RNA–Protein interactions for RNA: ENST00000504243.5

TRAPPC13-205, Transcript of trafficking protein particle complex 13, humanhuman

TSL 5

Gene TRAPPC13, Length 643 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-205ENST00000504243 TJP1Q07157 1748 aa1.32□□□□□ -2.2
TRAPPC13-205ENST00000504243 TNCP24821 2201 aa1.31□□□□□ -2.2
TRAPPC13-205ENST00000504243 CACNA1CQ13936 2221 aa1.31□□□□□ -2.2
TRAPPC13-205ENST00000504243 ASCC3Q8N3C0 2202 aaKnown RBP1.31□□□□□ -2.2
TRAPPC13-205ENST00000504243 ETDCA0A1B0GVM5 59 aa1.31□□□□□ -2.2
TRAPPC13-205ENST00000504243 SMIM27A0A1W2PRY6 76 aa1.31□□□□□ -2.2
TRAPPC13-205ENST00000504243 H0YGX0 51 aa1.31□□□□□ -2.2
TRAPPC13-205ENST00000504243 UBE2DNLQ8IWF7 75 aa1.31□□□□□ -2.2
TRAPPC13-205ENST00000504243 RYR2Q92736 4967 aa1.31□□□□□ -2.2
TRAPPC13-205ENST00000504243 CREBBPQ92793 2442 aa1.31□□□□□ -2.2
TRAPPC13-205ENST00000504243 LRRC37AA6NMS7 1700 aa1.31□□□□□ -2.2
TRAPPC13-205ENST00000504243 PCNX1Q96RV3 2341 aa1.31□□□□□ -2.2
TRAPPC13-205ENST00000504243 WDR87Q6ZQQ6 2873 aa1.3□□□□□ -2.2
TRAPPC13-205ENST00000504243 CDH23Q9H251 3354 aa1.3□□□□□ -2.2
TRAPPC13-205ENST00000504243 NRAPQ86VF7 1730 aa1.3□□□□□ -2.2
TRAPPC13-205ENST00000504243 PAPPA2Q9BXP8 1791 aa1.3□□□□□ -2.2
TRAPPC13-205ENST00000504243 LINC00959A0A1B0GUT2 108 aa1.3□□□□□ -2.2
TRAPPC13-205ENST00000504243 CPSF4LA6NMK7 179 aaKnown RBP1.3□□□□□ -2.2
TRAPPC13-205ENST00000504243 LY6G6CO95867 125 aa1.3□□□□□ -2.2
TRAPPC13-205ENST00000504243 KCNQ1DNQ9H478 68 aa1.3□□□□□ -2.2
TRAPPC13-205ENST00000504243 NBEAQ8NFP9 2946 aa1.3□□□□□ -2.2
TRAPPC13-205ENST00000504243 KMT2CQ8NEZ4 4911 aaKnown RBP1.3□□□□□ -2.2
TRAPPC13-205ENST00000504243 ABCA1O95477 2261 aa1.29□□□□□ -2.2
TRAPPC13-205ENST00000504243 CELSR1Q9NYQ6 3014 aa1.29□□□□□ -2.2
TRAPPC13-205ENST00000504243 MTORP42345 2549 aa1.29□□□□□ -2.2
TRAPPC13-205ENST00000504243 USP9YO00507 2555 aaPredicted RBP1.29□□□□□ -2.2
TRAPPC13-205ENST00000504243 ABCA13Q86UQ4 5058 aa1.29□□□□□ -2.2
TRAPPC13-205ENST00000504243 UTP20O75691 2785 aaKnown RBP1.29□□□□□ -2.2
TRAPPC13-205ENST00000504243 G3V318 75 aa1.29□□□□□ -2.2
TRAPPC13-205ENST00000504243 M0R1W7 72 aa1.29□□□□□ -2.2
TRAPPC13-205ENST00000504243 RPL37P61927 97 aaKnown RBP1.29□□□□□ -2.2
TRAPPC13-205ENST00000504243 USMG5Q96IX5 58 aa1.29□□□□□ -2.2
TRAPPC13-205ENST00000504243 HERC1Q15751 4861 aa1.29□□□□□ -2.2
TRAPPC13-205ENST00000504243 F5P12259 2224 aa1.29□□□□□ -2.2
TRAPPC13-205ENST00000504243 DNAH14Q0VDD8 3507 aa1.29□□□□□ -2.2
TRAPPC13-205ENST00000504243 TULP4Q9NRJ4 1543 aa1.29□□□□□ -2.2
TRAPPC13-205ENST00000504243 NWD1Q149M9 1564 aa1.29□□□□□ -2.2
TRAPPC13-205ENST00000504243 NRXN3Q9Y4C0 1643 aa1.29□□□□□ -2.2
TRAPPC13-205ENST00000504243 FAM208AQ9UK61 1670 aaKnown RBP1.29□□□□□ -2.2
TRAPPC13-205ENST00000504243 CRYBG3Q68DQ2 2970 aa1.29□□□□□ -2.2
TRAPPC13-205ENST00000504243 LAMA3Q16787 3333 aa1.28□□□□□ -2.2
TRAPPC13-205ENST00000504243 VPS13AQ96RL7 3174 aa1.28□□□□□ -2.2
TRAPPC13-205ENST00000504243 DEFB131BA0A096LNP1 70 aa1.28□□□□□ -2.2
TRAPPC13-205ENST00000504243 I3L3M4 83 aa1.28□□□□□ -2.2
TRAPPC13-205ENST00000504243 CRIPTQ9P021 101 aa1.28□□□□□ -2.2
TRAPPC13-205ENST00000504243 TRPM2O94759 1503 aa1.28□□□□□ -2.2
TRAPPC13-205ENST00000504243 KIF21BO75037 1637 aa1.28□□□□□ -2.2
TRAPPC13-205ENST00000504243 PTPRZ1P23471 2315 aaPredicted RBP1.28□□□□□ -2.2
TRAPPC13-205ENST00000504243 FRYQ5TBA9 3013 aa1.28□□□□□ -2.2
TRAPPC13-205ENST00000504243 QSER1Q2KHR3 1735 aa1.27□□□□□ -2.21
TRAPPC13-205ENST00000504243 ZNF831Q5JPB2 1677 aa1.27□□□□□ -2.21
TRAPPC13-205ENST00000504243 NFAT5O94916 1531 aa1.27□□□□□ -2.21
TRAPPC13-205ENST00000504243 IGIPA6NJ69 53 aa1.27□□□□□ -2.21
TRAPPC13-205ENST00000504243 CELSR2Q9HCU4 2923 aa1.27□□□□□ -2.21
TRAPPC13-205ENST00000504243 NF1P21359 2839 aa1.27□□□□□ -2.21
TRAPPC13-205ENST00000504243 TENM2Q9NT68 2774 aa1.27□□□□□ -2.21
TRAPPC13-205ENST00000504243 AHCTF1Q8WYP5 2266 aa1.26□□□□□ -2.21
TRAPPC13-205ENST00000504243 KNTC1P50748 2209 aa1.26□□□□□ -2.21
TRAPPC13-205ENST00000504243 LINC01546A6NGU7 62 aa1.26□□□□□ -2.21
TRAPPC13-205ENST00000504243 PIGYQ3MUY2 71 aa1.26□□□□□ -2.21
TRAPPC13-205ENST00000504243 WDFY3Q8IZQ1 3526 aa1.26□□□□□ -2.21
TRAPPC13-205ENST00000504243 SPTA1P02549 2419 aa1.26□□□□□ -2.21
TRAPPC13-205ENST00000504243 EP300Q09472 2414 aaPredicted RBP1.26□□□□□ -2.21
TRAPPC13-205ENST00000504243 DOT1LQ8TEK3 1739 aa1.26□□□□□ -2.21
TRAPPC13-205ENST00000504243 URB1O60287 2271 aaKnown RBP1.26□□□□□ -2.21
TRAPPC13-205ENST00000504243 SLIT1O75093 1534 aa1.25□□□□□ -2.21
TRAPPC13-205ENST00000504243 MYO15AQ9UKN7 3530 aa1.25□□□□□ -2.21
TRAPPC13-205ENST00000504243 SPTBN2O15020 2390 aa1.25□□□□□ -2.21
TRAPPC13-205ENST00000504243 PLXNB2O15031 1838 aa1.25□□□□□ -2.21
TRAPPC13-205ENST00000504243 COX6B1P14854 86 aa1.25□□□□□ -2.21
TRAPPC13-205ENST00000504243 GOLGA4Q13439 2230 aaKnown RBP1.25□□□□□ -2.21
TRAPPC13-205ENST00000504243 CDC42BPAQ5VT25 1732 aa1.25□□□□□ -2.21
TRAPPC13-205ENST00000504243 SSC5DA1L4H1 1573 aa1.25□□□□□ -2.21
TRAPPC13-205ENST00000504243 DDX60LQ5H9U9 1706 aaKnown RBP1.24□□□□□ -2.21
TRAPPC13-205ENST00000504243 HIVEP3Q5T1R4 2406 aa1.24□□□□□ -2.21
TRAPPC13-205ENST00000504243 CCL22O00626 93 aa1.24□□□□□ -2.21
TRAPPC13-205ENST00000504243 SNRPGP62308 76 aaKnown RBP1.24□□□□□ -2.21
TRAPPC13-205ENST00000504243 COX6B2Q6YFQ2 88 aa1.24□□□□□ -2.21
TRAPPC13-205ENST00000504243 TMEM167BQ9NRX6 74 aa1.24□□□□□ -2.21
TRAPPC13-205ENST00000504243 TLN2Q9Y4G6 2542 aa1.24□□□□□ -2.21
TRAPPC13-205ENST00000504243 HERC2O95714 4834 aa1.24□□□□□ -2.21
TRAPPC13-205ENST00000504243 ZANQ9Y493 2812 aa1.24□□□□□ -2.21
TRAPPC13-205ENST00000504243 DMDP11532 3685 aa1.24□□□□□ -2.21
TRAPPC13-205ENST00000504243 FRYLO94915 3013 aa1.23□□□□□ -2.21
TRAPPC13-205ENST00000504243 CADP27708 2225 aa1.23□□□□□ -2.21
TRAPPC13-205ENST00000504243 PRB3Q04118 309 aaPredicted RBP1.23□□□□□ -2.21
TRAPPC13-205ENST00000504243 TIMM8BQ9Y5J9 83 aaPredicted RBP1.23□□□□□ -2.21
TRAPPC13-205ENST00000504243 ATP7AQ04656 1500 aa1.23□□□□□ -2.21
TRAPPC13-205ENST00000504243 AKAP13Q12802 2813 aa1.23□□□□□ -2.21
TRAPPC13-205ENST00000504243 TGP01266 2768 aa1.23□□□□□ -2.21
TRAPPC13-205ENST00000504243 LOC400499M0QZD8 3231 aa1.23□□□□□ -2.21
TRAPPC13-205ENST00000504243 DEPDC5O75140 1603 aa1.22□□□□□ -2.21
TRAPPC13-205ENST00000504243 SAMD9LQ8IVG5 1584 aa1.22□□□□□ -2.21
TRAPPC13-205ENST00000504243 ASXL3Q9C0F0 2248 aa1.22□□□□□ -2.21
TRAPPC13-205ENST00000504243 TP53AIP1Q9HCN2 124 aa1.22□□□□□ -2.21
TRAPPC13-205ENST00000504243 ITPR1Q14643 2758 aa1.22□□□□□ -2.21
TRAPPC13-205ENST00000504243 ZZEF1O43149 2961 aa1.22□□□□□ -2.21
TRAPPC13-205ENST00000504243 IGF2RP11717 2491 aa1.22□□□□□ -2.21
TRAPPC13-205ENST00000504243 K7EQZ3 153 aa1.21□□□□□ -2.22
TRAPPC13-205ENST00000504243 SPINK4O60575 86 aa1.21□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms