RNA–Protein interactions for RNA: ENST00000504663.1

TPM3-217, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-217ENST00000504663 DNAL4O96015 105 aa6.3□□□□□ -1.4
TPM3-217ENST00000504663 Q8N377 158 aa6.3□□□□□ -1.4
TPM3-217ENST00000504663 OBSCN-AS1Q96MR7 158 aa6.3□□□□□ -1.4
TPM3-217ENST00000504663 ZNF861PO60384 105 aa6.29□□□□□ -1.4
TPM3-217ENST00000504663 UBE2AP49459 152 aa6.29□□□□□ -1.4
TPM3-217ENST00000504663 ETDBQ3ZM63 59 aa6.29□□□□□ -1.4
TPM3-217ENST00000504663 SMIM29Q86T20 159 aa6.29□□□□□ -1.4
TPM3-217ENST00000504663 HIGD2AQ9BW72 106 aa6.29□□□□□ -1.4
TPM3-217ENST00000504663 SPRR1BP22528 89 aa6.28□□□□□ -1.4
TPM3-217ENST00000504663 TEN1Q86WV5 123 aa6.28□□□□□ -1.4
TPM3-217ENST00000504663 BIRC6Q9NR09 4857 aa6.27□□□□□ -1.41
TPM3-217ENST00000504663 CDK2AP2O75956 126 aa6.26□□□□□ -1.41
TPM3-217ENST00000504663 LINC00483Q53H64 154 aa6.26□□□□□ -1.41
TPM3-217ENST00000504663 OCIAD2Q56VL3 154 aa6.26□□□□□ -1.41
TPM3-217ENST00000504663 SPRR4Q96PI1 79 aa6.26□□□□□ -1.41
TPM3-217ENST00000504663 FAT3Q8TDW7 4589 aa6.25□□□□□ -1.41
TPM3-217ENST00000504663 TEX49A0A1B0GTD5 131 aa6.25□□□□□ -1.41
TPM3-217ENST00000504663 TMEM256-PLSCR3K7ERE1 68 aa6.25□□□□□ -1.41
TPM3-217ENST00000504663 SMR3BP02814 79 aaPredicted RBP6.25□□□□□ -1.41
TPM3-217ENST00000504663 C3orf22Q8N5N4 141 aa6.25□□□□□ -1.41
TPM3-217ENST00000504663 PPDPFLQ8WWR9 84 aa6.25□□□□□ -1.41
TPM3-217ENST00000504663 RPL37AP61513 92 aaKnown RBP6.23□□□□□ -1.41
TPM3-217ENST00000504663 H3BQ85 93 aa6.22□□□□□ -1.41
TPM3-217ENST00000504663 SNCGO76070 127 aa6.22□□□□□ -1.41
TPM3-217ENST00000504663 KRTAP1-4P0C5Y4 121 aa6.22□□□□□ -1.41
TPM3-217ENST00000504663 NDUFV3P56181 108 aaKnown RBP6.22□□□□□ -1.41
TPM3-217ENST00000504663 DEFB105AQ8NG35 78 aa6.22□□□□□ -1.41
TPM3-217ENST00000504663 HERC2O95714 4834 aa6.21□□□□□ -1.41
TPM3-217ENST00000504663 TNXBP22105 4242 aa6.2□□□□□ -1.42
TPM3-217ENST00000504663 IGLV8-61A0A075B6I0 122 aa6.2□□□□□ -1.42
TPM3-217ENST00000504663 TRBV7-4A0A0J9YYF1 115 aa6.2□□□□□ -1.42
TPM3-217ENST00000504663 A0A1B0GV72 72 aa6.2□□□□□ -1.42
TPM3-217ENST00000504663 C14orf132Q9NPU4 83 aa6.2□□□□□ -1.42
TPM3-217ENST00000504663 LRP1Q07954 4544 aaKnown RBP6.19□□□□□ -1.42
TPM3-217ENST00000504663 ANAPC11Q9NYG5 84 aa6.19□□□□□ -1.42
TPM3-217ENST00000504663 LOC110117498A0A087WWA1 95 aa6.18□□□□□ -1.42
TPM3-217ENST00000504663 JMJD7-PLA2G4BH0Y9G9 81 aa6.18□□□□□ -1.42
TPM3-217ENST00000504663 Q6ZQT0 140 aa6.18□□□□□ -1.42
TPM3-217ENST00000504663 LAMTOR3Q9UHA4 124 aa6.17□□□□□ -1.42
TPM3-217ENST00000504663 ZNF706Q9Y5V0 76 aaPredicted RBP6.17□□□□□ -1.42
TPM3-217ENST00000504663 A0A087X002 238 aa6.16□□□□□ -1.42
TPM3-217ENST00000504663 A0A0G2JQZ4 141 aa6.16□□□□□ -1.42
TPM3-217ENST00000504663 SPINK6Q6UWN8 80 aa6.16□□□□□ -1.42
TPM3-217ENST00000504663 A0A1W2PNM2 257 aa6.15□□□□□ -1.42
TPM3-217ENST00000504663 RBM3P98179 157 aaKnown RBP6.15□□□□□ -1.42
TPM3-217ENST00000504663 KRTAP13-2Q52LG2 175 aa6.15□□□□□ -1.42
TPM3-217ENST00000504663 Q5VSD8 79 aa6.15□□□□□ -1.42
TPM3-217ENST00000504663 IGFL1Q6UW32 110 aa6.15□□□□□ -1.42
TPM3-217ENST00000504663 Q75L30 129 aa6.15□□□□□ -1.42
TPM3-217ENST00000504663 KRTAP4-8Q9BYQ9 185 aa6.15□□□□□ -1.42
TPM3-217ENST00000504663 CCKP06307 115 aa6.13□□□□□ -1.43
TPM3-217ENST00000504663 FAM229BQ4G0N7 80 aa6.12□□□□□ -1.43
TPM3-217ENST00000504663 SEC61BP60468 96 aaKnown RBP6.11□□□□□ -1.43
TPM3-217ENST00000504663 Q8N1X5 172 aa6.11□□□□□ -1.43
TPM3-217ENST00000504663 MYCBP2O75592 4640 aa6.1□□□□□ -1.43
TPM3-217ENST00000504663 ABCA13Q86UQ4 5058 aa6.1□□□□□ -1.43
TPM3-217ENST00000504663 IGLV9-49A0A0B4J1Y8 123 aa6.1□□□□□ -1.43
TPM3-217ENST00000504663 FAM240AA0A1B0GVK7 77 aa6.1□□□□□ -1.43
TPM3-217ENST00000504663 MOBPQ13875 183 aa6.1□□□□□ -1.43
TPM3-217ENST00000504663 XP32Q5T750 250 aa6.1□□□□□ -1.43
TPM3-217ENST00000504663 Q8NBF4 154 aa6.1□□□□□ -1.43
TPM3-217ENST00000504663 DSCR8Q96T75 97 aa6.1□□□□□ -1.43
TPM3-217ENST00000504663 K7ERU9 68 aa6.09□□□□□ -1.43
TPM3-217ENST00000504663 F8WEM9 126 aa6.08□□□□□ -1.44
TPM3-217ENST00000504663 PDE6GP18545 87 aa6.08□□□□□ -1.44
TPM3-217ENST00000504663 Q6JHZ5 121 aa6.08□□□□□ -1.44
TPM3-217ENST00000504663 Q6Q795 121 aa6.08□□□□□ -1.44
TPM3-217ENST00000504663 KRTAP4-5Q9BYR2 181 aa6.08□□□□□ -1.44
TPM3-217ENST00000504663 C9orf153Q5TBE3 101 aa6.07□□□□□ -1.44
TPM3-217ENST00000504663 LINC00846Q9NV44 126 aa6.07□□□□□ -1.44
TPM3-217ENST00000504663 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.06□□□□□ -1.44
TPM3-217ENST00000504663 CRYGAP11844 174 aa6.06□□□□□ -1.44
TPM3-217ENST00000504663 J3QR89 54 aa6.05□□□□□ -1.44
TPM3-217ENST00000504663 PRR26Q8N8Z3 221 aa6.05□□□□□ -1.44
TPM3-217ENST00000504663 SSBP3-AS1Q7Z2R9 100 aa6.04□□□□□ -1.44
TPM3-217ENST00000504663 KRTAP9-2Q9BYQ4 174 aa6.04□□□□□ -1.44
TPM3-217ENST00000504663 ACYP1P07311 99 aa6.03□□□□□ -1.44
TPM3-217ENST00000504663 VPS25Q9BRG1 176 aa6.03□□□□□ -1.44
TPM3-217ENST00000504663 TRBV7-7A0A0K0K1E9 115 aa6.02□□□□□ -1.45
TPM3-217ENST00000504663 KRTAP9-6A0A140TA67 174 aa6.01□□□□□ -1.45
TPM3-217ENST00000504663 A0A1B0GW54 56 aa6.01□□□□□ -1.45
TPM3-217ENST00000504663 FLG2Q5D862 2391 aaPredicted RBP6□□□□□ -1.45
TPM3-217ENST00000504663 A0A087WSZ3 146 aa6□□□□□ -1.45
TPM3-217ENST00000504663 KRTAP10-8P60410 259 aa6□□□□□ -1.45
TPM3-217ENST00000504663 CD164Q04900 197 aa6□□□□□ -1.45
TPM3-217ENST00000504663 Q6ZVQ6 151 aa6□□□□□ -1.45
TPM3-217ENST00000504663 MT1HL1P0DM35 61 aa5.99□□□□□ -1.45
TPM3-217ENST00000504663 Q96NJ1 140 aa5.99□□□□□ -1.45
TPM3-217ENST00000504663 HRCT1Q6UXD1 115 aa5.98□□□□□ -1.45
TPM3-217ENST00000504663 TYMSOSQ8TAI1 123 aa5.98□□□□□ -1.45
TPM3-217ENST00000504663 SEC61GP60059 68 aa5.97□□□□□ -1.45
TPM3-217ENST00000504663 MT-ATP8P03928 68 aa5.96□□□□□ -1.46
TPM3-217ENST00000504663 Q5XG85 94 aa5.96□□□□□ -1.46
TPM3-217ENST00000504663 LINC00472Q9H8W2 130 aa5.96□□□□□ -1.46
TPM3-217ENST00000504663 LINC00643Q86TS7 51 aa5.95□□□□□ -1.46
TPM3-217ENST00000504663 PCLOQ9Y6V0 5065 aa5.95□□□□□ -1.46
TPM3-217ENST00000504663 ASB16-AS1Q495Z4 193 aa5.94□□□□□ -1.46
TPM3-217ENST00000504663 LINC00304Q8N9R0 145 aa5.94□□□□□ -1.46
TPM3-217ENST00000504663 UBL5Q9BZL1 73 aa5.94□□□□□ -1.46
TPM3-217ENST00000504663 DSCR10P59022 87 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 94.2 ms