RNA–Protein interactions for RNA: ENST00000504672.5

PDGFC-204, Transcript of platelet derived growth factor C, humanhuman

TSL 5

Gene PDGFC, Length 786 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-204ENST00000504672 TMEM126AQ9H061 195 aa4.98□□□□□ -1.61
PDGFC-204ENST00000504672 FCGBPQ9Y6R7 5405 aaPredicted RBP4.98□□□□□ -1.61
PDGFC-204ENST00000504672 A0A0B4J2C4 111 aa4.97□□□□□ -1.61
PDGFC-204ENST00000504672 TRBV10-3A0A0K0K1G6 114 aa4.97□□□□□ -1.61
PDGFC-204ENST00000504672 HIST1H4GQ99525 98 aa4.97□□□□□ -1.61
PDGFC-204ENST00000504672 HIGD2AQ9BW72 106 aa4.97□□□□□ -1.61
PDGFC-204ENST00000504672 CBY1Q9Y3M2 126 aa4.97□□□□□ -1.61
PDGFC-204ENST00000504672 TRAV13-2A0A0B4J235 113 aa4.96□□□□□ -1.62
PDGFC-204ENST00000504672 TRBV7-6A0A0J9YX20 115 aa4.96□□□□□ -1.62
PDGFC-204ENST00000504672 TSTD3H0UI37 97 aa4.96□□□□□ -1.62
PDGFC-204ENST00000504672 CFC1P0CG37 223 aa4.96□□□□□ -1.62
PDGFC-204ENST00000504672 DDTP30046 118 aa4.96□□□□□ -1.62
PDGFC-204ENST00000504672 FXYD2P54710 66 aa4.96□□□□□ -1.62
PDGFC-204ENST00000504672 NPC2P61916 151 aa4.95□□□□□ -1.62
PDGFC-204ENST00000504672 SPRR4Q96PI1 79 aa4.95□□□□□ -1.62
PDGFC-204ENST00000504672 PRO1933Q9H354 126 aa4.95□□□□□ -1.62
PDGFC-204ENST00000504672 FLGP20930 4061 aaPredicted RBP4.94□□□□□ -1.62
PDGFC-204ENST00000504672 NCR3O14931 201 aa4.94□□□□□ -1.62
PDGFC-204ENST00000504672 SPINK1P00995 79 aa4.94□□□□□ -1.62
PDGFC-204ENST00000504672 BVES-AS1Q5T3Y7 98 aa4.94□□□□□ -1.62
PDGFC-204ENST00000504672 TRAV23DV6A0A075B6W5 121 aa4.93□□□□□ -1.62
PDGFC-204ENST00000504672 ZNF73O43830 326 aaPredicted RBP4.93□□□□□ -1.62
PDGFC-204ENST00000504672 ELOF1P60002 83 aaKnown RBP4.92□□□□□ -1.62
PDGFC-204ENST00000504672 S100A7L2Q5SY68 101 aa4.92□□□□□ -1.62
PDGFC-204ENST00000504672 Q8N377 158 aa4.92□□□□□ -1.62
PDGFC-204ENST00000504672 M0R143 59 aa4.91□□□□□ -1.62
PDGFC-204ENST00000504672 Q6ZRX8 168 aa4.91□□□□□ -1.62
PDGFC-204ENST00000504672 PRO1854Q9UHT4 67 aa4.91□□□□□ -1.62
PDGFC-204ENST00000504672 COX6B2Q6YFQ2 88 aa4.9□□□□□ -1.63
PDGFC-204ENST00000504672 SMIM11BQ8TCY0 68 aa4.9□□□□□ -1.63
PDGFC-204ENST00000504672 SYNE2Q8WXH0 6885 aaKnown RBP4.89□□□□□ -1.63
PDGFC-204ENST00000504672 C9orf92A6NGG3 77 aa4.89□□□□□ -1.63
PDGFC-204ENST00000504672 SMCR5Q8TEV8 140 aa4.89□□□□□ -1.63
PDGFC-204ENST00000504672 Q9BRP9 147 aa4.89□□□□□ -1.63
PDGFC-204ENST00000504672 IGLV9-49A0A0B4J1Y8 123 aa4.88□□□□□ -1.63
PDGFC-204ENST00000504672 A6NDN8 102 aa4.88□□□□□ -1.63
PDGFC-204ENST00000504672 SLC25A20O43772 301 aa4.88□□□□□ -1.63
PDGFC-204ENST00000504672 C6orf99Q4VX62 202 aa4.88□□□□□ -1.63
PDGFC-204ENST00000504672 OR13C6PQ8NH95 151 aa4.88□□□□□ -1.63
PDGFC-204ENST00000504672 NHP2Q9NX24 153 aaKnown RBP4.88□□□□□ -1.63
PDGFC-204ENST00000504672 ETDCA0A1B0GVM5 59 aa4.87□□□□□ -1.63
PDGFC-204ENST00000504672 A0A1B0GX51 115 aa4.87□□□□□ -1.63
PDGFC-204ENST00000504672 SPRR1BP22528 89 aa4.87□□□□□ -1.63
PDGFC-204ENST00000504672 MOBPQ13875 183 aa4.87□□□□□ -1.63
PDGFC-204ENST00000504672 LINC00483Q53H64 154 aa4.87□□□□□ -1.63
PDGFC-204ENST00000504672 RAB37Q96AX2 223 aa4.87□□□□□ -1.63
PDGFC-204ENST00000504672 KRTAP9-3Q9BYQ3 159 aa4.87□□□□□ -1.63
PDGFC-204ENST00000504672 DHRS4-AS1Q9P1J3 65 aa4.87□□□□□ -1.63
PDGFC-204ENST00000504672 H0YGX0 51 aa4.86□□□□□ -1.63
PDGFC-204ENST00000504672 COX7BP24311 80 aa4.86□□□□□ -1.63
PDGFC-204ENST00000504672 HINT1P49773 126 aaPredicted RBP4.86□□□□□ -1.63
PDGFC-204ENST00000504672 GAGE2AQ6NT46 116 aa4.86□□□□□ -1.63
PDGFC-204ENST00000504672 ZNF706Q9Y5V0 76 aaPredicted RBP4.86□□□□□ -1.63
PDGFC-204ENST00000504672 MACF1Q9UPN3 7388 aaKnown RBP4.85□□□□□ -1.63
PDGFC-204ENST00000504672 IGLV5-48A0A075B6I7 105 aa4.85□□□□□ -1.63
PDGFC-204ENST00000504672 LINC00575Q6W349 94 aa4.85□□□□□ -1.63
PDGFC-204ENST00000504672 SNHG12Q9BXW3 62 aa4.85□□□□□ -1.63
PDGFC-204ENST00000504672 K7ERJ3 54 aa4.84□□□□□ -1.63
PDGFC-204ENST00000504672 ERC2-IT1O76042 136 aa4.84□□□□□ -1.63
PDGFC-204ENST00000504672 VAMP3Q15836 100 aa4.83□□□□□ -1.64
PDGFC-204ENST00000504672 TAX1BP3O14907 124 aa4.82□□□□□ -1.64
PDGFC-204ENST00000504672 RPS29P62273 56 aaKnown RBP4.82□□□□□ -1.64
PDGFC-204ENST00000504672 SSBP3-AS1Q7Z2R9 100 aa4.82□□□□□ -1.64
PDGFC-204ENST00000504672 PPDPFLQ8WWR9 84 aa4.82□□□□□ -1.64
PDGFC-204ENST00000504672 KRTAP23-1A1A580 65 aa4.81□□□□□ -1.64
PDGFC-204ENST00000504672 Q6Q795 121 aa4.81□□□□□ -1.64
PDGFC-204ENST00000504672 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.81□□□□□ -1.64
PDGFC-204ENST00000504672 FAM218AQ96MZ4 157 aa4.81□□□□□ -1.64
PDGFC-204ENST00000504672 hADV29S1A0JD25 119 aa4.8□□□□□ -1.64
PDGFC-204ENST00000504672 LST1O00453 97 aa4.8□□□□□ -1.64
PDGFC-204ENST00000504672 OCIAD2Q56VL3 154 aa4.8□□□□□ -1.64
PDGFC-204ENST00000504672 TRACP01848 142 aa4.79□□□□□ -1.64
PDGFC-204ENST00000504672 COX6CP09669 75 aa4.79□□□□□ -1.64
PDGFC-204ENST00000504672 COL5A1-AS1Q5SY13 56 aa4.79□□□□□ -1.64
PDGFC-204ENST00000504672 HRCT1Q6UXD1 115 aa4.79□□□□□ -1.64
PDGFC-204ENST00000504672 SMIM29Q86T20 159 aa4.79□□□□□ -1.64
PDGFC-204ENST00000504672 TEX49A0A1B0GTD5 131 aa4.78□□□□□ -1.64
PDGFC-204ENST00000504672 H3BQ85 93 aa4.78□□□□□ -1.64
PDGFC-204ENST00000504672 H7C2G1 150 aa4.78□□□□□ -1.64
PDGFC-204ENST00000504672 TRBV20-1A0A075B6N2 111 aa4.77□□□□□ -1.65
PDGFC-204ENST00000504672 Q1RN00 199 aa4.77□□□□□ -1.65
PDGFC-204ENST00000504672 C9orf153Q5TBE3 101 aa4.77□□□□□ -1.65
PDGFC-204ENST00000504672 Q6ZQY7 126 aa4.77□□□□□ -1.65
PDGFC-204ENST00000504672 ST20-AS1Q8NBB2 130 aa4.77□□□□□ -1.65
PDGFC-204ENST00000504672 A0A1W2PPM0 123 aa4.76□□□□□ -1.65
PDGFC-204ENST00000504672 LYRM7Q5U5X0 104 aa4.76□□□□□ -1.65
PDGFC-204ENST00000504672 SNCGO76070 127 aa4.75□□□□□ -1.65
PDGFC-204ENST00000504672 PSMB2P49721 201 aa4.75□□□□□ -1.65
PDGFC-204ENST00000504672 BATFQ16520 125 aa4.75□□□□□ -1.65
PDGFC-204ENST00000504672 CLEC2BQ92478 149 aa4.75□□□□□ -1.65
PDGFC-204ENST00000504672 H3BUT2 72 aa4.74□□□□□ -1.65
PDGFC-204ENST00000504672 TCL1BO95988 128 aa4.74□□□□□ -1.65
PDGFC-204ENST00000504672 PCP4L1A6NKN8 68 aa4.73□□□□□ -1.65
PDGFC-204ENST00000504672 UBE2V1Q13404 147 aa4.73□□□□□ -1.65
PDGFC-204ENST00000504672 ATXN8Q156A1 80 aa4.73□□□□□ -1.65
PDGFC-204ENST00000504672 TMEM256-PLSCR3K7ERE1 68 aa4.72□□□□□ -1.65
PDGFC-204ENST00000504672 FABP2P12104 132 aa4.72□□□□□ -1.65
PDGFC-204ENST00000504672 RPL37P61927 97 aaKnown RBP4.72□□□□□ -1.65
PDGFC-204ENST00000504672 KRTAP19-4Q3LI73 84 aa4.72□□□□□ -1.65
PDGFC-204ENST00000504672 A0A0A0MQY5 61 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms