RNA–Protein interactions for RNA: ENST00000508258.1

SMN2-208, Transcript of survival of motor neuron 2, centromeric, humanhuman

TSL 5

Gene SMN2, Length 211 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-208ENST00000508258 H0YGG7 62 aa-0.25□□□□□ -2.45
SMN2-208ENST00000508258 SMIM13P0DJ93 91 aa-0.25□□□□□ -2.45
SMN2-208ENST00000508258 RRBP1Q9P2E9 1410 aaKnown RBP-0.25□□□□□ -2.45
SMN2-208ENST00000508258 MAP3K1Q13233 1512 aa-0.25□□□□□ -2.45
SMN2-208ENST00000508258 RNF17Q9BXT8 1623 aaKnown RBP-0.25□□□□□ -2.45
SMN2-208ENST00000508258 KNL1Q8NG31 2342 aa-0.25□□□□□ -2.45
SMN2-208ENST00000508258 SETD2Q9BYW2 2564 aaPredicted RBP-0.26□□□□□ -2.45
SMN2-208ENST00000508258 ANKRD50Q9ULJ7 1429 aa-0.26□□□□□ -2.45
SMN2-208ENST00000508258 A0A087WXM4 84 aa-0.26□□□□□ -2.45
SMN2-208ENST00000508258 LYNX1G3V0Z9 82 aa-0.26□□□□□ -2.45
SMN2-208ENST00000508258 LYSTQ99698 3801 aa-0.26□□□□□ -2.45
SMN2-208ENST00000508258 TNRC18O15417 2968 aaPredicted RBP-0.27□□□□□ -2.45
SMN2-208ENST00000508258 THOC2Q8NI27 1593 aaKnown RBP-0.27□□□□□ -2.45
SMN2-208ENST00000508258 ANKARQ7Z5J8 1434 aa-0.27□□□□□ -2.45
SMN2-208ENST00000508258 C18orf32Q8TCD1 76 aa-0.27□□□□□ -2.45
SMN2-208ENST00000508258 ITSN1Q15811 1721 aa-0.27□□□□□ -2.45
SMN2-208ENST00000508258 TJP1Q07157 1748 aa-0.28□□□□□ -2.45
SMN2-208ENST00000508258 PARP4Q9UKK3 1724 aaKnown RBP-0.28□□□□□ -2.45
SMN2-208ENST00000508258 CUBNO60494 3623 aa-0.28□□□□□ -2.45
SMN2-208ENST00000508258 ZC3H13Q5T200 1668 aaKnown RBP-0.28□□□□□ -2.45
SMN2-208ENST00000508258 LAMA5O15230 3695 aa-0.28□□□□□ -2.45
SMN2-208ENST00000508258 KMT2CQ8NEZ4 4911 aaKnown RBP-0.29□□□□□ -2.46
SMN2-208ENST00000508258 DEFB131BA0A096LNP1 70 aa-0.29□□□□□ -2.46
SMN2-208ENST00000508258 DEFA5Q01523 94 aa-0.29□□□□□ -2.46
SMN2-208ENST00000508258 SPTBN4Q9H254 2564 aa-0.29□□□□□ -2.46
SMN2-208ENST00000508258 NBEAL1Q6ZS30 2694 aa-0.3□□□□□ -2.46
SMN2-208ENST00000508258 DEFB130BP0DP73 79 aa-0.3□□□□□ -2.46
SMN2-208ENST00000508258 DEFB130AP0DP74 79 aa-0.3□□□□□ -2.46
SMN2-208ENST00000508258 KCNQ1DNQ9H478 68 aa-0.3□□□□□ -2.46
SMN2-208ENST00000508258 LMTK2Q8IWU2 1503 aa-0.3□□□□□ -2.46
SMN2-208ENST00000508258 PRRC2CQ9Y520 2896 aaKnown RBP-0.3□□□□□ -2.46
SMN2-208ENST00000508258 RALGAPBQ86X10 1494 aa-0.3□□□□□ -2.46
SMN2-208ENST00000508258 LRRIQ1Q96JM4 1722 aa-0.3□□□□□ -2.46
SMN2-208ENST00000508258 HFM1A2PYH4 1435 aa-0.3□□□□□ -2.46
SMN2-208ENST00000508258 NHSQ6T4R5 1651 aa-0.3□□□□□ -2.46
SMN2-208ENST00000508258 STAB2Q8WWQ8 2551 aa-0.31□□□□□ -2.46
SMN2-208ENST00000508258 INO80Q9ULG1 1556 aaPredicted RBP-0.31□□□□□ -2.46
SMN2-208ENST00000508258 DNAH9Q9NYC9 4486 aa-0.31□□□□□ -2.46
SMN2-208ENST00000508258 MT1AP04731 61 aa-0.31□□□□□ -2.46
SMN2-208ENST00000508258 SONP18583 2426 aaKnown RBP-0.31□□□□□ -2.46
SMN2-208ENST00000508258 MYO5CQ9NQX4 1742 aa-0.31□□□□□ -2.46
SMN2-208ENST00000508258 PDE4DIPQ5VU43 2346 aa-0.31□□□□□ -2.46
SMN2-208ENST00000508258 IQGAP3Q86VI3 1631 aa-0.31□□□□□ -2.46
SMN2-208ENST00000508258 HECTD1Q9ULT8 2610 aa-0.32□□□□□ -2.46
SMN2-208ENST00000508258 NRAPQ86VF7 1730 aa-0.32□□□□□ -2.46
SMN2-208ENST00000508258 HTTP42858 3142 aa-0.32□□□□□ -2.46
SMN2-208ENST00000508258 C9orf92A6NGG3 77 aa-0.32□□□□□ -2.46
SMN2-208ENST00000508258 MRPL33O75394 65 aaKnown RBP-0.32□□□□□ -2.46
SMN2-208ENST00000508258 IAPPP10997 89 aa-0.32□□□□□ -2.46
SMN2-208ENST00000508258 PRLHP81277 87 aa-0.32□□□□□ -2.46
SMN2-208ENST00000508258 SPRR2FQ96RM1 72 aa-0.32□□□□□ -2.46
SMN2-208ENST00000508258 ANK3Q12955 4377 aaKnown RBP-0.32□□□□□ -2.46
SMN2-208ENST00000508258 TGP01266 2768 aa-0.32□□□□□ -2.46
SMN2-208ENST00000508258 NBASA2RRP1 2371 aa-0.32□□□□□ -2.46
SMN2-208ENST00000508258 VPS13BQ7Z7G8 4022 aa-0.32□□□□□ -2.46
SMN2-208ENST00000508258 DSPP15924 2871 aaKnown RBP-0.32□□□□□ -2.46
SMN2-208ENST00000508258 CREBBPQ92793 2442 aa-0.33□□□□□ -2.46
SMN2-208ENST00000508258 APOBP04114 4563 aaKnown RBP-0.33□□□□□ -2.46
SMN2-208ENST00000508258 KIAA0586Q9BVV6 1533 aa-0.33□□□□□ -2.46
SMN2-208ENST00000508258 DNAH6Q9C0G6 4158 aa-0.33□□□□□ -2.46
SMN2-208ENST00000508258 H3BNG1 76 aa-0.33□□□□□ -2.46
SMN2-208ENST00000508258 KRTAP19-8Q3LI54 63 aa-0.33□□□□□ -2.46
SMN2-208ENST00000508258 UBL5Q9BZL1 73 aa-0.33□□□□□ -2.46
SMN2-208ENST00000508258 CDC42BPGQ6DT37 1551 aa-0.33□□□□□ -2.46
SMN2-208ENST00000508258 PKHD1L1Q86WI1 4243 aa-0.33□□□□□ -2.46
SMN2-208ENST00000508258 NF1P21359 2839 aa-0.33□□□□□ -2.46
SMN2-208ENST00000508258 ITSN2Q9NZM3 1697 aa-0.33□□□□□ -2.46
SMN2-208ENST00000508258 PCLOQ9Y6V0 5065 aa-0.34□□□□□ -2.46
SMN2-208ENST00000508258 ZZEF1O43149 2961 aa-0.34□□□□□ -2.46
SMN2-208ENST00000508258 DIP2AQ14689 1571 aa-0.34□□□□□ -2.46
SMN2-208ENST00000508258 ENHOQ6UWT2 76 aa-0.34□□□□□ -2.46
SMN2-208ENST00000508258 AKAP9Q99996 3911 aa-0.35□□□□□ -2.47
SMN2-208ENST00000508258 VPS13DQ5THJ4 4388 aa-0.35□□□□□ -2.47
SMN2-208ENST00000508258 NBPF19A0A087WUL8 3843 aa-0.35□□□□□ -2.47
SMN2-208ENST00000508258 H3BVH4 76 aa-0.35□□□□□ -2.47
SMN2-208ENST00000508258 CRIP1P50238 77 aa-0.35□□□□□ -2.47
SMN2-208ENST00000508258 DSTQ03001 7570 aaKnown RBP-0.35□□□□□ -2.47
SMN2-208ENST00000508258 HERC1Q15751 4861 aa-0.35□□□□□ -2.47
SMN2-208ENST00000508258 UGGT2Q9NYU1 1516 aa-0.35□□□□□ -2.47
SMN2-208ENST00000508258 DMXL1Q9Y485 3027 aa-0.35□□□□□ -2.47
SMN2-208ENST00000508258 STARD9Q9P2P6 4700 aa-0.36□□□□□ -2.47
SMN2-208ENST00000508258 ABCA9Q8IUA7 1624 aa-0.36□□□□□ -2.47
SMN2-208ENST00000508258 C3P01024 1663 aa-0.37□□□□□ -2.47
SMN2-208ENST00000508258 MXRA5Q9NR99 2828 aa-0.37□□□□□ -2.47
SMN2-208ENST00000508258 ETDCA0A1B0GVM5 59 aa-0.37□□□□□ -2.47
SMN2-208ENST00000508258 DEFB106AQ8N104 65 aa-0.37□□□□□ -2.47
SMN2-208ENST00000508258 S4R3F8 94 aa-0.37□□□□□ -2.47
SMN2-208ENST00000508258 ASXL1Q8IXJ9 1541 aa-0.38□□□□□ -2.47
SMN2-208ENST00000508258 DUOX2Q9NRD8 1548 aa-0.38□□□□□ -2.47
SMN2-208ENST00000508258 DNAH3Q8TD57 4116 aa-0.38□□□□□ -2.47
SMN2-208ENST00000508258 KIF1AQ12756 1690 aa-0.38□□□□□ -2.47
SMN2-208ENST00000508258 ANKRD36CQ5JPF3 1778 aa-0.38□□□□□ -2.47
SMN2-208ENST00000508258 SACSQ9NZJ4 4579 aa-0.38□□□□□ -2.47
SMN2-208ENST00000508258 BPTFQ12830 3046 aa-0.38□□□□□ -2.47
SMN2-208ENST00000508258 HIVEP1P15822 2718 aa-0.38□□□□□ -2.47
SMN2-208ENST00000508258 TEP1Q99973 2627 aaKnown RBP-0.38□□□□□ -2.47
SMN2-208ENST00000508258 MACF1Q9UPN3 7388 aaKnown RBP-0.39□□□□□ -2.47
SMN2-208ENST00000508258 ATXN8Q156A1 80 aa-0.39□□□□□ -2.47
SMN2-208ENST00000508258 DEFB114Q30KQ6 69 aa-0.39□□□□□ -2.47
SMN2-208ENST00000508258 DNAH11Q96DT5 4516 aa-0.39□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms