RNA–Protein interactions for RNA: ENST00000506515.1

HERC4-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-213ENST00000506515 FAM213BQ8TBF2 198 aa2.19□□□□□ -2.06
HERC4-213ENST00000506515 TMEM141Q96I45 108 aa2.19□□□□□ -2.06
HERC4-213ENST00000506515 TOMM7Q9P0U1 55 aa2.19□□□□□ -2.06
HERC4-213ENST00000506515 GNG13Q9P2W3 67 aa2.19□□□□□ -2.06
HERC4-213ENST00000506515 FXYD6-FXYD2A0A087WZ82 144 aa2.18□□□□□ -2.06
HERC4-213ENST00000506515 A0A1B0GW54 56 aa2.18□□□□□ -2.06
HERC4-213ENST00000506515 KANTRA0A1W2PQU2 76 aa2.18□□□□□ -2.06
HERC4-213ENST00000506515 FABP9Q0Z7S8 132 aa2.18□□□□□ -2.06
HERC4-213ENST00000506515 PMAIP1Q13794 54 aa2.18□□□□□ -2.06
HERC4-213ENST00000506515 COX17Q14061 63 aa2.18□□□□□ -2.06
HERC4-213ENST00000506515 LIMD2Q9BT23 127 aa2.18□□□□□ -2.06
HERC4-213ENST00000506515 RNASE7Q9H1E1 156 aaKnown RBP2.18□□□□□ -2.06
HERC4-213ENST00000506515 XAGE1AQ9HD64 81 aa2.18□□□□□ -2.06
HERC4-213ENST00000506515 HMSDA8MTL9 139 aa2.17□□□□□ -2.06
HERC4-213ENST00000506515 HIGD1CA8MV81 97 aa2.17□□□□□ -2.06
HERC4-213ENST00000506515 TMEM258P61165 79 aa2.17□□□□□ -2.06
HERC4-213ENST00000506515 ZNF345Q14585 488 aa2.17□□□□□ -2.06
HERC4-213ENST00000506515 C2orf82Q6UX34 121 aa2.17□□□□□ -2.06
HERC4-213ENST00000506515 LINC00587B1AMM8 73 aa2.16□□□□□ -2.06
HERC4-213ENST00000506515 IFITM2Q01629 132 aa2.16□□□□□ -2.06
HERC4-213ENST00000506515 Q6ZUT4 128 aa2.16□□□□□ -2.06
HERC4-213ENST00000506515 AKAP14Q86UN6 197 aa2.16□□□□□ -2.06
HERC4-213ENST00000506515 SPRR4Q96PI1 79 aa2.16□□□□□ -2.06
HERC4-213ENST00000506515 TMEM126AQ9H061 195 aa2.16□□□□□ -2.06
HERC4-213ENST00000506515 NAT8BQ9UHF3 227 aa2.16□□□□□ -2.06
HERC4-213ENST00000506515 LAMTOR2Q9Y2Q5 125 aa2.16□□□□□ -2.06
HERC4-213ENST00000506515 USH2AO75445 5202 aa2.16□□□□□ -2.06
HERC4-213ENST00000506515 SSPOA2VEC9 5147 aa2.16□□□□□ -2.06
HERC4-213ENST00000506515 FCGBPQ9Y6R7 5405 aaPredicted RBP2.16□□□□□ -2.06
HERC4-213ENST00000506515 FLGP20930 4061 aaPredicted RBP2.15□□□□□ -2.06
HERC4-213ENST00000506515 TRAV9-1A0A075B6T8 112 aa2.15□□□□□ -2.07
HERC4-213ENST00000506515 H3BRM9 83 aa2.15□□□□□ -2.07
HERC4-213ENST00000506515 LST1O00453 97 aa2.15□□□□□ -2.07
HERC4-213ENST00000506515 ARPC5O15511 151 aa2.15□□□□□ -2.07
HERC4-213ENST00000506515 PRLHP81277 87 aa2.15□□□□□ -2.07
HERC4-213ENST00000506515 SMIM2Q9BVW6 85 aa2.15□□□□□ -2.07
HERC4-213ENST00000506515 OSTCQ9NRP0 149 aa2.15□□□□□ -2.07
HERC4-213ENST00000506515 CYSLTR1Q9Y271 337 aa2.15□□□□□ -2.07
HERC4-213ENST00000506515 TRBV20-1A0A075B6N2 111 aa2.14□□□□□ -2.07
HERC4-213ENST00000506515 A8MUN3 132 aa2.14□□□□□ -2.07
HERC4-213ENST00000506515 M0R378 163 aa2.14□□□□□ -2.07
HERC4-213ENST00000506515 ALKAL2Q6UX46 152 aa2.14□□□□□ -2.07
HERC4-213ENST00000506515 KRTAP4-1Q9BYQ7 146 aa2.14□□□□□ -2.07
HERC4-213ENST00000506515 ETDCA0A1B0GVM5 59 aa2.13□□□□□ -2.07
HERC4-213ENST00000506515 C20orf202A1L168 122 aa2.13□□□□□ -2.07
HERC4-213ENST00000506515 H3BT86 120 aa2.13□□□□□ -2.07
HERC4-213ENST00000506515 RPL39P62891 51 aaKnown RBP2.13□□□□□ -2.07
HERC4-213ENST00000506515 Q5BKY6 102 aa2.13□□□□□ -2.07
HERC4-213ENST00000506515 ATP11AUNQ6ZP68 121 aa2.13□□□□□ -2.07
HERC4-213ENST00000506515 COX7B2Q8TF08 81 aa2.13□□□□□ -2.07
HERC4-213ENST00000506515 AMELXQ99217 191 aa2.13□□□□□ -2.07
HERC4-213ENST00000506515 RAB14P61106 215 aa2.12□□□□□ -2.07
HERC4-213ENST00000506515 KTN1-AS1Q86SY8 53 aa2.12□□□□□ -2.07
HERC4-213ENST00000506515 NXT2Q9NPJ8 142 aaKnown RBP2.12□□□□□ -2.07
HERC4-213ENST00000506515 MACF1Q9UPN3 7388 aaKnown RBP2.12□□□□□ -2.07
HERC4-213ENST00000506515 D6R8Y8 96 aa2.11□□□□□ -2.07
HERC4-213ENST00000506515 KCNQ1DNQ9H478 68 aa2.11□□□□□ -2.07
HERC4-213ENST00000506515 CDKN2A-AS1Q9UH64 79 aa2.11□□□□□ -2.07
HERC4-213ENST00000506515 NAT8Q9UHE5 227 aa2.11□□□□□ -2.07
HERC4-213ENST00000506515 SMIM27A0A1W2PRY6 76 aa2.1□□□□□ -2.07
HERC4-213ENST00000506515 IGIPA6NJ69 53 aa2.1□□□□□ -2.07
HERC4-213ENST00000506515 TMEM238C9JI98 176 aa2.1□□□□□ -2.07
HERC4-213ENST00000506515 KRTAP19-2Q3LHN2 52 aa2.1□□□□□ -2.07
HERC4-213ENST00000506515 C9orf153Q5TBE3 101 aa2.1□□□□□ -2.07
HERC4-213ENST00000506515 Q6Q795 121 aa2.1□□□□□ -2.07
HERC4-213ENST00000506515 COA5Q86WW8 74 aa2.1□□□□□ -2.07
HERC4-213ENST00000506515 Q8N8P6 123 aa2.1□□□□□ -2.07
HERC4-213ENST00000506515 PRELID3AQ96N28 172 aa2.1□□□□□ -2.07
HERC4-213ENST00000506515 SMIM7Q9BQ49 75 aa2.1□□□□□ -2.07
HERC4-213ENST00000506515 LAMTOR3Q9UHA4 124 aa2.1□□□□□ -2.07
HERC4-213ENST00000506515 ERG28Q9UKR5 140 aa2.1□□□□□ -2.07
HERC4-213ENST00000506515 H7C2G1 150 aa2.09□□□□□ -2.07
HERC4-213ENST00000506515 TCL1BO95988 128 aa2.09□□□□□ -2.07
HERC4-213ENST00000506515 SRP19P09132 144 aaKnown RBP2.09□□□□□ -2.07
HERC4-213ENST00000506515 LINC00158P58513 81 aa2.09□□□□□ -2.07
HERC4-213ENST00000506515 RPL37P61927 97 aaKnown RBP2.09□□□□□ -2.07
HERC4-213ENST00000506515 Q5XG85 94 aa2.09□□□□□ -2.07
HERC4-213ENST00000506515 SCGB3A1Q96QR1 104 aa2.09□□□□□ -2.07
HERC4-213ENST00000506515 TRAV7A0A075B6U4 112 aa2.08□□□□□ -2.08
HERC4-213ENST00000506515 ZNF815PA8K554 130 aa2.08□□□□□ -2.08
HERC4-213ENST00000506515 LEPROTO15243 131 aa2.08□□□□□ -2.08
HERC4-213ENST00000506515 SPRR1AP35321 89 aa2.08□□□□□ -2.08
HERC4-213ENST00000506515 AKR1D1P51857 326 aa2.08□□□□□ -2.08
HERC4-213ENST00000506515 PRO1933Q9H354 126 aa2.08□□□□□ -2.08
HERC4-213ENST00000506515 TRBV10-2A0A0K0K1G8 114 aa2.07□□□□□ -2.08
HERC4-213ENST00000506515 C9orf92A6NGG3 77 aa2.07□□□□□ -2.08
HERC4-213ENST00000506515 TOMM6Q96B49 74 aa2.07□□□□□ -2.08
HERC4-213ENST00000506515 CST9LQ9H4G1 147 aa2.07□□□□□ -2.08
HERC4-213ENST00000506515 V9GYV3 84 aa2.07□□□□□ -2.08
HERC4-213ENST00000506515 NEBP20929 6669 aa2.06□□□□□ -2.08
HERC4-213ENST00000506515 S100A7L2Q5SY68 101 aa2.06□□□□□ -2.08
HERC4-213ENST00000506515 MRPL54Q6P161 138 aaKnown RBP2.06□□□□□ -2.08
HERC4-213ENST00000506515 ANKRD29Q8N6D5 301 aa2.06□□□□□ -2.08
HERC4-213ENST00000506515 SPINK8P0C7L1 97 aa2.05□□□□□ -2.08
HERC4-213ENST00000506515 PEA15Q15121 130 aa2.05□□□□□ -2.08
HERC4-213ENST00000506515 Q6ZRX8 168 aa2.05□□□□□ -2.08
HERC4-213ENST00000506515 SMCO4Q9NRQ5 59 aa2.05□□□□□ -2.08
HERC4-213ENST00000506515 FAM236DA0A1B0GTK5 79 aa2.04□□□□□ -2.08
HERC4-213ENST00000506515 FAM236CP0DP71 79 aa2.04□□□□□ -2.08
HERC4-213ENST00000506515 SPRR1BP22528 89 aa2.04□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms