RNA–Protein interactions for RNA: ENST00000506960.5

SSBP2-206, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 2

Gene SSBP2, Length 685 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-206ENST00000506960 RPL39P62891 51 aaKnown RBP0.78□□□□□ -2.28
SSBP2-206ENST00000506960 FAM74A1Q5RGS3 127 aa0.78□□□□□ -2.28
SSBP2-206ENST00000506960 SFT2D1Q8WV19 159 aa0.78□□□□□ -2.28
SSBP2-206ENST00000506960 SMIM4Q8WVI0 70 aa0.78□□□□□ -2.28
SSBP2-206ENST00000506960 PRRT1Q99946 306 aa0.78□□□□□ -2.28
SSBP2-206ENST00000506960 NIT2Q9NQR4 276 aa0.78□□□□□ -2.28
SSBP2-206ENST00000506960 CDC42SE2Q9NRR3 84 aa0.78□□□□□ -2.28
SSBP2-206ENST00000506960 LYRM2Q9NU23 88 aaPredicted RBP0.78□□□□□ -2.28
SSBP2-206ENST00000506960 SCP2D1Q9UJQ7 156 aa0.78□□□□□ -2.28
SSBP2-206ENST00000506960 FXYD6-FXYD2A0A087WZ82 144 aa0.77□□□□□ -2.29
SSBP2-206ENST00000506960 TRBV30A0A0K0K1B3 111 aa0.77□□□□□ -2.29
SSBP2-206ENST00000506960 C9orf170A2RU37 121 aa0.77□□□□□ -2.29
SSBP2-206ENST00000506960 C7orf77A4D0Y5 90 aa0.77□□□□□ -2.29
SSBP2-206ENST00000506960 ZNF25P17030 456 aaPredicted RBP0.77□□□□□ -2.29
SSBP2-206ENST00000506960 CEBPGP53567 150 aa0.77□□□□□ -2.29
SSBP2-206ENST00000506960 RPS29P62273 56 aaKnown RBP0.77□□□□□ -2.29
SSBP2-206ENST00000506960 TMEM128Q5BJH2 165 aa0.77□□□□□ -2.29
SSBP2-206ENST00000506960 Q5VV11 94 aa0.77□□□□□ -2.29
SSBP2-206ENST00000506960 AKAP14Q86UN6 197 aa0.77□□□□□ -2.29
SSBP2-206ENST00000506960 IMUPQ9GZP8 106 aa0.77□□□□□ -2.29
SSBP2-206ENST00000506960 NHP2Q9NX24 153 aaKnown RBP0.77□□□□□ -2.29
SSBP2-206ENST00000506960 CACFD1Q9UGQ2 172 aa0.77□□□□□ -2.29
SSBP2-206ENST00000506960 EPDR1Q9UM22 224 aa0.77□□□□□ -2.29
SSBP2-206ENST00000506960 TRBV20-1A0A075B6N2 111 aa0.76□□□□□ -2.29
SSBP2-206ENST00000506960 LOC110117498A0A087WWA1 95 aa0.76□□□□□ -2.29
SSBP2-206ENST00000506960 A0A087WXM4 84 aa0.76□□□□□ -2.29
SSBP2-206ENST00000506960 C1orf196B1AJZ1 125 aa0.76□□□□□ -2.29
SSBP2-206ENST00000506960 NCR3O14931 201 aa0.76□□□□□ -2.29
SSBP2-206ENST00000506960 SIX6O95475 246 aa0.76□□□□□ -2.29
SSBP2-206ENST00000506960 IGLC6P0CF74 106 aa0.76□□□□□ -2.29
SSBP2-206ENST00000506960 AP3S2P59780 193 aa0.76□□□□□ -2.29
SSBP2-206ENST00000506960 UBE2G1P62253 170 aa0.76□□□□□ -2.29
SSBP2-206ENST00000506960 STX12Q86Y82 276 aa0.76□□□□□ -2.29
SSBP2-206ENST00000506960 BORCS7Q96B45 105 aa0.76□□□□□ -2.29
SSBP2-206ENST00000506960 GGACTQ9BVM4 153 aa0.76□□□□□ -2.29
SSBP2-206ENST00000506960 CXCL1P09341 107 aa0.75□□□□□ -2.29
SSBP2-206ENST00000506960 S100A11P31949 105 aa0.75□□□□□ -2.29
SSBP2-206ENST00000506960 CKS1BP61024 79 aa0.75□□□□□ -2.29
SSBP2-206ENST00000506960 TEX261Q6UWH6 196 aa0.75□□□□□ -2.29
SSBP2-206ENST00000506960 ATP11AUNQ6ZP68 121 aa0.75□□□□□ -2.29
SSBP2-206ENST00000506960 SLC25A21Q9BQT8 299 aaPredicted RBP0.75□□□□□ -2.29
SSBP2-206ENST00000506960 LIMD2Q9BT23 127 aa0.75□□□□□ -2.29
SSBP2-206ENST00000506960 CYSLTR1Q9Y271 337 aa0.75□□□□□ -2.29
SSBP2-206ENST00000506960 LOC107984156A0A0G2JMH3 177 aa0.74□□□□□ -2.29
SSBP2-206ENST00000506960 CCDC160A6NGH7 325 aa0.74□□□□□ -2.29
SSBP2-206ENST00000506960 C17orf112F2Z3M2 114 aa0.74□□□□□ -2.29
SSBP2-206ENST00000506960 I3L3M4 83 aa0.74□□□□□ -2.29
SSBP2-206ENST00000506960 FCER1GP30273 86 aa0.74□□□□□ -2.29
SSBP2-206ENST00000506960 HBBP68871 147 aa0.74□□□□□ -2.29
SSBP2-206ENST00000506960 RBM3P98179 157 aaKnown RBP0.74□□□□□ -2.29
SSBP2-206ENST00000506960 KRTAP19-8Q3LI54 63 aa0.74□□□□□ -2.29
SSBP2-206ENST00000506960 ARL17AQ8IVW1 177 aa0.74□□□□□ -2.29
SSBP2-206ENST00000506960 AP3S1Q92572 193 aa0.74□□□□□ -2.29
SSBP2-206ENST00000506960 TRAV12-1A0A0B4J245 112 aa0.73□□□□□ -2.29
SSBP2-206ENST00000506960 ETDCA0A1B0GVM5 59 aa0.73□□□□□ -2.29
SSBP2-206ENST00000506960 D6R8Y8 96 aa0.73□□□□□ -2.29
SSBP2-206ENST00000506960 F8VRH5 84 aa0.73□□□□□ -2.29
SSBP2-206ENST00000506960 NDUFB6O95139 128 aa0.73□□□□□ -2.29
SSBP2-206ENST00000506960 SPINK8P0C7L1 97 aa0.73□□□□□ -2.29
SSBP2-206ENST00000506960 MT1XP80297 61 aa0.73□□□□□ -2.29
SSBP2-206ENST00000506960 SSBP1Q04837 148 aaKnown RBP0.73□□□□□ -2.29
SSBP2-206ENST00000506960 LINC01554Q52M75 96 aa0.73□□□□□ -2.29
SSBP2-206ENST00000506960 Q8IZM0 81 aa0.73□□□□□ -2.29
SSBP2-206ENST00000506960 TOMM5Q8N4H5 51 aa0.73□□□□□ -2.29
SSBP2-206ENST00000506960 Q96NJ1 140 aa0.73□□□□□ -2.29
SSBP2-206ENST00000506960 ST20Q9HBF5 79 aa0.73□□□□□ -2.29
SSBP2-206ENST00000506960 BATF3Q9NR55 127 aa0.73□□□□□ -2.29
SSBP2-206ENST00000506960 CDKN2A-AS1Q9UH64 79 aa0.73□□□□□ -2.29
SSBP2-206ENST00000506960 HSPB11Q9Y547 144 aa0.73□□□□□ -2.29
SSBP2-206ENST00000506960 V9GYH0 126 aa0.73□□□□□ -2.29
SSBP2-206ENST00000506960 TRBV10-3A0A0K0K1G6 114 aa0.72□□□□□ -2.29
SSBP2-206ENST00000506960 FAM236AA0A1B0GUQ0 79 aa0.72□□□□□ -2.29
SSBP2-206ENST00000506960 FAM236BA0A1B0GV22 79 aa0.72□□□□□ -2.29
SSBP2-206ENST00000506960 A0A1W2PRE2 83 aa0.72□□□□□ -2.29
SSBP2-206ENST00000506960 MAP1LC3B2A6NCE7 125 aa0.72□□□□□ -2.29
SSBP2-206ENST00000506960 POLR2KP53803 58 aaKnown RBP0.72□□□□□ -2.29
SSBP2-206ENST00000506960 SSBP3-AS1Q7Z2R9 100 aa0.72□□□□□ -2.29
SSBP2-206ENST00000506960 HIST1H2BLQ99880 126 aa0.72□□□□□ -2.29
SSBP2-206ENST00000506960 MAP1LC3BQ9GZQ8 125 aa0.72□□□□□ -2.29
SSBP2-206ENST00000506960 TMEM191AQ9H0A3 160 aa0.72□□□□□ -2.29
SSBP2-206ENST00000506960 CDC42SE1Q9NRR8 79 aa0.72□□□□□ -2.29
SSBP2-206ENST00000506960 TMEM167BQ9NRX6 74 aa0.72□□□□□ -2.29
SSBP2-206ENST00000506960 TRBV27A0A0K0K1C4 114 aa0.71□□□□□ -2.3
SSBP2-206ENST00000506960 PDE6DO43924 150 aa0.71□□□□□ -2.3
SSBP2-206ENST00000506960 ATP5HO75947 161 aa0.71□□□□□ -2.3
SSBP2-206ENST00000506960 IFNA1P01562 189 aa0.71□□□□□ -2.3
SSBP2-206ENST00000506960 FAUP35544 74 aaKnown RBP0.71□□□□□ -2.3
SSBP2-206ENST00000506960 RPL35P42766 123 aaKnown RBP0.71□□□□□ -2.3
SSBP2-206ENST00000506960 MRPS10P82664 201 aaKnown RBP0.71□□□□□ -2.3
SSBP2-206ENST00000506960 BAGE2Q86Y30 109 aa0.71□□□□□ -2.3
SSBP2-206ENST00000506960 WFDC13Q8IUB5 93 aa0.71□□□□□ -2.3
SSBP2-206ENST00000506960 COX7B2Q8TF08 81 aa0.71□□□□□ -2.3
SSBP2-206ENST00000506960 PIGBOS1A0A0B4J2F0 54 aa0.7□□□□□ -2.3
SSBP2-206ENST00000506960 CTXND1A0A1B0GTU2 59 aa0.7□□□□□ -2.3
SSBP2-206ENST00000506960 SPRR1AP35321 89 aa0.7□□□□□ -2.3
SSBP2-206ENST00000506960 KRTAP20-2Q3LI61 65 aa0.7□□□□□ -2.3
SSBP2-206ENST00000506960 Q6ZRX8 168 aa0.7□□□□□ -2.3
SSBP2-206ENST00000506960 DEFB105AQ8NG35 78 aa0.7□□□□□ -2.3
SSBP2-206ENST00000506960 TMEM141Q96I45 108 aa0.7□□□□□ -2.3
SSBP2-206ENST00000506960 SMIM2Q9BVW6 85 aa0.7□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms