RNA–Protein interactions for RNA: ENST00000503982.1

LSM6-203, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 820 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-203ENST00000503982 LAMTOR3Q9UHA4 124 aa12.34□□□□□ -0.43
LSM6-203ENST00000503982 TSTD3H0UI37 97 aa12.33□□□□□ -0.44
LSM6-203ENST00000503982 SEC61BP60468 96 aaKnown RBP12.32□□□□□ -0.44
LSM6-203ENST00000503982 DEFB105AQ8NG35 78 aa12.32□□□□□ -0.44
LSM6-203ENST00000503982 H0YGX0 51 aa12.3□□□□□ -0.44
LSM6-203ENST00000503982 ASB16-AS1Q495Z4 193 aa12.3□□□□□ -0.44
LSM6-203ENST00000503982 LINC01547P58512 204 aaPredicted RBP12.29□□□□□ -0.44
LSM6-203ENST00000503982 LIMD2Q9BT23 127 aa12.29□□□□□ -0.44
LSM6-203ENST00000503982 TEX49A0A1B0GTD5 131 aa12.28□□□□□ -0.44
LSM6-203ENST00000503982 hADV29S1A0JD25 119 aa12.28□□□□□ -0.44
LSM6-203ENST00000503982 M0R143 59 aa12.28□□□□□ -0.44
LSM6-203ENST00000503982 LCE2AQ5TA79 106 aaPredicted RBP12.28□□□□□ -0.44
LSM6-203ENST00000503982 H7C2G1 150 aa12.27□□□□□ -0.45
LSM6-203ENST00000503982 Q1RN00 199 aa12.27□□□□□ -0.45
LSM6-203ENST00000503982 A0A1B0GX51 115 aa12.25□□□□□ -0.45
LSM6-203ENST00000503982 K7ERJ3 54 aa12.25□□□□□ -0.45
LSM6-203ENST00000503982 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.24□□□□□ -0.45
LSM6-203ENST00000503982 TRIAP1O43715 76 aa12.23□□□□□ -0.45
LSM6-203ENST00000503982 PPDPFLQ8WWR9 84 aa12.23□□□□□ -0.45
LSM6-203ENST00000503982 Q6ZQY7 126 aa12.21□□□□□ -0.45
LSM6-203ENST00000503982 SMIM29Q86T20 159 aa12.21□□□□□ -0.45
LSM6-203ENST00000503982 SNCGO76070 127 aa12.19□□□□□ -0.46
LSM6-203ENST00000503982 XP32Q5T750 250 aa12.19□□□□□ -0.46
LSM6-203ENST00000503982 OCIAD2Q56VL3 154 aa12.18□□□□□ -0.46
LSM6-203ENST00000503982 FAM218AQ96MZ4 157 aa12.18□□□□□ -0.46
LSM6-203ENST00000503982 KRTAP9-2Q9BYQ4 174 aa12.18□□□□□ -0.46
LSM6-203ENST00000503982 COX6CP09669 75 aa12.16□□□□□ -0.46
LSM6-203ENST00000503982 C9orf92A6NGG3 77 aa12.15□□□□□ -0.46
LSM6-203ENST00000503982 KRTAP4-1Q9BYQ7 146 aa12.15□□□□□ -0.46
LSM6-203ENST00000503982 PSMB2P49721 201 aa12.13□□□□□ -0.47
LSM6-203ENST00000503982 GHRHP01286 108 aa12.12□□□□□ -0.47
LSM6-203ENST00000503982 CD164Q04900 197 aa12.12□□□□□ -0.47
LSM6-203ENST00000503982 IGLV8-61A0A075B6I0 122 aa12.1□□□□□ -0.47
LSM6-203ENST00000503982 CLEC2BQ92478 149 aa12.08□□□□□ -0.48
LSM6-203ENST00000503982 A0A0G2JQZ4 141 aa12.07□□□□□ -0.48
LSM6-203ENST00000503982 H3BQ85 93 aa12.07□□□□□ -0.48
LSM6-203ENST00000503982 F8WEM9 126 aa12.06□□□□□ -0.48
LSM6-203ENST00000503982 LST1O00453 97 aa12.05□□□□□ -0.48
LSM6-203ENST00000503982 TRACP01848 142 aa12.05□□□□□ -0.48
LSM6-203ENST00000503982 PCOTHQ58A44 107 aa12.04□□□□□ -0.48
LSM6-203ENST00000503982 DNAL4O96015 105 aa12.02□□□□□ -0.49
LSM6-203ENST00000503982 Q6JHZ5 121 aa12.02□□□□□ -0.49
LSM6-203ENST00000503982 SNHG12Q9BXW3 62 aa12.01□□□□□ -0.49
LSM6-203ENST00000503982 Q5XG85 94 aa12□□□□□ -0.49
LSM6-203ENST00000503982 SCGB1C2P0DMR2 95 aa11.99□□□□□ -0.49
LSM6-203ENST00000503982 C1orf195Q5TG92 126 aa11.99□□□□□ -0.49
LSM6-203ENST00000503982 ORMDL1Q9P0S3 153 aa11.99□□□□□ -0.49
LSM6-203ENST00000503982 TCL1BO95988 128 aa11.98□□□□□ -0.49
LSM6-203ENST00000503982 NDUFV3P56181 108 aaKnown RBP11.97□□□□□ -0.49
LSM6-203ENST00000503982 BATFQ16520 125 aa11.97□□□□□ -0.49
LSM6-203ENST00000503982 LYRM7Q5U5X0 104 aa11.97□□□□□ -0.49
LSM6-203ENST00000503982 TMEM256-PLSCR3K7ERE1 68 aa11.96□□□□□ -0.49
LSM6-203ENST00000503982 IGFL1Q6UW32 110 aa11.94□□□□□ -0.5
LSM6-203ENST00000503982 TAX1BP3O14907 124 aa11.93□□□□□ -0.5
LSM6-203ENST00000503982 TRBV20-1A0A075B6N2 111 aa11.92□□□□□ -0.5
LSM6-203ENST00000503982 C9orf118A6NHY6 69 aa11.92□□□□□ -0.5
LSM6-203ENST00000503982 UBE2V1Q13404 147 aa11.92□□□□□ -0.5
LSM6-203ENST00000503982 ATXN8Q156A1 80 aa11.92□□□□□ -0.5
LSM6-203ENST00000503982 FABP2P12104 132 aa11.91□□□□□ -0.5
LSM6-203ENST00000503982 NAA38Q9BRA0 125 aaKnown RBP11.91□□□□□ -0.5
LSM6-203ENST00000503982 Q6Q795 121 aa11.9□□□□□ -0.5
LSM6-203ENST00000503982 H3BUT2 72 aa11.89□□□□□ -0.51
LSM6-203ENST00000503982 H3BMG7 143 aa11.87□□□□□ -0.51
LSM6-203ENST00000503982 A0A1W2PPM0 123 aa11.85□□□□□ -0.51
LSM6-203ENST00000503982 COL5A1-AS1Q5SY13 56 aa11.85□□□□□ -0.51
LSM6-203ENST00000503982 TRBV7-7A0A0K0K1E9 115 aa11.84□□□□□ -0.51
LSM6-203ENST00000503982 RPL37P61927 97 aaKnown RBP11.84□□□□□ -0.51
LSM6-203ENST00000503982 KRTAP9-6A0A140TA67 174 aa11.83□□□□□ -0.52
LSM6-203ENST00000503982 TEN1Q86WV5 123 aa11.82□□□□□ -0.52
LSM6-203ENST00000503982 BAALC-AS2P0C853 105 aa11.81□□□□□ -0.52
LSM6-203ENST00000503982 LCE2CQ5TA81 110 aa11.81□□□□□ -0.52
LSM6-203ENST00000503982 ANKRD29Q8N6D5 301 aa11.79□□□□□ -0.52
LSM6-203ENST00000503982 TRBV7-4A0A0J9YYF1 115 aa11.77□□□□□ -0.53
LSM6-203ENST00000503982 KRTAP19-2Q3LHN2 52 aa11.75□□□□□ -0.53
LSM6-203ENST00000503982 COX6B2Q6YFQ2 88 aa11.75□□□□□ -0.53
LSM6-203ENST00000503982 MT1HP80294 61 aa11.74□□□□□ -0.53
LSM6-203ENST00000503982 A0A1W2PNM2 257 aa11.73□□□□□ -0.53
LSM6-203ENST00000503982 PCP4L1A6NKN8 68 aa11.73□□□□□ -0.53
LSM6-203ENST00000503982 RBM3P98179 157 aaKnown RBP11.73□□□□□ -0.53
LSM6-203ENST00000503982 SS18L2Q9UHA2 77 aa11.73□□□□□ -0.53
LSM6-203ENST00000503982 C9JAW5 83 aa11.72□□□□□ -0.53
LSM6-203ENST00000503982 JMJD7-PLA2G4BH0Y9G9 81 aa11.72□□□□□ -0.53
LSM6-203ENST00000503982 H3BT86 120 aa11.72□□□□□ -0.53
LSM6-203ENST00000503982 OBSCN-AS1Q96MR7 158 aa11.71□□□□□ -0.53
LSM6-203ENST00000503982 LCE2DQ5TA82 110 aaPredicted RBP11.7□□□□□ -0.54
LSM6-203ENST00000503982 M0R2T5 61 aa11.69□□□□□ -0.54
LSM6-203ENST00000503982 SPCS1Q9Y6A9 102 aa11.69□□□□□ -0.54
LSM6-203ENST00000503982 DSCR8Q96T75 97 aa11.68□□□□□ -0.54
LSM6-203ENST00000503982 ATP11AUNQ6ZP68 121 aa11.67□□□□□ -0.54
LSM6-203ENST00000503982 A0A087WSZ3 146 aa11.66□□□□□ -0.54
LSM6-203ENST00000503982 CCKP06307 115 aa11.66□□□□□ -0.54
LSM6-203ENST00000503982 LOC110117498A0A087WWA1 95 aa11.65□□□□□ -0.54
LSM6-203ENST00000503982 C21orf62-AS1Q17RA5 79 aa11.65□□□□□ -0.54
LSM6-203ENST00000503982 PDE6GP18545 87 aa11.64□□□□□ -0.55
LSM6-203ENST00000503982 A0A1B0GV72 72 aa11.63□□□□□ -0.55
LSM6-203ENST00000503982 A0A1B0GW54 56 aa11.63□□□□□ -0.55
LSM6-203ENST00000503982 Q96NJ1 140 aa11.62□□□□□ -0.55
LSM6-203ENST00000503982 K7EP34 96 aa11.61□□□□□ -0.55
LSM6-203ENST00000503982 Q6ZQT0 140 aa11.6□□□□□ -0.55
LSM6-203ENST00000503982 Q75L30 129 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms