RNA–Protein interactions for RNA: ENST00000503274.1

NIPBL-203, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 5

Gene NIPBL, Length 789 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-203ENST00000503274 LINC00337Q8N6G1 96 aa2.44□□□□□ -2.02
NIPBL-203ENST00000503274 CHCHD1Q96BP2 118 aaKnown RBP2.44□□□□□ -2.02
NIPBL-203ENST00000503274 MYMXA0A1B0GTQ4 84 aa2.43□□□□□ -2.02
NIPBL-203ENST00000503274 ETDCA0A1B0GVM5 59 aa2.43□□□□□ -2.02
NIPBL-203ENST00000503274 APOC3P02656 99 aa2.43□□□□□ -2.02
NIPBL-203ENST00000503274 IFITM2Q01629 132 aa2.43□□□□□ -2.02
NIPBL-203ENST00000503274 PMCHL1Q16048 86 aa2.43□□□□□ -2.02
NIPBL-203ENST00000503274 TPRXLQ17RH7 258 aa2.43□□□□□ -2.02
NIPBL-203ENST00000503274 FP248Q71RG6 208 aaPredicted RBP2.43□□□□□ -2.02
NIPBL-203ENST00000503274 BOD1L2Q8IYS8 172 aa2.43□□□□□ -2.02
NIPBL-203ENST00000503274 IFI27L1Q96BM0 104 aa2.43□□□□□ -2.02
NIPBL-203ENST00000503274 MIEN1Q9BRT3 115 aa2.43□□□□□ -2.02
NIPBL-203ENST00000503274 NDUFA12Q9UI09 145 aa2.43□□□□□ -2.02
NIPBL-203ENST00000503274 IGHV6-1A0A0B4J1U7 121 aa2.42□□□□□ -2.02
NIPBL-203ENST00000503274 HSBP1O75506 76 aa2.42□□□□□ -2.02
NIPBL-203ENST00000503274 SPINK1P00995 79 aa2.42□□□□□ -2.02
NIPBL-203ENST00000503274 SMIM13P0DJ93 91 aa2.42□□□□□ -2.02
NIPBL-203ENST00000503274 SPRR4Q96PI1 79 aa2.42□□□□□ -2.02
NIPBL-203ENST00000503274 RETNLBQ9BQ08 111 aa2.42□□□□□ -2.02
NIPBL-203ENST00000503274 KCNQ1DNQ9H478 68 aa2.42□□□□□ -2.02
NIPBL-203ENST00000503274 FAT4Q6V0I7 4981 aa2.41□□□□□ -2.02
NIPBL-203ENST00000503274 PLNP26678 52 aa2.41□□□□□ -2.02
NIPBL-203ENST00000503274 HINT1P49773 126 aaPredicted RBP2.41□□□□□ -2.02
NIPBL-203ENST00000503274 JOSD1Q15040 202 aaPredicted RBP2.41□□□□□ -2.02
NIPBL-203ENST00000503274 FAM19A2Q8N3H0 131 aa2.41□□□□□ -2.02
NIPBL-203ENST00000503274 C3orf22Q8N5N4 141 aa2.41□□□□□ -2.02
NIPBL-203ENST00000503274 SMCR5Q8TEV8 140 aa2.41□□□□□ -2.02
NIPBL-203ENST00000503274 HSPB8Q9UJY1 196 aa2.41□□□□□ -2.02
NIPBL-203ENST00000503274 MUC17Q685J3 4493 aa2.4□□□□□ -2.02
NIPBL-203ENST00000503274 TRBV10-3A0A0K0K1G6 114 aa2.4□□□□□ -2.03
NIPBL-203ENST00000503274 TRBV10-2A0A0K0K1G8 114 aa2.4□□□□□ -2.03
NIPBL-203ENST00000503274 NCR3O14931 201 aa2.4□□□□□ -2.03
NIPBL-203ENST00000503274 LEPROTO15243 131 aa2.4□□□□□ -2.03
NIPBL-203ENST00000503274 LEPROTL1O95214 131 aa2.4□□□□□ -2.03
NIPBL-203ENST00000503274 DDTP30046 118 aa2.4□□□□□ -2.03
NIPBL-203ENST00000503274 SPRR1AP35321 89 aa2.4□□□□□ -2.03
NIPBL-203ENST00000503274 S100A7L2Q5SY68 101 aa2.4□□□□□ -2.03
NIPBL-203ENST00000503274 SSBP3-AS1Q7Z2R9 100 aa2.4□□□□□ -2.03
NIPBL-203ENST00000503274 DAND5Q8N907 189 aa2.4□□□□□ -2.03
NIPBL-203ENST00000503274 LOC107984156A0A0G2JMH3 177 aa2.39□□□□□ -2.03
NIPBL-203ENST00000503274 J3QQQ9 107 aa2.39□□□□□ -2.03
NIPBL-203ENST00000503274 SLC25A20O43772 301 aa2.39□□□□□ -2.03
NIPBL-203ENST00000503274 DPM2O94777 84 aa2.39□□□□□ -2.03
NIPBL-203ENST00000503274 NDUFC2O95298 119 aa2.39□□□□□ -2.03
NIPBL-203ENST00000503274 RPS29P62273 56 aaKnown RBP2.39□□□□□ -2.03
NIPBL-203ENST00000503274 ARL17AQ8IVW1 177 aa2.39□□□□□ -2.03
NIPBL-203ENST00000503274 Q8NDZ9 215 aa2.39□□□□□ -2.03
NIPBL-203ENST00000503274 SPANXB1Q9NS25 103 aaPredicted RBP2.39□□□□□ -2.03
NIPBL-203ENST00000503274 IGKCP01834 107 aa2.38□□□□□ -2.03
NIPBL-203ENST00000503274 Q6ZRX8 168 aa2.38□□□□□ -2.03
NIPBL-203ENST00000503274 SLC7A5P1Q8MH63 180 aa2.38□□□□□ -2.03
NIPBL-203ENST00000503274 TRAV23DV6A0A075B6W5 121 aa2.37□□□□□ -2.03
NIPBL-203ENST00000503274 TRGC2P03986 189 aa2.37□□□□□ -2.03
NIPBL-203ENST00000503274 FABP4P15090 132 aa2.37□□□□□ -2.03
NIPBL-203ENST00000503274 KRTAP21-2Q3LI59 83 aa2.37□□□□□ -2.03
NIPBL-203ENST00000503274 C9orf153Q5TBE3 101 aa2.37□□□□□ -2.03
NIPBL-203ENST00000503274 ZNF73O43830 326 aaPredicted RBP2.36□□□□□ -2.03
NIPBL-203ENST00000503274 ASB16-AS1Q495Z4 193 aa2.36□□□□□ -2.03
NIPBL-203ENST00000503274 OR13C6PQ8NH95 151 aa2.36□□□□□ -2.03
NIPBL-203ENST00000503274 COPS9Q8WXC6 57 aa2.36□□□□□ -2.03
NIPBL-203ENST00000503274 YPEL4Q96NS1 127 aa2.36□□□□□ -2.03
NIPBL-203ENST00000503274 Q9BRP9 147 aa2.36□□□□□ -2.03
NIPBL-203ENST00000503274 LIMD2Q9BT23 127 aa2.36□□□□□ -2.03
NIPBL-203ENST00000503274 LAMTOR3Q9UHA4 124 aa2.36□□□□□ -2.03
NIPBL-203ENST00000503274 ERC2-IT1O76042 136 aa2.35□□□□□ -2.03
NIPBL-203ENST00000503274 TSPEAR-AS2P59090 65 aa2.35□□□□□ -2.03
NIPBL-203ENST00000503274 PMCHL2Q9BQD1 86 aa2.35□□□□□ -2.03
NIPBL-203ENST00000503274 SPANXCQ9NY87 97 aa2.35□□□□□ -2.03
NIPBL-203ENST00000503274 TIMM17BO60830 172 aa2.34□□□□□ -2.03
NIPBL-203ENST00000503274 NPC2P61916 151 aa2.34□□□□□ -2.03
NIPBL-203ENST00000503274 TAL2Q16559 108 aa2.34□□□□□ -2.03
NIPBL-203ENST00000503274 SPANXDQ9BXN6 97 aa2.34□□□□□ -2.03
NIPBL-203ENST00000503274 ZNF815PA8K554 130 aa2.33□□□□□ -2.04
NIPBL-203ENST00000503274 SYS1-DBNDD2H3BUS1 97 aa2.33□□□□□ -2.04
NIPBL-203ENST00000503274 COX7BP24311 80 aa2.33□□□□□ -2.04
NIPBL-203ENST00000503274 AKR1D1P51857 326 aa2.33□□□□□ -2.04
NIPBL-203ENST00000503274 LINC00308Q8TCZ7 52 aa2.33□□□□□ -2.04
NIPBL-203ENST00000503274 PRO1933Q9H354 126 aa2.33□□□□□ -2.04
NIPBL-203ENST00000503274 TRBV7-6A0A0J9YX20 115 aa2.32□□□□□ -2.04
NIPBL-203ENST00000503274 TEX49A0A1B0GTD5 131 aa2.32□□□□□ -2.04
NIPBL-203ENST00000503274 C20orf202A1L168 122 aa2.32□□□□□ -2.04
NIPBL-203ENST00000503274 H3BQ85 93 aa2.32□□□□□ -2.04
NIPBL-203ENST00000503274 H7C2G1 150 aa2.32□□□□□ -2.04
NIPBL-203ENST00000503274 IFITM1P13164 125 aa2.32□□□□□ -2.04
NIPBL-203ENST00000503274 SPRR1BP22528 89 aa2.32□□□□□ -2.04
NIPBL-203ENST00000503274 PSMB2P49721 201 aa2.32□□□□□ -2.04
NIPBL-203ENST00000503274 ELOF1P60002 83 aaKnown RBP2.32□□□□□ -2.04
NIPBL-203ENST00000503274 CD164Q04900 197 aa2.32□□□□□ -2.04
NIPBL-203ENST00000503274 LINC01545Q5VT33 79 aa2.32□□□□□ -2.04
NIPBL-203ENST00000503274 HRCT1Q6UXD1 115 aa2.32□□□□□ -2.04
NIPBL-203ENST00000503274 SOSTDC1Q6X4U4 206 aa2.32□□□□□ -2.04
NIPBL-203ENST00000503274 SCGB1D4Q6XE38 83 aa2.32□□□□□ -2.04
NIPBL-203ENST00000503274 DEFB105AQ8NG35 78 aa2.32□□□□□ -2.04
NIPBL-203ENST00000503274 NHP2Q9NX24 153 aaKnown RBP2.32□□□□□ -2.04
NIPBL-203ENST00000503274 NDUFS5O43920 106 aa2.31□□□□□ -2.04
NIPBL-203ENST00000503274 VAMP3Q15836 100 aa2.31□□□□□ -2.04
NIPBL-203ENST00000503274 FSIP2Q5CZC0 6907 aa2.3□□□□□ -2.04
NIPBL-203ENST00000503274 TRAV13-2A0A0B4J235 113 aa2.3□□□□□ -2.04
NIPBL-203ENST00000503274 F8WEM9 126 aa2.3□□□□□ -2.04
NIPBL-203ENST00000503274 HIST1H2BKO60814 126 aa2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms