RNA–Protein interactions for RNA: ENST00000506626.1

SMAD1-205, Transcript of SMAD family member 1, humanhuman

TSL 4

Gene SMAD1, Length 518 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-205ENST00000506626 LELP1Q5T871 98 aa1.98□□□□□ -2.09
SMAD1-205ENST00000506626 DEFB132Q7Z7B7 95 aa1.98□□□□□ -2.09
SMAD1-205ENST00000506626 C4orf3Q8WVX3 66 aa1.98□□□□□ -2.09
SMAD1-205ENST00000506626 VPS13AQ96RL7 3174 aa1.98□□□□□ -2.09
SMAD1-205ENST00000506626 ALMS1Q8TCU4 4167 aa1.98□□□□□ -2.09
SMAD1-205ENST00000506626 ANKRD17O75179 2603 aaKnown RBP1.97□□□□□ -2.09
SMAD1-205ENST00000506626 LY6EQ16553 131 aa1.97□□□□□ -2.09
SMAD1-205ENST00000506626 C15orf56Q8N910 161 aa1.97□□□□□ -2.09
SMAD1-205ENST00000506626 XIRP2A4UGR9 3374 aa1.96□□□□□ -2.09
SMAD1-205ENST00000506626 MKI67P46013 3256 aaKnown RBP1.96□□□□□ -2.1
SMAD1-205ENST00000506626 TRANK1O15050 2925 aa1.96□□□□□ -2.1
SMAD1-205ENST00000506626 SPTA1P02549 2419 aa1.96□□□□□ -2.1
SMAD1-205ENST00000506626 A0A1B0GVX0 72 aa1.96□□□□□ -2.1
SMAD1-205ENST00000506626 PANO1I0J062 215 aa1.96□□□□□ -2.1
SMAD1-205ENST00000506626 SSBP3-AS1Q7Z2R9 100 aa1.96□□□□□ -2.1
SMAD1-205ENST00000506626 Q96NJ1 140 aa1.96□□□□□ -2.1
SMAD1-205ENST00000506626 CFAP47Q6ZTR5 3102 aa1.96□□□□□ -2.1
SMAD1-205ENST00000506626 EP300Q09472 2414 aaPredicted RBP1.96□□□□□ -2.1
SMAD1-205ENST00000506626 CIRBP-AS1Q8TBR5 109 aa1.95□□□□□ -2.1
SMAD1-205ENST00000506626 DNAH14Q0VDD8 3507 aa1.95□□□□□ -2.1
SMAD1-205ENST00000506626 PTPRZ1P23471 2315 aaPredicted RBP1.95□□□□□ -2.1
SMAD1-205ENST00000506626 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.94□□□□□ -2.1
SMAD1-205ENST00000506626 DEFB136Q30KP8 78 aa1.94□□□□□ -2.1
SMAD1-205ENST00000506626 SPTBN5Q9NRC6 3674 aaKnown RBP1.94□□□□□ -2.1
SMAD1-205ENST00000506626 ZDBF2Q9HCK1 2354 aa1.94□□□□□ -2.1
SMAD1-205ENST00000506626 FRYLO94915 3013 aa1.93□□□□□ -2.1
SMAD1-205ENST00000506626 HTTP42858 3142 aa1.93□□□□□ -2.1
SMAD1-205ENST00000506626 FRYQ5TBA9 3013 aa1.93□□□□□ -2.1
SMAD1-205ENST00000506626 NBDYA0A0U1RRE5 68 aa1.93□□□□□ -2.1
SMAD1-205ENST00000506626 DEFB130BP0DP73 79 aa1.93□□□□□ -2.1
SMAD1-205ENST00000506626 DEFB130AP0DP74 79 aa1.93□□□□□ -2.1
SMAD1-205ENST00000506626 KRTAP21-2Q3LI59 83 aa1.93□□□□□ -2.1
SMAD1-205ENST00000506626 COX6B2Q6YFQ2 88 aa1.93□□□□□ -2.1
SMAD1-205ENST00000506626 NCOR1O75376 2440 aa1.93□□□□□ -2.1
SMAD1-205ENST00000506626 USP34Q70CQ2 3546 aa1.93□□□□□ -2.1
SMAD1-205ENST00000506626 CHD9Q3L8U1 2897 aa1.92□□□□□ -2.1
SMAD1-205ENST00000506626 KALRNO60229 2985 aa1.92□□□□□ -2.1
SMAD1-205ENST00000506626 CHD7Q9P2D1 2997 aa1.92□□□□□ -2.1
SMAD1-205ENST00000506626 PIEZO2Q9H5I5 2752 aa1.92□□□□□ -2.1
SMAD1-205ENST00000506626 A0A1B0GU33 70 aa1.92□□□□□ -2.1
SMAD1-205ENST00000506626 H0YAA0 97 aa1.92□□□□□ -2.1
SMAD1-205ENST00000506626 C10orf99Q6UWK7 81 aa1.92□□□□□ -2.1
SMAD1-205ENST00000506626 Q6ZSA8 131 aa1.92□□□□□ -2.1
SMAD1-205ENST00000506626 PSORS1C2Q9UIG4 136 aa1.92□□□□□ -2.1
SMAD1-205ENST00000506626 IGF2RP11717 2491 aa1.92□□□□□ -2.1
SMAD1-205ENST00000506626 CACNA1HO95180 2353 aa1.91□□□□□ -2.1
SMAD1-205ENST00000506626 C2CD3Q4AC94 2353 aa1.91□□□□□ -2.1
SMAD1-205ENST00000506626 A0A0G2JQZ4 141 aa1.91□□□□□ -2.1
SMAD1-205ENST00000506626 A0A1W2PNN7 141 aa1.91□□□□□ -2.1
SMAD1-205ENST00000506626 H3BNG1 76 aa1.91□□□□□ -2.1
SMAD1-205ENST00000506626 CRIPTQ9P021 101 aa1.91□□□□□ -2.1
SMAD1-205ENST00000506626 C5orf42Q9H799 3197 aa1.9□□□□□ -2.1
SMAD1-205ENST00000506626 AKAP13Q12802 2813 aa1.9□□□□□ -2.11
SMAD1-205ENST00000506626 A0A096LPF7 62 aa1.9□□□□□ -2.11
SMAD1-205ENST00000506626 KRTAP10-10P60014 251 aa1.9□□□□□ -2.11
SMAD1-205ENST00000506626 CHD6Q8TD26 2715 aa1.9□□□□□ -2.11
SMAD1-205ENST00000506626 SPTBN4Q9H254 2564 aa1.9□□□□□ -2.11
SMAD1-205ENST00000506626 TRIOO75962 3097 aa1.89□□□□□ -2.11
SMAD1-205ENST00000506626 SPG11Q96JI7 2443 aa1.89□□□□□ -2.11
SMAD1-205ENST00000506626 H1FX-AS1Q4G0G2 97 aa1.89□□□□□ -2.11
SMAD1-205ENST00000506626 WDFY4Q6ZS81 3184 aa1.89□□□□□ -2.11
SMAD1-205ENST00000506626 PRUNE2Q8WUY3 3088 aa1.89□□□□□ -2.11
SMAD1-205ENST00000506626 TPRXLQ17RH7 258 aa1.88□□□□□ -2.11
SMAD1-205ENST00000506626 ABCA2Q9BZC7 2435 aa1.88□□□□□ -2.11
SMAD1-205ENST00000506626 TENM2Q9NT68 2774 aa1.87□□□□□ -2.11
SMAD1-205ENST00000506626 K7EIL1 84 aa1.87□□□□□ -2.11
SMAD1-205ENST00000506626 PRLHP81277 87 aa1.87□□□□□ -2.11
SMAD1-205ENST00000506626 LINC01556Q5JQF7 62 aa1.87□□□□□ -2.11
SMAD1-205ENST00000506626 DCHS1Q96JQ0 3298 aa1.87□□□□□ -2.11
SMAD1-205ENST00000506626 LAMA2P24043 3122 aaKnown RBP1.87□□□□□ -2.11
SMAD1-205ENST00000506626 DMDP11532 3685 aa1.87□□□□□ -2.11
SMAD1-205ENST00000506626 GVINP1Q7Z2Y8 2422 aa1.87□□□□□ -2.11
SMAD1-205ENST00000506626 LAMA3Q16787 3333 aa1.86□□□□□ -2.11
SMAD1-205ENST00000506626 DSPP15924 2871 aaKnown RBP1.86□□□□□ -2.11
SMAD1-205ENST00000506626 SPART-AS1P0CW21 52 aa1.86□□□□□ -2.11
SMAD1-205ENST00000506626 RPL37P61927 97 aaKnown RBP1.86□□□□□ -2.11
SMAD1-205ENST00000506626 NCOR2Q9Y618 2525 aa1.86□□□□□ -2.11
SMAD1-205ENST00000506626 FREM2Q5SZK8 3169 aa1.86□□□□□ -2.11
SMAD1-205ENST00000506626 MAP1AP78559 2803 aaPredicted RBP1.85□□□□□ -2.11
SMAD1-205ENST00000506626 HIVEP2P31629 2446 aa1.85□□□□□ -2.11
SMAD1-205ENST00000506626 SPTAN1Q13813 2472 aaKnown RBP1.85□□□□□ -2.11
SMAD1-205ENST00000506626 LAMA1P25391 3075 aa1.85□□□□□ -2.11
SMAD1-205ENST00000506626 BRCA2P51587 3418 aa1.85□□□□□ -2.11
SMAD1-205ENST00000506626 WDFY3Q8IZQ1 3526 aa1.84□□□□□ -2.11
SMAD1-205ENST00000506626 ANKHD1Q8IWZ3 2542 aaKnown RBP1.84□□□□□ -2.11
SMAD1-205ENST00000506626 CSPG4Q6UVK1 2322 aa1.84□□□□□ -2.11
SMAD1-205ENST00000506626 NBASA2RRP1 2371 aa1.84□□□□□ -2.11
SMAD1-205ENST00000506626 CREBBPQ92793 2442 aa1.84□□□□□ -2.11
SMAD1-205ENST00000506626 PLAC4Q8WY50 150 aa1.84□□□□□ -2.11
SMAD1-205ENST00000506626 DMXL2Q8TDJ6 3036 aa1.84□□□□□ -2.12
SMAD1-205ENST00000506626 BOD1L1Q8NFC6 3051 aa1.83□□□□□ -2.12
SMAD1-205ENST00000506626 TACC2O95359 2948 aa1.83□□□□□ -2.12
SMAD1-205ENST00000506626 FLG2Q5D862 2391 aaPredicted RBP1.83□□□□□ -2.12
SMAD1-205ENST00000506626 KRTAP13-1Q8IUC0 172 aa1.83□□□□□ -2.12
SMAD1-205ENST00000506626 PRO2289Q9P1D8 64 aa1.83□□□□□ -2.12
SMAD1-205ENST00000506626 ITPR1Q14643 2758 aa1.83□□□□□ -2.12
SMAD1-205ENST00000506626 REV3LO60673 3130 aa1.83□□□□□ -2.12
SMAD1-205ENST00000506626 CELSR2Q9HCU4 2923 aa1.83□□□□□ -2.12
SMAD1-205ENST00000506626 VCANP13611 3396 aa1.82□□□□□ -2.12
SMAD1-205ENST00000506626 CEP290O15078 2479 aa1.82□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms