RNA–Protein interactions for RNA: ENST00000508170.5

PDGFRA-206, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene PDGFRA, Length 2,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-206ENST00000508170 NDUFA4O00483 81 aa4.23□□□□□ -1.73
PDGFRA-206ENST00000508170 SLPIP03973 132 aa4.23□□□□□ -1.73
PDGFRA-206ENST00000508170 OBSCN-AS1Q96MR7 158 aa4.23□□□□□ -1.73
PDGFRA-206ENST00000508170 SPG11Q96JI7 2443 aa4.23□□□□□ -1.73
PDGFRA-206ENST00000508170 DOPEY2Q9Y3R5 2298 aa4.23□□□□□ -1.73
PDGFRA-206ENST00000508170 PRRC2AP48634 2157 aaKnown RBP4.23□□□□□ -1.73
PDGFRA-206ENST00000508170 IGKV2-29A2NJV5 120 aaPredicted RBP4.23□□□□□ -1.73
PDGFRA-206ENST00000508170 KRTAP10-2P60368 255 aa4.23□□□□□ -1.73
PDGFRA-206ENST00000508170 TRGV4A0A0C4DH28 118 aa4.22□□□□□ -1.73
PDGFRA-206ENST00000508170 H3BUA1 57 aa4.22□□□□□ -1.73
PDGFRA-206ENST00000508170 M0QY20 66 aa4.22□□□□□ -1.73
PDGFRA-206ENST00000508170 USMG5Q96IX5 58 aa4.22□□□□□ -1.73
PDGFRA-206ENST00000508170 UBL5Q9BZL1 73 aa4.22□□□□□ -1.73
PDGFRA-206ENST00000508170 USP9YO00507 2555 aaPredicted RBP4.22□□□□□ -1.73
PDGFRA-206ENST00000508170 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.22□□□□□ -1.73
PDGFRA-206ENST00000508170 A0A1W2PNN7 141 aa4.22□□□□□ -1.73
PDGFRA-206ENST00000508170 RPL37AP61513 92 aaKnown RBP4.22□□□□□ -1.73
PDGFRA-206ENST00000508170 LINC00304Q8N9R0 145 aa4.22□□□□□ -1.73
PDGFRA-206ENST00000508170 ZCCHC13Q8WW36 166 aaKnown RBP4.22□□□□□ -1.73
PDGFRA-206ENST00000508170 BRD3OSQ6XYD6 125 aa4.21□□□□□ -1.74
PDGFRA-206ENST00000508170 LINC00308Q8TCZ7 52 aa4.21□□□□□ -1.74
PDGFRA-206ENST00000508170 SETD2Q9BYW2 2564 aaPredicted RBP4.2□□□□□ -1.74
PDGFRA-206ENST00000508170 CSPG4Q6UVK1 2322 aa4.2□□□□□ -1.74
PDGFRA-206ENST00000508170 KRTAP29-1A8MX34 341 aaPredicted RBP4.2□□□□□ -1.74
PDGFRA-206ENST00000508170 NDUFA1O15239 70 aa4.2□□□□□ -1.74
PDGFRA-206ENST00000508170 ZNF625Q96I27 306 aaPredicted RBP4.2□□□□□ -1.74
PDGFRA-206ENST00000508170 LINC00472Q9H8W2 130 aa4.2□□□□□ -1.74
PDGFRA-206ENST00000508170 H3BUX3 64 aa4.19□□□□□ -1.74
PDGFRA-206ENST00000508170 Q96NJ1 140 aa4.19□□□□□ -1.74
PDGFRA-206ENST00000508170 RHPN1-AS1Q9BWJ2 59 aa4.19□□□□□ -1.74
PDGFRA-206ENST00000508170 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.18□□□□□ -1.74
PDGFRA-206ENST00000508170 Q8N3U1 123 aa4.18□□□□□ -1.74
PDGFRA-206ENST00000508170 CCL19Q99731 98 aa4.18□□□□□ -1.74
PDGFRA-206ENST00000508170 ITPR2Q14571 2701 aa4.18□□□□□ -1.74
PDGFRA-206ENST00000508170 CDKN2A-AS1Q9UH64 79 aa4.18□□□□□ -1.74
PDGFRA-206ENST00000508170 TRGV1A0A0A0MS02 117 aa4.17□□□□□ -1.74
PDGFRA-206ENST00000508170 IGKV4-1P06312 121 aa4.17□□□□□ -1.74
PDGFRA-206ENST00000508170 ZANQ9Y493 2812 aa4.16□□□□□ -1.74
PDGFRA-206ENST00000508170 MXRA5Q9NR99 2828 aa4.16□□□□□ -1.74
PDGFRA-206ENST00000508170 SORL1Q92673 2214 aa4.16□□□□□ -1.74
PDGFRA-206ENST00000508170 DEFB112Q30KQ8 113 aa4.15□□□□□ -1.74
PDGFRA-206ENST00000508170 APCP25054 2843 aa4.15□□□□□ -1.74
PDGFRA-206ENST00000508170 HTN1P15515 57 aa4.15□□□□□ -1.75
PDGFRA-206ENST00000508170 SPINK13Q1W4C9 94 aa4.15□□□□□ -1.75
PDGFRA-206ENST00000508170 DNHD1Q96M86 4753 aa4.15□□□□□ -1.75
PDGFRA-206ENST00000508170 NCR3O14931 201 aa4.14□□□□□ -1.75
PDGFRA-206ENST00000508170 COX6A2Q02221 97 aa4.14□□□□□ -1.75
PDGFRA-206ENST00000508170 LINC00959A0A1B0GUT2 108 aa4.14□□□□□ -1.75
PDGFRA-206ENST00000508170 TRGV2A0A075B6R0 118 aa4.13□□□□□ -1.75
PDGFRA-206ENST00000508170 CCDC168Q8NDH2 2452 aa4.13□□□□□ -1.75
PDGFRA-206ENST00000508170 C10orf99Q6UWK7 81 aa4.13□□□□□ -1.75
PDGFRA-206ENST00000508170 ZNF469Q96JG9 3925 aaPredicted RBP4.12□□□□□ -1.75
PDGFRA-206ENST00000508170 H0YGX0 51 aa4.12□□□□□ -1.75
PDGFRA-206ENST00000508170 SMIM11BQ8TCY0 68 aa4.12□□□□□ -1.75
PDGFRA-206ENST00000508170 A0A096LNT2 108 aa4.11□□□□□ -1.75
PDGFRA-206ENST00000508170 KRTAP10-9P60411 292 aa4.11□□□□□ -1.75
PDGFRA-206ENST00000508170 COX17Q14061 63 aa4.11□□□□□ -1.75
PDGFRA-206ENST00000508170 FN1P02751 2386 aaKnown RBP4.11□□□□□ -1.75
PDGFRA-206ENST00000508170 LOC110117498A0A087WWA1 95 aa4.1□□□□□ -1.75
PDGFRA-206ENST00000508170 NF1P21359 2839 aa4.1□□□□□ -1.75
PDGFRA-206ENST00000508170 F8P00451 2351 aa4.1□□□□□ -1.75
PDGFRA-206ENST00000508170 IGKV2-28A0A075B6P5 120 aa4.1□□□□□ -1.75
PDGFRA-206ENST00000508170 IGKV2D-28P01615 120 aa4.1□□□□□ -1.75
PDGFRA-206ENST00000508170 IGLV6-57P01721 117 aa4.1□□□□□ -1.75
PDGFRA-206ENST00000508170 LINC00158P58513 81 aa4.1□□□□□ -1.75
PDGFRA-206ENST00000508170 PDZD2O15018 2839 aa4.09□□□□□ -1.75
PDGFRA-206ENST00000508170 A8MTW9 85 aa4.09□□□□□ -1.75
PDGFRA-206ENST00000508170 KRTAP11-1Q8IUC1 163 aa4.09□□□□□ -1.75
PDGFRA-206ENST00000508170 TOMM7Q9P0U1 55 aa4.09□□□□□ -1.75
PDGFRA-206ENST00000508170 AKAP9Q99996 3911 aa4.09□□□□□ -1.76
PDGFRA-206ENST00000508170 ACANP16112 2415 aa4.07□□□□□ -1.76
PDGFRA-206ENST00000508170 DEFB131AP59861 70 aa4.07□□□□□ -1.76
PDGFRA-206ENST00000508170 MTORP42345 2549 aa4.07□□□□□ -1.76
PDGFRA-206ENST00000508170 TLN2Q9Y4G6 2542 aa4.07□□□□□ -1.76
PDGFRA-206ENST00000508170 COA5Q86WW8 74 aa4.06□□□□□ -1.76
PDGFRA-206ENST00000508170 OTOGQ6ZRI0 2925 aa4.06□□□□□ -1.76
PDGFRA-206ENST00000508170 ACYP2P14621 99 aa4.05□□□□□ -1.76
PDGFRA-206ENST00000508170 DEFB136Q30KP8 78 aa4.05□□□□□ -1.76
PDGFRA-206ENST00000508170 LCE5AQ5TCM9 118 aa4.05□□□□□ -1.76
PDGFRA-206ENST00000508170 Q8N9L7 120 aa4.05□□□□□ -1.76
PDGFRA-206ENST00000508170 NBEAL1Q6ZS30 2694 aa4.05□□□□□ -1.76
PDGFRA-206ENST00000508170 A0A1B0GU69 56 aa4.04□□□□□ -1.76
PDGFRA-206ENST00000508170 HAMPP81172 84 aa4.04□□□□□ -1.76
PDGFRA-206ENST00000508170 ATRQ13535 2644 aa4.04□□□□□ -1.76
PDGFRA-206ENST00000508170 INE1O15225 51 aa4.03□□□□□ -1.76
PDGFRA-206ENST00000508170 DSCR10P59022 87 aa4.03□□□□□ -1.76
PDGFRA-206ENST00000508170 DEFB114Q30KQ6 69 aa4.03□□□□□ -1.76
PDGFRA-206ENST00000508170 FLNAP21333 2647 aaKnown RBP4.03□□□□□ -1.76
PDGFRA-206ENST00000508170 NIPBLQ6KC79 2804 aaeCLIP4.03□□□□□ -1.76
PDGFRA-206ENST00000508170 WNK1Q9H4A3 2382 aa4.03□□□□□ -1.76
PDGFRA-206ENST00000508170 SONP18583 2426 aaKnown RBP4.03□□□□□ -1.77
PDGFRA-206ENST00000508170 CUBNO60494 3623 aa4.02□□□□□ -1.77
PDGFRA-206ENST00000508170 FBN1P35555 2871 aaKnown RBP4.02□□□□□ -1.77
PDGFRA-206ENST00000508170 KRTAP10-8P60410 259 aa4.02□□□□□ -1.77
PDGFRA-206ENST00000508170 KRTAP4-8Q9BYQ9 185 aa4.02□□□□□ -1.77
PDGFRA-206ENST00000508170 NOTCH3Q9UM47 2321 aa4.02□□□□□ -1.77
PDGFRA-206ENST00000508170 HIVEP1P15822 2718 aa4.01□□□□□ -1.77
PDGFRA-206ENST00000508170 JMJD1CQ15652 2540 aa4.01□□□□□ -1.77
PDGFRA-206ENST00000508170 IGKV2D-24A0A075B6R9 120 aa4.01□□□□□ -1.77
PDGFRA-206ENST00000508170 KRTAP1-3Q8IUG1 177 aa4.01□□□□□ -1.77
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