RNA–Protein interactions for RNA: ENST00000508086.1

CCSER1-206, Transcript of coiled-coil serine rich protein 1, humanhuman

TSL 3

Gene CCSER1, Length 518 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1-206ENST00000508086 C3P01024 1663 aa0.26□□□□□ -2.37
CCSER1-206ENST00000508086 SETXQ7Z333 2677 aaKnown RBP0.25□□□□□ -2.37
CCSER1-206ENST00000508086 WNK1Q9H4A3 2382 aa0.25□□□□□ -2.37
CCSER1-206ENST00000508086 CCDC180Q9P1Z9 1646 aa0.25□□□□□ -2.37
CCSER1-206ENST00000508086 HMCN2Q8NDA2 5059 aa0.25□□□□□ -2.37
CCSER1-206ENST00000508086 DMBT1Q9UGM3 2413 aaPredicted RBP0.25□□□□□ -2.37
CCSER1-206ENST00000508086 MRPL33O75394 65 aaKnown RBP0.24□□□□□ -2.37
CCSER1-206ENST00000508086 PDE4DIPQ5VU43 2346 aa0.23□□□□□ -2.37
CCSER1-206ENST00000508086 ERICH3Q5RHP9 1530 aa0.23□□□□□ -2.37
CCSER1-206ENST00000508086 COL7A1Q02388 2944 aa0.22□□□□□ -2.37
CCSER1-206ENST00000508086 A0A087WWC5 75 aa0.22□□□□□ -2.37
CCSER1-206ENST00000508086 DEFB114Q30KQ6 69 aa0.22□□□□□ -2.37
CCSER1-206ENST00000508086 MAP1BP46821 2468 aaKnown RBP0.21□□□□□ -2.38
CCSER1-206ENST00000508086 SMIM31A0A1B0GVY4 71 aa0.21□□□□□ -2.38
CCSER1-206ENST00000508086 DEFB135Q30KP9 77 aa0.21□□□□□ -2.38
CCSER1-206ENST00000508086 DCHS2Q6V1P9 2916 aa0.21□□□□□ -2.38
CCSER1-206ENST00000508086 SPRR2BP35325 72 aa0.2□□□□□ -2.38
CCSER1-206ENST00000508086 APC2O95996 2303 aa0.2□□□□□ -2.38
CCSER1-206ENST00000508086 ABCA6Q8N139 1617 aa0.2□□□□□ -2.38
CCSER1-206ENST00000508086 AKAP13Q12802 2813 aa0.19□□□□□ -2.38
CCSER1-206ENST00000508086 HSPG2P98160 4391 aa0.19□□□□□ -2.38
CCSER1-206ENST00000508086 FLNCQ14315 2725 aa0.19□□□□□ -2.38
CCSER1-206ENST00000508086 DSPP15924 2871 aaKnown RBP0.19□□□□□ -2.38
CCSER1-206ENST00000508086 CRIP1P50238 77 aa0.19□□□□□ -2.38
CCSER1-206ENST00000508086 HECTD4Q9Y4D8 3996 aa0.18□□□□□ -2.38
CCSER1-206ENST00000508086 ETDCA0A1B0GVM5 59 aa0.18□□□□□ -2.38
CCSER1-206ENST00000508086 GNG13Q9P2W3 67 aa0.18□□□□□ -2.38
CCSER1-206ENST00000508086 ACANP16112 2415 aa0.18□□□□□ -2.38
CCSER1-206ENST00000508086 ABCC6O95255 1503 aa0.18□□□□□ -2.38
CCSER1-206ENST00000508086 KIAA0586Q9BVV6 1533 aa0.17□□□□□ -2.38
CCSER1-206ENST00000508086 PRRC2CQ9Y520 2896 aaKnown RBP0.16□□□□□ -2.38
CCSER1-206ENST00000508086 LY75O60449 1722 aa0.15□□□□□ -2.39
CCSER1-206ENST00000508086 GLI2P10070 1586 aa0.15□□□□□ -2.39
CCSER1-206ENST00000508086 NSD1Q96L73 2696 aaPredicted RBP0.14□□□□□ -2.39
CCSER1-206ENST00000508086 TIAM1Q13009 1591 aa0.14□□□□□ -2.39
CCSER1-206ENST00000508086 PCNX1Q96RV3 2341 aa0.14□□□□□ -2.39
CCSER1-206ENST00000508086 ITSN2Q9NZM3 1697 aa0.14□□□□□ -2.39
CCSER1-206ENST00000508086 FLNBO75369 2602 aaKnown RBP0.13□□□□□ -2.39
CCSER1-206ENST00000508086 DEFB130BP0DP73 79 aa0.13□□□□□ -2.39
CCSER1-206ENST00000508086 DEFB130AP0DP74 79 aa0.13□□□□□ -2.39
CCSER1-206ENST00000508086 GPR98Q8WXG9 6306 aa0.13□□□□□ -2.39
CCSER1-206ENST00000508086 COL6A3P12111 3177 aa0.13□□□□□ -2.39
CCSER1-206ENST00000508086 FLNAP21333 2647 aaKnown RBP0.12□□□□□ -2.39
CCSER1-206ENST00000508086 LINC01549A6NIU2 74 aa0.12□□□□□ -2.39
CCSER1-206ENST00000508086 TNRC18O15417 2968 aaPredicted RBP0.12□□□□□ -2.39
CCSER1-206ENST00000508086 IAPPP10997 89 aa0.11□□□□□ -2.39
CCSER1-206ENST00000508086 HECTD1Q9ULT8 2610 aa0.1□□□□□ -2.39
CCSER1-206ENST00000508086 NBASA2RRP1 2371 aa0.09□□□□□ -2.39
CCSER1-206ENST00000508086 LRP2P98164 4655 aa0.09□□□□□ -2.4
CCSER1-206ENST00000508086 TENM2Q9NT68 2774 aa0.09□□□□□ -2.4
CCSER1-206ENST00000508086 LRP1BQ9NZR2 4599 aa0.09□□□□□ -2.4
CCSER1-206ENST00000508086 ALS2Q96Q42 1657 aa0.08□□□□□ -2.4
CCSER1-206ENST00000508086 KIF1AQ12756 1690 aa0.08□□□□□ -2.4
CCSER1-206ENST00000508086 PKD1P98161 4303 aa0.07□□□□□ -2.4
CCSER1-206ENST00000508086 ABCA10Q8WWZ4 1543 aa0.07□□□□□ -2.4
CCSER1-206ENST00000508086 LYSTQ99698 3801 aa0.07□□□□□ -2.4
CCSER1-206ENST00000508086 CREBBPQ92793 2442 aa0.05□□□□□ -2.4
CCSER1-206ENST00000508086 MAST1Q9Y2H9 1570 aa0.04□□□□□ -2.4
CCSER1-206ENST00000508086 H0YGG7 62 aa0.04□□□□□ -2.4
CCSER1-206ENST00000508086 CLASP1Q7Z460 1538 aa0.03□□□□□ -2.4
CCSER1-206ENST00000508086 S100ZQ8WXG8 99 aa0.03□□□□□ -2.4
CCSER1-206ENST00000508086 ZANQ9Y493 2812 aa0.03□□□□□ -2.41
CCSER1-206ENST00000508086 SYNE2Q8WXH0 6885 aaKnown RBP0.02□□□□□ -2.41
CCSER1-206ENST00000508086 PKHD1P08F94 4074 aa0.02□□□□□ -2.41
CCSER1-206ENST00000508086 K7EMI3 77 aa0.02□□□□□ -2.41
CCSER1-206ENST00000508086 MAP1AP78559 2803 aaPredicted RBP0.02□□□□□ -2.41
CCSER1-206ENST00000508086 CROCC2H7BZ55 1655 aa0.02□□□□□ -2.41
CCSER1-206ENST00000508086 FSIP2Q5CZC0 6907 aa0.01□□□□□ -2.41
CCSER1-206ENST00000508086 PRLHP81277 87 aa0.01□□□□□ -2.41
CCSER1-206ENST00000508086 SPRR2GQ9BYE4 73 aa0.01□□□□□ -2.41
CCSER1-206ENST00000508086 SFTA3P0C7M3 94 aa0□□□□□ -2.41
CCSER1-206ENST00000508086 ANKRD36CQ5JPF3 1778 aa0□□□□□ -2.41
CCSER1-206ENST00000508086 ZZEF1O43149 2961 aa-0□□□□□ -2.41
CCSER1-206ENST00000508086 NF1P21359 2839 aa-0.01□□□□□ -2.41
CCSER1-206ENST00000508086 SPRR2AP35326 72 aa-0.01□□□□□ -2.41
CCSER1-206ENST00000508086 RPS27P42677 84 aaKnown RBP-0.01□□□□□ -2.41
CCSER1-206ENST00000508086 RPS27LQ71UM5 84 aaKnown RBP-0.01□□□□□ -2.41
CCSER1-206ENST00000508086 STAB1Q9NY15 2570 aa-0.01□□□□□ -2.41
CCSER1-206ENST00000508086 SSPOA2VEC9 5147 aa-0.02□□□□□ -2.41
CCSER1-206ENST00000508086 MINOS1Q5TGZ0 78 aa-0.02□□□□□ -2.41
CCSER1-206ENST00000508086 CDC42BPAQ5VT25 1732 aa-0.02□□□□□ -2.41
CCSER1-206ENST00000508086 TOGARAM1Q9Y4F4 1720 aa-0.02□□□□□ -2.41
CCSER1-206ENST00000508086 S4R3F8 94 aa-0.03□□□□□ -2.41
CCSER1-206ENST00000508086 FLGP20930 4061 aaPredicted RBP-0.04□□□□□ -2.42
CCSER1-206ENST00000508086 WT1-ASQ06250 92 aa-0.04□□□□□ -2.42
CCSER1-206ENST00000508086 KRTAP6-2Q3LI66 62 aa-0.04□□□□□ -2.42
CCSER1-206ENST00000508086 CEP290O15078 2479 aa-0.04□□□□□ -2.42
CCSER1-206ENST00000508086 SVEP1Q4LDE5 3571 aa-0.05□□□□□ -2.42
CCSER1-206ENST00000508086 SPTBN4Q9H254 2564 aa-0.05□□□□□ -2.42
CCSER1-206ENST00000508086 VPS13BQ7Z7G8 4022 aa-0.05□□□□□ -2.42
CCSER1-206ENST00000508086 SETD2Q9BYW2 2564 aaPredicted RBP-0.06□□□□□ -2.42
CCSER1-206ENST00000508086 SMIM5Q71RC9 77 aa-0.06□□□□□ -2.42
CCSER1-206ENST00000508086 PRXQ9BXM0 1461 aa-0.06□□□□□ -2.42
CCSER1-206ENST00000508086 IGIPA6NJ69 53 aa-0.07□□□□□ -2.42
CCSER1-206ENST00000508086 M0R1W7 72 aa-0.07□□□□□ -2.42
CCSER1-206ENST00000508086 NCBP2-AS2Q69YL0 99 aa-0.07□□□□□ -2.42
CCSER1-206ENST00000508086 C6orf48Q9UBA6 75 aa-0.07□□□□□ -2.42
CCSER1-206ENST00000508086 PREX2Q70Z35 1606 aa-0.07□□□□□ -2.42
CCSER1-206ENST00000508086 MACF1Q9UPN3 7388 aaKnown RBP-0.08□□□□□ -2.42
CCSER1-206ENST00000508086 PDZD2O15018 2839 aa-0.08□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms