RNA–Protein interactions for RNA: ENST00000508597.1

HMGB1P44-201, Transcript of high mobility group box 1 pseudogene 44, humanhuman

BASIC

Gene HMGB1P44, Length 572 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P44-201ENST00000508597 KRTAP4-16G5E9R7 235 aaPredicted RBP3.33□□□□□ -1.88
HMGB1P44-201ENST00000508597 INAFM2P0DMQ5 153 aa3.33□□□□□ -1.88
HMGB1P44-201ENST00000508597 FAM19A1Q7Z5A9 133 aa3.33□□□□□ -1.88
HMGB1P44-201ENST00000508597 KRTAP13-1Q8IUC0 172 aa3.33□□□□□ -1.88
HMGB1P44-201ENST00000508597 PKHD1L1Q86WI1 4243 aa3.32□□□□□ -1.88
HMGB1P44-201ENST00000508597 PCLOQ9Y6V0 5065 aa3.32□□□□□ -1.88
HMGB1P44-201ENST00000508597 A0A1B0GWB2 263 aa3.32□□□□□ -1.88
HMGB1P44-201ENST00000508597 VAMP3Q15836 100 aa3.32□□□□□ -1.88
HMGB1P44-201ENST00000508597 Q6ZRX8 168 aa3.32□□□□□ -1.88
HMGB1P44-201ENST00000508597 PRO1854Q9UHT4 67 aa3.32□□□□□ -1.88
HMGB1P44-201ENST00000508597 KRTAP16-1A8MUX0 517 aa3.31□□□□□ -1.88
HMGB1P44-201ENST00000508597 SNCGO76070 127 aa3.31□□□□□ -1.88
HMGB1P44-201ENST00000508597 COX7BP24311 80 aa3.31□□□□□ -1.88
HMGB1P44-201ENST00000508597 RPL13AP40429 203 aaKnown RBP3.31□□□□□ -1.88
HMGB1P44-201ENST00000508597 FXYD2P54710 66 aa3.31□□□□□ -1.88
HMGB1P44-201ENST00000508597 NDUFV3P56181 108 aaKnown RBP3.31□□□□□ -1.88
HMGB1P44-201ENST00000508597 ELOF1P60002 83 aaKnown RBP3.31□□□□□ -1.88
HMGB1P44-201ENST00000508597 KRTAP10-5P60370 271 aa3.31□□□□□ -1.88
HMGB1P44-201ENST00000508597 C6orf99Q4VX62 202 aa3.31□□□□□ -1.88
HMGB1P44-201ENST00000508597 BVES-AS1Q5T3Y7 98 aa3.31□□□□□ -1.88
HMGB1P44-201ENST00000508597 Q8N377 158 aa3.31□□□□□ -1.88
HMGB1P44-201ENST00000508597 NHP2Q9NX24 153 aaKnown RBP3.31□□□□□ -1.88
HMGB1P44-201ENST00000508597 DHRS4-AS1Q9P1J3 65 aa3.31□□□□□ -1.88
HMGB1P44-201ENST00000508597 ZNF706Q9Y5V0 76 aaPredicted RBP3.31□□□□□ -1.88
HMGB1P44-201ENST00000508597 ABCA13Q86UQ4 5058 aa3.3□□□□□ -1.88
HMGB1P44-201ENST00000508597 H0YGX0 51 aa3.3□□□□□ -1.88
HMGB1P44-201ENST00000508597 SLC25A20O43772 301 aa3.3□□□□□ -1.88
HMGB1P44-201ENST00000508597 OXTP01178 125 aa3.3□□□□□ -1.88
HMGB1P44-201ENST00000508597 SMIM11BQ8TCY0 68 aa3.3□□□□□ -1.88
HMGB1P44-201ENST00000508597 A0A1B0GX51 115 aa3.29□□□□□ -1.88
HMGB1P44-201ENST00000508597 COX6CP09669 75 aa3.29□□□□□ -1.88
HMGB1P44-201ENST00000508597 PRLHP81277 87 aa3.29□□□□□ -1.88
HMGB1P44-201ENST00000508597 BATFQ16520 125 aa3.29□□□□□ -1.88
HMGB1P44-201ENST00000508597 Q1RN00 199 aa3.29□□□□□ -1.88
HMGB1P44-201ENST00000508597 SMCR5Q8TEV8 140 aa3.29□□□□□ -1.88
HMGB1P44-201ENST00000508597 HIGD2AQ9BW72 106 aa3.29□□□□□ -1.88
HMGB1P44-201ENST00000508597 FAM229BQ4G0N7 80 aa3.28□□□□□ -1.88
HMGB1P44-201ENST00000508597 LINC01600Q96MT4 127 aa3.28□□□□□ -1.88
HMGB1P44-201ENST00000508597 Q9BRP9 147 aa3.28□□□□□ -1.88
HMGB1P44-201ENST00000508597 MYCBP2O75592 4640 aa3.27□□□□□ -1.89
HMGB1P44-201ENST00000508597 DMBT1Q9UGM3 2413 aaPredicted RBP3.27□□□□□ -1.89
HMGB1P44-201ENST00000508597 H3BQ85 93 aa3.27□□□□□ -1.89
HMGB1P44-201ENST00000508597 H7C2G1 150 aa3.27□□□□□ -1.89
HMGB1P44-201ENST00000508597 OCIAD2Q56VL3 154 aa3.27□□□□□ -1.89
HMGB1P44-201ENST00000508597 LINC00575Q6W349 94 aa3.27□□□□□ -1.89
HMGB1P44-201ENST00000508597 SPRR4Q96PI1 79 aa3.27□□□□□ -1.89
HMGB1P44-201ENST00000508597 hADV29S1A0JD25 119 aa3.26□□□□□ -1.89
HMGB1P44-201ENST00000508597 K7ERU9 68 aa3.26□□□□□ -1.89
HMGB1P44-201ENST00000508597 TSPAN13O95857 204 aa3.26□□□□□ -1.89
HMGB1P44-201ENST00000508597 KRTAP1-4P0C5Y4 121 aa3.26□□□□□ -1.89
HMGB1P44-201ENST00000508597 CRYGAP11844 174 aa3.26□□□□□ -1.89
HMGB1P44-201ENST00000508597 SPRR1BP22528 89 aa3.26□□□□□ -1.89
HMGB1P44-201ENST00000508597 PSMB2P49721 201 aa3.26□□□□□ -1.89
HMGB1P44-201ENST00000508597 LINC00483Q53H64 154 aa3.26□□□□□ -1.89
HMGB1P44-201ENST00000508597 LYRM7Q5U5X0 104 aa3.26□□□□□ -1.89
HMGB1P44-201ENST00000508597 KRTAP5-1Q6L8H4 278 aa3.26□□□□□ -1.89
HMGB1P44-201ENST00000508597 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.26□□□□□ -1.89
HMGB1P44-201ENST00000508597 PPDPFLQ8WWR9 84 aa3.26□□□□□ -1.89
HMGB1P44-201ENST00000508597 FAT3Q8TDW7 4589 aa3.25□□□□□ -1.89
HMGB1P44-201ENST00000508597 TEX49A0A1B0GTD5 131 aa3.25□□□□□ -1.89
HMGB1P44-201ENST00000508597 K7ERJ3 54 aa3.25□□□□□ -1.89
HMGB1P44-201ENST00000508597 ERC2-IT1O76042 136 aa3.25□□□□□ -1.89
HMGB1P44-201ENST00000508597 LCE3CQ5T5A8 94 aa3.25□□□□□ -1.89
HMGB1P44-201ENST00000508597 LRP1Q07954 4544 aaKnown RBP3.24□□□□□ -1.89
HMGB1P44-201ENST00000508597 IGLV5-48A0A075B6I7 105 aa3.24□□□□□ -1.89
HMGB1P44-201ENST00000508597 SCGB1C2P0DMR2 95 aa3.24□□□□□ -1.89
HMGB1P44-201ENST00000508597 KRTAP10-8P60410 259 aa3.24□□□□□ -1.89
HMGB1P44-201ENST00000508597 GTF2H5Q6ZYL4 71 aa3.24□□□□□ -1.89
HMGB1P44-201ENST00000508597 SSBP3-AS1Q7Z2R9 100 aa3.24□□□□□ -1.89
HMGB1P44-201ENST00000508597 LAMTOR3Q9UHA4 124 aa3.24□□□□□ -1.89
HMGB1P44-201ENST00000508597 TRBV20-1A0A075B6N2 111 aa3.23□□□□□ -1.89
HMGB1P44-201ENST00000508597 DNAL4O96015 105 aa3.23□□□□□ -1.89
HMGB1P44-201ENST00000508597 TRACP01848 142 aa3.23□□□□□ -1.89
HMGB1P44-201ENST00000508597 Q6ZQY7 126 aa3.23□□□□□ -1.89
HMGB1P44-201ENST00000508597 TYMSOSQ8TAI1 123 aa3.23□□□□□ -1.89
HMGB1P44-201ENST00000508597 TNXBP22105 4242 aa3.23□□□□□ -1.89
HMGB1P44-201ENST00000508597 LST1O00453 97 aa3.22□□□□□ -1.89
HMGB1P44-201ENST00000508597 TAX1BP3O14907 124 aa3.22□□□□□ -1.89
HMGB1P44-201ENST00000508597 ST20-AS1Q8NBB2 130 aa3.22□□□□□ -1.89
HMGB1P44-201ENST00000508597 VPS25Q9BRG1 176 aa3.22□□□□□ -1.89
HMGB1P44-201ENST00000508597 F8WEM9 126 aa3.21□□□□□ -1.9
HMGB1P44-201ENST00000508597 TMEM256-PLSCR3K7ERE1 68 aa3.21□□□□□ -1.9
HMGB1P44-201ENST00000508597 MT1HL1P0DM35 61 aa3.21□□□□□ -1.9
HMGB1P44-201ENST00000508597 ATXN8Q156A1 80 aa3.21□□□□□ -1.9
HMGB1P44-201ENST00000508597 SPAG11AQ6PDA7 123 aa3.21□□□□□ -1.9
HMGB1P44-201ENST00000508597 DEFB105AQ8NG35 78 aa3.21□□□□□ -1.9
HMGB1P44-201ENST00000508597 ORMDL1Q9P0S3 153 aa3.21□□□□□ -1.9
HMGB1P44-201ENST00000508597 H3BUT2 72 aa3.2□□□□□ -1.9
HMGB1P44-201ENST00000508597 K7EP34 96 aa3.2□□□□□ -1.9
HMGB1P44-201ENST00000508597 FABP2P12104 132 aa3.2□□□□□ -1.9
HMGB1P44-201ENST00000508597 KRTAP5-9P26371 169 aa3.2□□□□□ -1.9
HMGB1P44-201ENST00000508597 KRTAP13-2Q52LG2 175 aa3.2□□□□□ -1.9
HMGB1P44-201ENST00000508597 Q6JHZ5 121 aa3.2□□□□□ -1.9
HMGB1P44-201ENST00000508597 CLEC2BQ92478 149 aa3.2□□□□□ -1.9
HMGB1P44-201ENST00000508597 ANAPC11Q9NYG5 84 aa3.2□□□□□ -1.9
HMGB1P44-201ENST00000508597 IGLV8-61A0A075B6I0 122 aa3.19□□□□□ -1.9
HMGB1P44-201ENST00000508597 A0A1W2PPM0 123 aa3.19□□□□□ -1.9
HMGB1P44-201ENST00000508597 J3QR89 54 aa3.19□□□□□ -1.9
HMGB1P44-201ENST00000508597 TCL1BO95988 128 aa3.19□□□□□ -1.9
HMGB1P44-201ENST00000508597 SCGB1A1P11684 91 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 120.2 ms