RNA–Protein interactions for RNA: ENST00000508531.1

PDLIM5-211, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-211ENST00000508531 CDC42SE1Q9NRR8 79 aa3.04□□□□□ -1.92
PDLIM5-211ENST00000508531 TRGV2A0A075B6R0 118 aa3.03□□□□□ -1.92
PDLIM5-211ENST00000508531 IGHV4-30-2A0A087WSY4 118 aa3.03□□□□□ -1.92
PDLIM5-211ENST00000508531 LOC101927531A0A1B0GV80 90 aa3.03□□□□□ -1.92
PDLIM5-211ENST00000508531 HCG22E2RYF7 251 aa3.03□□□□□ -1.92
PDLIM5-211ENST00000508531 PSPHP1O15172 72 aa3.03□□□□□ -1.92
PDLIM5-211ENST00000508531 INSP01308 110 aa3.03□□□□□ -1.92
PDLIM5-211ENST00000508531 Q6ZTI0 123 aa3.03□□□□□ -1.92
PDLIM5-211ENST00000508531 C5orf56Q8N8D9 126 aa3.03□□□□□ -1.92
PDLIM5-211ENST00000508531 TOMM7Q9P0U1 55 aa3.03□□□□□ -1.92
PDLIM5-211ENST00000508531 CELA1Q9UNI1 258 aa3.03□□□□□ -1.92
PDLIM5-211ENST00000508531 VWFP04275 2813 aa3.03□□□□□ -1.92
PDLIM5-211ENST00000508531 IGHV3OR16-9A0A0B4J2B5 98 aa3.02□□□□□ -1.93
PDLIM5-211ENST00000508531 A6NED7 52 aa3.02□□□□□ -1.93
PDLIM5-211ENST00000508531 A6NN06 94 aa3.02□□□□□ -1.93
PDLIM5-211ENST00000508531 C8orf87E5RJ46 101 aa3.02□□□□□ -1.93
PDLIM5-211ENST00000508531 IGKV4-1P06312 121 aa3.02□□□□□ -1.93
PDLIM5-211ENST00000508531 SPINK13Q1W4C9 94 aa3.02□□□□□ -1.93
PDLIM5-211ENST00000508531 C6orf99Q4VX62 202 aa3.02□□□□□ -1.93
PDLIM5-211ENST00000508531 Q5VV11 94 aa3.02□□□□□ -1.93
PDLIM5-211ENST00000508531 SPTSSBQ8NFR3 76 aa3.02□□□□□ -1.93
PDLIM5-211ENST00000508531 ZCCHC13Q8WW36 166 aaKnown RBP3.02□□□□□ -1.93
PDLIM5-211ENST00000508531 LINC00208Q96KT6 92 aa3.02□□□□□ -1.93
PDLIM5-211ENST00000508531 B9D2Q9BPU9 175 aa3.02□□□□□ -1.93
PDLIM5-211ENST00000508531 ARHGAP32A7KAX9 2087 aa3.01□□□□□ -1.93
PDLIM5-211ENST00000508531 G3V318 75 aa3.01□□□□□ -1.93
PDLIM5-211ENST00000508531 IGHV3-11P01762 117 aa3.01□□□□□ -1.93
PDLIM5-211ENST00000508531 PRM2P04554 102 aa3.01□□□□□ -1.93
PDLIM5-211ENST00000508531 FBXL19-AS1Q494R0 122 aa3.01□□□□□ -1.93
PDLIM5-211ENST00000508531 CASC2Q6XLA1 102 aa3.01□□□□□ -1.93
PDLIM5-211ENST00000508531 DEFB104AQ8WTQ1 72 aa3.01□□□□□ -1.93
PDLIM5-211ENST00000508531 HIGD2AQ9BW72 106 aa3.01□□□□□ -1.93
PDLIM5-211ENST00000508531 HYDINQ4G0P3 5121 aa3.01□□□□□ -1.93
PDLIM5-211ENST00000508531 A8MUN3 132 aa3□□□□□ -1.93
PDLIM5-211ENST00000508531 C16orf90A8MZG2 172 aa3□□□□□ -1.93
PDLIM5-211ENST00000508531 PRB2P02812 416 aaPredicted RBP3□□□□□ -1.93
PDLIM5-211ENST00000508531 CMC4P56277 68 aaPredicted RBP3□□□□□ -1.93
PDLIM5-211ENST00000508531 KIAA0087Q14695 138 aa3□□□□□ -1.93
PDLIM5-211ENST00000508531 Q6ZQY7 126 aa3□□□□□ -1.93
PDLIM5-211ENST00000508531 PRR15LQ9BU68 103 aa3□□□□□ -1.93
PDLIM5-211ENST00000508531 A0A096LNT2 108 aa2.99□□□□□ -1.93
PDLIM5-211ENST00000508531 IGHV3-73A0A0B4J1V6 119 aa2.99□□□□□ -1.93
PDLIM5-211ENST00000508531 IGLV6-57P01721 117 aa2.99□□□□□ -1.93
PDLIM5-211ENST00000508531 C9orf116Q5BN46 136 aaPredicted RBP2.99□□□□□ -1.93
PDLIM5-211ENST00000508531 KCNQ1DNQ9H478 68 aa2.99□□□□□ -1.93
PDLIM5-211ENST00000508531 IGKV3-7A0A075B6H7 116 aa2.98□□□□□ -1.93
PDLIM5-211ENST00000508531 PCLOQ9Y6V0 5065 aa2.97□□□□□ -1.93
PDLIM5-211ENST00000508531 LINC00959A0A1B0GUT2 108 aa2.97□□□□□ -1.93
PDLIM5-211ENST00000508531 LINC01554Q52M75 96 aa2.97□□□□□ -1.93
PDLIM5-211ENST00000508531 C11orf45Q8TAV5 145 aa2.97□□□□□ -1.93
PDLIM5-211ENST00000508531 WFDC10AQ9H1F0 79 aa2.97□□□□□ -1.93
PDLIM5-211ENST00000508531 RYR1P21817 5038 aa2.97□□□□□ -1.93
PDLIM5-211ENST00000508531 PLCE1Q9P212 2302 aa2.97□□□□□ -1.93
PDLIM5-211ENST00000508531 GVQW2A0A096LPI5 108 aaPredicted RBP2.96□□□□□ -1.94
PDLIM5-211ENST00000508531 TRGV1A0A0A0MS02 117 aa2.96□□□□□ -1.94
PDLIM5-211ENST00000508531 C3orf84H3BNL1 204 aa2.96□□□□□ -1.94
PDLIM5-211ENST00000508531 RTL8CO15255 209 aa2.96□□□□□ -1.94
PDLIM5-211ENST00000508531 HTN1P15515 57 aa2.96□□□□□ -1.94
PDLIM5-211ENST00000508531 DEFB1P60022 68 aa2.96□□□□□ -1.94
PDLIM5-211ENST00000508531 KRTAP5-5Q701N2 237 aaPredicted RBP2.96□□□□□ -1.94
PDLIM5-211ENST00000508531 SCXQ7RTU7 201 aa2.96□□□□□ -1.94
PDLIM5-211ENST00000508531 C16orf74Q96GX8 76 aa2.96□□□□□ -1.94
PDLIM5-211ENST00000508531 RYR2Q92736 4967 aa2.96□□□□□ -1.94
PDLIM5-211ENST00000508531 TENM2Q9NT68 2774 aa2.95□□□□□ -1.94
PDLIM5-211ENST00000508531 IGLV4-60A0A075B6I1 120 aa2.95□□□□□ -1.94
PDLIM5-211ENST00000508531 IGLV5-48A0A075B6I7 105 aa2.95□□□□□ -1.94
PDLIM5-211ENST00000508531 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.95□□□□□ -1.94
PDLIM5-211ENST00000508531 SPAG11BQ08648 103 aa2.95□□□□□ -1.94
PDLIM5-211ENST00000508531 LINC01006Q8NI28 216 aa2.95□□□□□ -1.94
PDLIM5-211ENST00000508531 LINC01558Q9Y6Z2 57 aa2.95□□□□□ -1.94
PDLIM5-211ENST00000508531 WNK2Q9Y3S1 2297 aa2.94□□□□□ -1.94
PDLIM5-211ENST00000508531 TRGV4A0A0C4DH28 118 aa2.94□□□□□ -1.94
PDLIM5-211ENST00000508531 LRCOL1A6NCL2 159 aa2.94□□□□□ -1.94
PDLIM5-211ENST00000508531 A6NDX4 124 aa2.94□□□□□ -1.94
PDLIM5-211ENST00000508531 PRB3Q04118 309 aaPredicted RBP2.94□□□□□ -1.94
PDLIM5-211ENST00000508531 DHRS4-AS1Q9P1J3 65 aa2.94□□□□□ -1.94
PDLIM5-211ENST00000508531 LYNX1G3V0Z9 82 aa2.93□□□□□ -1.94
PDLIM5-211ENST00000508531 LYNX1P0DP58 116 aa2.93□□□□□ -1.94
PDLIM5-211ENST00000508531 DEFB131AP59861 70 aa2.93□□□□□ -1.94
PDLIM5-211ENST00000508531 KPRPQ5T749 579 aaPredicted RBP2.93□□□□□ -1.94
PDLIM5-211ENST00000508531 RETNLBQ9BQ08 111 aa2.93□□□□□ -1.94
PDLIM5-211ENST00000508531 TENM3Q9P273 2699 aa2.93□□□□□ -1.94
PDLIM5-211ENST00000508531 M0R2N4 97 aa2.92□□□□□ -1.94
PDLIM5-211ENST00000508531 CDK2AP2O75956 126 aa2.92□□□□□ -1.94
PDLIM5-211ENST00000508531 CNBPP62633 177 aaKnown RBP2.92□□□□□ -1.94
PDLIM5-211ENST00000508531 MOBPQ13875 183 aa2.92□□□□□ -1.94
PDLIM5-211ENST00000508531 C11orf71Q6IPW1 123 aa2.92□□□□□ -1.94
PDLIM5-211ENST00000508531 SPRR4Q96PI1 79 aa2.92□□□□□ -1.94
PDLIM5-211ENST00000508531 IGKV3OR2-268A0A0C4DH90 116 aa2.91□□□□□ -1.94
PDLIM5-211ENST00000508531 RPL37AP8A6NKH3 93 aa2.91□□□□□ -1.94
PDLIM5-211ENST00000508531 H3BUX3 64 aa2.91□□□□□ -1.94
PDLIM5-211ENST00000508531 COA5Q86WW8 74 aa2.91□□□□□ -1.94
PDLIM5-211ENST00000508531 KRTAP11-1Q8IUC1 163 aa2.91□□□□□ -1.94
PDLIM5-211ENST00000508531 Q8N9L7 120 aa2.91□□□□□ -1.94
PDLIM5-211ENST00000508531 TP53AIP1Q9HCN2 124 aa2.91□□□□□ -1.94
PDLIM5-211ENST00000508531 H0Y9J4 135 aa2.9□□□□□ -1.95
PDLIM5-211ENST00000508531 H0Y9P7 68 aa2.9□□□□□ -1.95
PDLIM5-211ENST00000508531 PLAC8Q9NZF1 115 aa2.9□□□□□ -1.95
PDLIM5-211ENST00000508531 LINC00313P59037 77 aa2.89□□□□□ -1.95
PDLIM5-211ENST00000508531 PRR3P79522 188 aaKnown RBP2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms