 aa7.9□□□□□ -1.14
CXCL1-202ENST00000509101 MPLKIPQ8TAP9 179 aa7.9□□□□□ -1.14
CXCL1-202ENST00000509101 TRACP01848 142 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms