RNA–Protein interactions for RNA: ENST00000508274.5

RAB28-205, Transcript of RAB28, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB28, Length 1,551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-205ENST00000508274 SEC61BP60468 96 aaKnown RBP7.88□□□□□ -1.15
RAB28-205ENST00000508274 Q6ZVH6 145 aa7.88□□□□□ -1.15
RAB28-205ENST00000508274 TRBV7-6A0A0J9YX20 115 aa7.87□□□□□ -1.15
RAB28-205ENST00000508274 A0A1B0GWB2 263 aa7.87□□□□□ -1.15
RAB28-205ENST00000508274 DLEU1O43261 78 aa7.87□□□□□ -1.15
RAB28-205ENST00000508274 LINC01547P58512 204 aaPredicted RBP7.87□□□□□ -1.15
RAB28-205ENST00000508274 COL5A1-AS1Q5SY13 56 aa7.87□□□□□ -1.15
RAB28-205ENST00000508274 TEX49A0A1B0GTD5 131 aa7.86□□□□□ -1.15
RAB28-205ENST00000508274 SMIM29Q86T20 159 aa7.86□□□□□ -1.15
RAB28-205ENST00000508274 LIMD2Q9BT23 127 aa7.86□□□□□ -1.15
RAB28-205ENST00000508274 KRTAP9-2Q9BYQ4 174 aa7.86□□□□□ -1.15
RAB28-205ENST00000508274 C2orf91Q6ZV80 131 aa7.85□□□□□ -1.15
RAB28-205ENST00000508274 A0A0G2JQZ4 141 aa7.84□□□□□ -1.15
RAB28-205ENST00000508274 BATFQ16520 125 aa7.84□□□□□ -1.15
RAB28-205ENST00000508274 SMIM11BQ8TCY0 68 aa7.84□□□□□ -1.15
RAB28-205ENST00000508274 IGLV5-48A0A075B6I7 105 aa7.84□□□□□ -1.15
RAB28-205ENST00000508274 H7C2G1 150 aa7.84□□□□□ -1.15
RAB28-205ENST00000508274 TRAV13-2A0A0B4J235 113 aa7.82□□□□□ -1.16
RAB28-205ENST00000508274 C9orf92A6NGG3 77 aa7.81□□□□□ -1.16
RAB28-205ENST00000508274 CD164Q04900 197 aa7.81□□□□□ -1.16
RAB28-205ENST00000508274 BVES-AS1Q5T3Y7 98 aa7.81□□□□□ -1.16
RAB28-205ENST00000508274 A4D1N5 150 aa7.8□□□□□ -1.16
RAB28-205ENST00000508274 HIGD1BQ9P298 99 aa7.8□□□□□ -1.16
RAB28-205ENST00000508274 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.79□□□□□ -1.16
RAB28-205ENST00000508274 HSD52Q0P140 79 aa7.77□□□□□ -1.17
RAB28-205ENST00000508274 NHP2Q9NX24 153 aaKnown RBP7.77□□□□□ -1.17
RAB28-205ENST00000508274 KRTAP4-12Q9BQ66 201 aa7.76□□□□□ -1.17
RAB28-205ENST00000508274 KRTAP9-6A0A140TA67 174 aa7.76□□□□□ -1.17
RAB28-205ENST00000508274 PCOTHQ58A44 107 aa7.76□□□□□ -1.17
RAB28-205ENST00000508274 C1orf195Q5TG92 126 aa7.76□□□□□ -1.17
RAB28-205ENST00000508274 Q5XG85 94 aa7.76□□□□□ -1.17
RAB28-205ENST00000508274 LINC00575Q6W349 94 aa7.75□□□□□ -1.17
RAB28-205ENST00000508274 TAX1BP3O14907 124 aa7.74□□□□□ -1.17
RAB28-205ENST00000508274 Q6ZQY7 126 aa7.73□□□□□ -1.17
RAB28-205ENST00000508274 VAMP3Q15836 100 aa7.72□□□□□ -1.17
RAB28-205ENST00000508274 hADV29S1A0JD25 119 aa7.71□□□□□ -1.17
RAB28-205ENST00000508274 IGLV8-61A0A075B6I0 122 aa7.71□□□□□ -1.18
RAB28-205ENST00000508274 F8WEM9 126 aa7.7□□□□□ -1.18
RAB28-205ENST00000508274 H3BS24 57 aa7.7□□□□□ -1.18
RAB28-205ENST00000508274 KRTAP19-2Q3LHN2 52 aa7.7□□□□□ -1.18
RAB28-205ENST00000508274 HIST1H4GQ99525 98 aa7.69□□□□□ -1.18
RAB28-205ENST00000508274 KRTAP19-1Q8IUB9 90 aa7.68□□□□□ -1.18
RAB28-205ENST00000508274 CEND1Q8N111 149 aa7.68□□□□□ -1.18
RAB28-205ENST00000508274 FXYD2P54710 66 aa7.67□□□□□ -1.18
RAB28-205ENST00000508274 UBE2V1Q13404 147 aa7.67□□□□□ -1.18
RAB28-205ENST00000508274 C9orf118A6NHY6 69 aa7.66□□□□□ -1.18
RAB28-205ENST00000508274 TCL1BO95988 128 aa7.66□□□□□ -1.18
RAB28-205ENST00000508274 IGFL1Q6UW32 110 aa7.66□□□□□ -1.18
RAB28-205ENST00000508274 CLEC2BQ92478 149 aa7.65□□□□□ -1.18
RAB28-205ENST00000508274 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.64□□□□□ -1.19
RAB28-205ENST00000508274 TRBV7-7A0A0K0K1E9 115 aa7.63□□□□□ -1.19
RAB28-205ENST00000508274 RPL37P61927 97 aaKnown RBP7.63□□□□□ -1.19
RAB28-205ENST00000508274 OCIAD2Q56VL3 154 aa7.63□□□□□ -1.19
RAB28-205ENST00000508274 Q6JHZ5 121 aa7.63□□□□□ -1.19
RAB28-205ENST00000508274 CFC1BP0CG36 223 aa7.62□□□□□ -1.19
RAB28-205ENST00000508274 CFC1P0CG37 223 aa7.62□□□□□ -1.19
RAB28-205ENST00000508274 MT1HP80294 61 aa7.62□□□□□ -1.19
RAB28-205ENST00000508274 H3BUT2 72 aa7.6□□□□□ -1.19
RAB28-205ENST00000508274 LCE3BQ5TA77 95 aa7.6□□□□□ -1.19
RAB28-205ENST00000508274 RAB37Q96AX2 223 aa7.59□□□□□ -1.19
RAB28-205ENST00000508274 A0A1W2PPM0 123 aa7.59□□□□□ -1.2
RAB28-205ENST00000508274 PPDPFLQ8WWR9 84 aa7.59□□□□□ -1.2
RAB28-205ENST00000508274 K7ERJ3 54 aa7.58□□□□□ -1.2
RAB28-205ENST00000508274 FAM218AQ96MZ4 157 aa7.58□□□□□ -1.2
RAB28-205ENST00000508274 A0A0B4J2C4 111 aa7.57□□□□□ -1.2
RAB28-205ENST00000508274 K7EP34 96 aa7.57□□□□□ -1.2
RAB28-205ENST00000508274 GTF2H5Q6ZYL4 71 aa7.57□□□□□ -1.2
RAB28-205ENST00000508274 NAA38Q9BRA0 125 aaKnown RBP7.56□□□□□ -1.2
RAB28-205ENST00000508274 FABP2P12104 132 aa7.55□□□□□ -1.2
RAB28-205ENST00000508274 FSIP2Q5CZC0 6907 aa7.54□□□□□ -1.2
RAB28-205ENST00000508274 OBSCN-AS1Q96MR7 158 aa7.54□□□□□ -1.2
RAB28-205ENST00000508274 SPCS1Q9Y6A9 102 aa7.54□□□□□ -1.2
RAB28-205ENST00000508274 H0YGX0 51 aa7.52□□□□□ -1.21
RAB28-205ENST00000508274 LST1O00453 97 aa7.52□□□□□ -1.21
RAB28-205ENST00000508274 NDUFV3P56181 108 aaKnown RBP7.5□□□□□ -1.21
RAB28-205ENST00000508274 FLGP20930 4061 aaPredicted RBP7.5□□□□□ -1.21
RAB28-205ENST00000508274 PRO1854Q9UHT4 67 aa7.5□□□□□ -1.21
RAB28-205ENST00000508274 SNCGO76070 127 aa7.49□□□□□ -1.21
RAB28-205ENST00000508274 Q6Q795 121 aa7.49□□□□□ -1.21
RAB28-205ENST00000508274 COX6B2Q6YFQ2 88 aa7.48□□□□□ -1.21
RAB28-205ENST00000508274 Q75L30 129 aa7.48□□□□□ -1.21
RAB28-205ENST00000508274 TRIAP1O43715 76 aa7.47□□□□□ -1.21
RAB28-205ENST00000508274 KRTAP10-6P60371 365 aaPredicted RBP7.47□□□□□ -1.21
RAB28-205ENST00000508274 TEN1Q86WV5 123 aa7.47□□□□□ -1.21
RAB28-205ENST00000508274 A0A087WSZ3 146 aa7.46□□□□□ -1.21
RAB28-205ENST00000508274 H3BMG7 143 aa7.46□□□□□ -1.21
RAB28-205ENST00000508274 LYRM7Q5U5X0 104 aa7.46□□□□□ -1.21
RAB28-205ENST00000508274 SS18L2Q9UHA2 77 aa7.46□□□□□ -1.21
RAB28-205ENST00000508274 Q96NJ1 140 aa7.46□□□□□ -1.22
RAB28-205ENST00000508274 A0A1B0GX51 115 aa7.45□□□□□ -1.22
RAB28-205ENST00000508274 ATP11AUNQ6ZP68 121 aa7.45□□□□□ -1.22
RAB28-205ENST00000508274 M0R2T5 61 aa7.44□□□□□ -1.22
RAB28-205ENST00000508274 F8W1H4 67 aa7.43□□□□□ -1.22
RAB28-205ENST00000508274 KRTAP9-9Q9BYP9 154 aa7.43□□□□□ -1.22
RAB28-205ENST00000508274 KRTAP9-4Q9BYQ2 154 aa7.43□□□□□ -1.22
RAB28-205ENST00000508274 A0A1B0GV72 72 aa7.42□□□□□ -1.22
RAB28-205ENST00000508274 A0A1W2PNM2 257 aa7.42□□□□□ -1.22
RAB28-205ENST00000508274 TRBV20-1A0A075B6N2 111 aa7.42□□□□□ -1.22
RAB28-205ENST00000508274 PRO0461Q9UI25 63 aa7.42□□□□□ -1.22
RAB28-205ENST00000508274 KRTAP19-4Q3LI73 84 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms