RNA–Protein interactions for RNA: ENST00000504178.1

SYNPO2-205, Transcript of synaptopodin 2, humanhuman

TSL 1 (best)

Gene SYNPO2, Length 6,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-205ENST00000504178 LINC00483Q53H64 154 aa4.43□□□□□ -1.7
SYNPO2-205ENST00000504178 LAMA5O15230 3695 aa4.42□□□□□ -1.7
SYNPO2-205ENST00000504178 A0A1B0GU33 70 aa4.42□□□□□ -1.7
SYNPO2-205ENST00000504178 C2CD3Q4AC94 2353 aa4.42□□□□□ -1.7
SYNPO2-205ENST00000504178 BOD1L1Q8NFC6 3051 aa4.42□□□□□ -1.7
SYNPO2-205ENST00000504178 COL12A1Q99715 3063 aa4.42□□□□□ -1.7
SYNPO2-205ENST00000504178 CEP295Q9C0D2 2601 aa4.42□□□□□ -1.7
SYNPO2-205ENST00000504178 FN1P02751 2386 aaKnown RBP4.42□□□□□ -1.7
SYNPO2-205ENST00000504178 Q1T7F1 81 aa4.41□□□□□ -1.7
SYNPO2-205ENST00000504178 MMP24-AS1A0A0U1RRL7 71 aa4.41□□□□□ -1.7
SYNPO2-205ENST00000504178 Q5VSD8 79 aa4.39□□□□□ -1.71
SYNPO2-205ENST00000504178 MUC3AQ02505 3323 aa4.39□□□□□ -1.71
SYNPO2-205ENST00000504178 LUZP6Q538Z0 58 aa4.39□□□□□ -1.71
SYNPO2-205ENST00000504178 TLN1Q9Y490 2541 aaKnown RBP4.39□□□□□ -1.71
SYNPO2-205ENST00000504178 CSAG1Q6PB30 78 aa4.38□□□□□ -1.71
SYNPO2-205ENST00000504178 ACANP16112 2415 aa4.38□□□□□ -1.71
SYNPO2-205ENST00000504178 ABCA12Q86UK0 2595 aa4.38□□□□□ -1.71
SYNPO2-205ENST00000504178 Q8NDZ9 215 aa4.38□□□□□ -1.71
SYNPO2-205ENST00000504178 SPRR1AP35321 89 aa4.37□□□□□ -1.71
SYNPO2-205ENST00000504178 Q8N9P0 234 aaPredicted RBP4.37□□□□□ -1.71
SYNPO2-205ENST00000504178 Q75L30 129 aa4.37□□□□□ -1.71
SYNPO2-205ENST00000504178 Q5W150 140 aa4.37□□□□□ -1.71
SYNPO2-205ENST00000504178 DMAC1Q96GE9 116 aa4.36□□□□□ -1.71
SYNPO2-205ENST00000504178 DMXL1Q9Y485 3027 aa4.36□□□□□ -1.71
SYNPO2-205ENST00000504178 FRYQ5TBA9 3013 aa4.35□□□□□ -1.71
SYNPO2-205ENST00000504178 SEC61BP60468 96 aaKnown RBP4.35□□□□□ -1.71
SYNPO2-205ENST00000504178 SETD2Q9BYW2 2564 aaPredicted RBP4.35□□□□□ -1.71
SYNPO2-205ENST00000504178 CR1P17927 2039 aa4.34□□□□□ -1.71
SYNPO2-205ENST00000504178 TRANK1O15050 2925 aa4.34□□□□□ -1.71
SYNPO2-205ENST00000504178 LCE6AA0A183 80 aa4.34□□□□□ -1.71
SYNPO2-205ENST00000504178 KRTAP1-5Q9BYS1 174 aa4.34□□□□□ -1.72
SYNPO2-205ENST00000504178 SPRR1BP22528 89 aa4.33□□□□□ -1.72
SYNPO2-205ENST00000504178 KRTAP10-1P60331 282 aa4.33□□□□□ -1.72
SYNPO2-205ENST00000504178 LINC01558Q9Y6Z2 57 aa4.33□□□□□ -1.72
SYNPO2-205ENST00000504178 LOC400499M0QZD8 3231 aa4.33□□□□□ -1.72
SYNPO2-205ENST00000504178 SPINK7P58062 85 aa4.33□□□□□ -1.72
SYNPO2-205ENST00000504178 LINC00472Q9H8W2 130 aa4.32□□□□□ -1.72
SYNPO2-205ENST00000504178 NBPF19A0A087WUL8 3843 aa4.32□□□□□ -1.72
SYNPO2-205ENST00000504178 F8P00451 2351 aa4.32□□□□□ -1.72
SYNPO2-205ENST00000504178 HECTD1Q9ULT8 2610 aa4.32□□□□□ -1.72
SYNPO2-205ENST00000504178 KRTAP10-2P60368 255 aa4.32□□□□□ -1.72
SYNPO2-205ENST00000504178 PKD1L2Q7Z442 2459 aa4.32□□□□□ -1.72
SYNPO2-205ENST00000504178 ATMQ13315 3056 aa4.32□□□□□ -1.72
SYNPO2-205ENST00000504178 DCHS1Q96JQ0 3298 aa4.31□□□□□ -1.72
SYNPO2-205ENST00000504178 MTORP42345 2549 aa4.31□□□□□ -1.72
SYNPO2-205ENST00000504178 R4GN34 69 aa4.31□□□□□ -1.72
SYNPO2-205ENST00000504178 CRYBG3Q68DQ2 2970 aa4.31□□□□□ -1.72
SYNPO2-205ENST00000504178 EPG5Q9HCE0 2579 aa4.3□□□□□ -1.72
SYNPO2-205ENST00000504178 KRTAP26-1Q6PEX3 210 aa4.3□□□□□ -1.72
SYNPO2-205ENST00000504178 AKAP13Q12802 2813 aa4.29□□□□□ -1.72
SYNPO2-205ENST00000504178 DMXL2Q8TDJ6 3036 aa4.29□□□□□ -1.72
SYNPO2-205ENST00000504178 RELNP78509 3460 aa4.29□□□□□ -1.72
SYNPO2-205ENST00000504178 MYO9AB2RTY4 2548 aa4.28□□□□□ -1.72
SYNPO2-205ENST00000504178 FLNBO75369 2602 aaKnown RBP4.28□□□□□ -1.72
SYNPO2-205ENST00000504178 DSPP15924 2871 aaKnown RBP4.26□□□□□ -1.73
SYNPO2-205ENST00000504178 ADGRG4Q8IZF6 3080 aa4.26□□□□□ -1.73
SYNPO2-205ENST00000504178 OXTP01178 125 aa4.26□□□□□ -1.73
SYNPO2-205ENST00000504178 CFAP46Q8IYW2 2715 aa4.25□□□□□ -1.73
SYNPO2-205ENST00000504178 USP9XQ93008 2570 aaPredicted RBP4.25□□□□□ -1.73
SYNPO2-205ENST00000504178 FP248Q71RG6 208 aaPredicted RBP4.25□□□□□ -1.73
SYNPO2-205ENST00000504178 M0QZ58 72 aa4.25□□□□□ -1.73
SYNPO2-205ENST00000504178 Q5VV11 94 aa4.25□□□□□ -1.73
SYNPO2-205ENST00000504178 Q5XG85 94 aa4.24□□□□□ -1.73
SYNPO2-205ENST00000504178 PRAC1Q96KF2 57 aa4.24□□□□□ -1.73
SYNPO2-205ENST00000504178 H1FX-AS1Q4G0G2 97 aa4.24□□□□□ -1.73
SYNPO2-205ENST00000504178 CYSTM1Q9H1C7 97 aa4.23□□□□□ -1.73
SYNPO2-205ENST00000504178 Q6ZR54 194 aa4.22□□□□□ -1.73
SYNPO2-205ENST00000504178 ADM2Q7Z4H4 148 aa4.22□□□□□ -1.73
SYNPO2-205ENST00000504178 LRBAP50851 2863 aa4.22□□□□□ -1.73
SYNPO2-205ENST00000504178 PANO1I0J062 215 aa4.22□□□□□ -1.73
SYNPO2-205ENST00000504178 ROMO1P60602 79 aa4.22□□□□□ -1.73
SYNPO2-205ENST00000504178 RPL37P61927 97 aaKnown RBP4.21□□□□□ -1.74
SYNPO2-205ENST00000504178 USP9YO00507 2555 aaPredicted RBP4.2□□□□□ -1.74
SYNPO2-205ENST00000504178 MAP1AP78559 2803 aaPredicted RBP4.2□□□□□ -1.74
SYNPO2-205ENST00000504178 SPENQ96T58 3664 aaKnown RBP4.19□□□□□ -1.74
SYNPO2-205ENST00000504178 USP24Q9UPU5 2620 aa4.19□□□□□ -1.74
SYNPO2-205ENST00000504178 A0A087X002 238 aa4.18□□□□□ -1.74
SYNPO2-205ENST00000504178 CSMD1Q96PZ7 3565 aa4.18□□□□□ -1.74
SYNPO2-205ENST00000504178 BAHCC1Q9P281 2608 aa4.18□□□□□ -1.74
SYNPO2-205ENST00000504178 CENPEQ02224 2701 aa4.18□□□□□ -1.74
SYNPO2-205ENST00000504178 KRTAP4-16G5E9R7 235 aaPredicted RBP4.18□□□□□ -1.74
SYNPO2-205ENST00000504178 HELZ2Q9BYK8 2649 aaKnown RBP4.18□□□□□ -1.74
SYNPO2-205ENST00000504178 SMG1Q96Q15 3661 aaKnown RBP4.17□□□□□ -1.74
SYNPO2-205ENST00000504178 SPATA8Q6RVD6 105 aa4.16□□□□□ -1.74
SYNPO2-205ENST00000504178 A0A0A0MQY5 61 aa4.16□□□□□ -1.74
SYNPO2-205ENST00000504178 ITPR3Q14573 2671 aa4.15□□□□□ -1.74
SYNPO2-205ENST00000504178 TEP1Q99973 2627 aaKnown RBP4.15□□□□□ -1.75
SYNPO2-205ENST00000504178 H3BS24 57 aa4.14□□□□□ -1.75
SYNPO2-205ENST00000504178 KRTAP29-1A8MX34 341 aaPredicted RBP4.13□□□□□ -1.75
SYNPO2-205ENST00000504178 KALRNO60229 2985 aa4.13□□□□□ -1.75
SYNPO2-205ENST00000504178 ASH1LQ9NR48 2969 aaKnown RBP4.13□□□□□ -1.75
SYNPO2-205ENST00000504178 RPS29P62273 56 aaKnown RBP4.12□□□□□ -1.75
SYNPO2-205ENST00000504178 CSMD2Q7Z408 3487 aa4.12□□□□□ -1.75
SYNPO2-205ENST00000504178 NOTCH2NLQ7Z3S9 236 aa4.11□□□□□ -1.75
SYNPO2-205ENST00000504178 KRTAP11-1Q8IUC1 163 aa4.11□□□□□ -1.75
SYNPO2-205ENST00000504178 FLNAP21333 2647 aaKnown RBP4.11□□□□□ -1.75
SYNPO2-205ENST00000504178 ASB16-AS1Q495Z4 193 aa4.1□□□□□ -1.75
SYNPO2-205ENST00000504178 Q6ZRN7 208 aaPredicted RBP4.1□□□□□ -1.75
SYNPO2-205ENST00000504178 SVEP1Q4LDE5 3571 aa4.09□□□□□ -1.75
SYNPO2-205ENST00000504178 ZZEF1O43149 2961 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms