RNA–Protein interactions for RNA: ENST00000503215.5

SCLT1-204, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,364 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-204ENST00000503215 B5MCH6 92 aa9.35□□□□□ -0.91
SCLT1-204ENST00000503215 HERV-K104P63124 156 aa9.35□□□□□ -0.91
SCLT1-204ENST00000503215 DAND5Q8N907 189 aa9.35□□□□□ -0.91
SCLT1-204ENST00000503215 PPDPFQ9H3Y8 114 aa9.35□□□□□ -0.91
SCLT1-204ENST00000503215 TRBV10-3A0A0K0K1G6 114 aa9.34□□□□□ -0.91
SCLT1-204ENST00000503215 KRTAP4-16G5E9R7 235 aaPredicted RBP9.34□□□□□ -0.91
SCLT1-204ENST00000503215 PRYO14603 147 aa9.34□□□□□ -0.91
SCLT1-204ENST00000503215 SPRR1AP35321 89 aa9.34□□□□□ -0.91
SCLT1-204ENST00000503215 MUSTN1Q8IVN3 82 aa9.34□□□□□ -0.91
SCLT1-204ENST00000503215 COPS9Q8WXC6 57 aa9.34□□□□□ -0.91
SCLT1-204ENST00000503215 KCNQ1DNQ9H478 68 aa9.34□□□□□ -0.91
SCLT1-204ENST00000503215 SS18L2Q9UHA2 77 aa9.34□□□□□ -0.91
SCLT1-204ENST00000503215 SMCR5Q8TEV8 140 aa9.33□□□□□ -0.92
SCLT1-204ENST00000503215 IGLV7-46A0A075B6I9 117 aa9.31□□□□□ -0.92
SCLT1-204ENST00000503215 LORP23490 312 aaPredicted RBP9.31□□□□□ -0.92
SCLT1-204ENST00000503215 Q1RN00 199 aa9.31□□□□□ -0.92
SCLT1-204ENST00000503215 LINC00337Q8N6G1 96 aa9.31□□□□□ -0.92
SCLT1-204ENST00000503215 LST1O00453 97 aa9.29□□□□□ -0.92
SCLT1-204ENST00000503215 ETDCA0A1B0GVM5 59 aa9.28□□□□□ -0.92
SCLT1-204ENST00000503215 TRIAP1O43715 76 aa9.28□□□□□ -0.92
SCLT1-204ENST00000503215 EIF4EBP3O60516 100 aaPredicted RBP9.28□□□□□ -0.92
SCLT1-204ENST00000503215 ERC2-IT1O76042 136 aa9.28□□□□□ -0.92
SCLT1-204ENST00000503215 LITAFQ99732 161 aa9.27□□□□□ -0.93
SCLT1-204ENST00000503215 TPRXLQ17RH7 258 aa9.26□□□□□ -0.93
SCLT1-204ENST00000503215 Q8NBF4 154 aa9.26□□□□□ -0.93
SCLT1-204ENST00000503215 ZNF706Q9Y5V0 76 aaPredicted RBP9.26□□□□□ -0.93
SCLT1-204ENST00000503215 TEX49A0A1B0GTD5 131 aa9.25□□□□□ -0.93
SCLT1-204ENST00000503215 CCDC179H3BU77 68 aa9.25□□□□□ -0.93
SCLT1-204ENST00000503215 GAGE2AQ6NT46 116 aa9.24□□□□□ -0.93
SCLT1-204ENST00000503215 SPAG11AQ6PDA7 123 aa9.24□□□□□ -0.93
SCLT1-204ENST00000503215 SOSTDC1Q6X4U4 206 aa9.24□□□□□ -0.93
SCLT1-204ENST00000503215 LINC00643Q86TS7 51 aa9.24□□□□□ -0.93
SCLT1-204ENST00000503215 Q9BRP9 147 aa9.24□□□□□ -0.93
SCLT1-204ENST00000503215 LINC00483Q53H64 154 aa9.24□□□□□ -0.93
SCLT1-204ENST00000503215 ADAMTSL4-AS1Q5T5F5 129 aa9.24□□□□□ -0.93
SCLT1-204ENST00000503215 NPC2P61916 151 aa9.23□□□□□ -0.93
SCLT1-204ENST00000503215 TRACP01848 142 aa9.22□□□□□ -0.93
SCLT1-204ENST00000503215 MUC17Q685J3 4493 aa9.21□□□□□ -0.94
SCLT1-204ENST00000503215 UQCRQO14949 82 aa9.21□□□□□ -0.94
SCLT1-204ENST00000503215 H7C2G1 150 aa9.2□□□□□ -0.94
SCLT1-204ENST00000503215 IGLV6-57P01721 117 aa9.2□□□□□ -0.94
SCLT1-204ENST00000503215 SMIM20Q8N5G0 67 aa9.2□□□□□ -0.94
SCLT1-204ENST00000503215 IGLV9-49A0A0B4J1Y8 123 aa9.19□□□□□ -0.94
SCLT1-204ENST00000503215 A0A1B0GX51 115 aa9.19□□□□□ -0.94
SCLT1-204ENST00000503215 MOBPQ13875 183 aa9.19□□□□□ -0.94
SCLT1-204ENST00000503215 Q6ZRX8 168 aa9.19□□□□□ -0.94
SCLT1-204ENST00000503215 FAT4Q6V0I7 4981 aa9.19□□□□□ -0.94
SCLT1-204ENST00000503215 NDUFC2O95298 119 aa9.18□□□□□ -0.94
SCLT1-204ENST00000503215 RPS28P62857 69 aaKnown RBP9.18□□□□□ -0.94
SCLT1-204ENST00000503215 A0A0U1RQV1 116 aa9.17□□□□□ -0.94
SCLT1-204ENST00000503215 S100A7L2Q5SY68 101 aa9.17□□□□□ -0.94
SCLT1-204ENST00000503215 TRAV23DV6A0A075B6W5 121 aa9.15□□□□□ -0.94
SCLT1-204ENST00000503215 SPINK1P00995 79 aa9.15□□□□□ -0.94
SCLT1-204ENST00000503215 KRTAP13-3Q3SY46 172 aa9.15□□□□□ -0.94
SCLT1-204ENST00000503215 FP248Q71RG6 208 aaPredicted RBP9.15□□□□□ -0.94
SCLT1-204ENST00000503215 ST20-AS1Q8NBB2 130 aa9.14□□□□□ -0.95
SCLT1-204ENST00000503215 ATOX1O00244 68 aa9.12□□□□□ -0.95
SCLT1-204ENST00000503215 ZNF73O43830 326 aaPredicted RBP9.12□□□□□ -0.95
SCLT1-204ENST00000503215 SSBP3-AS1Q7Z2R9 100 aa9.12□□□□□ -0.95
SCLT1-204ENST00000503215 C9orf153Q5TBE3 101 aa9.12□□□□□ -0.95
SCLT1-204ENST00000503215 Q8N377 158 aa9.12□□□□□ -0.95
SCLT1-204ENST00000503215 LINC00308Q8TCZ7 52 aa9.12□□□□□ -0.95
SCLT1-204ENST00000503215 CLEC2BQ92478 149 aa9.12□□□□□ -0.95
SCLT1-204ENST00000503215 FAM236AA0A1B0GUQ0 79 aa9.11□□□□□ -0.95
SCLT1-204ENST00000503215 FAM236BA0A1B0GV22 79 aa9.11□□□□□ -0.95
SCLT1-204ENST00000503215 COX7CP15954 63 aa9.11□□□□□ -0.95
SCLT1-204ENST00000503215 TRAV13-2A0A0B4J235 113 aa9.1□□□□□ -0.95
SCLT1-204ENST00000503215 J3KT08 172 aa9.1□□□□□ -0.95
SCLT1-204ENST00000503215 HIST1H4AP62805 103 aaKnown RBP9.1□□□□□ -0.95
SCLT1-204ENST00000503215 BAALC-AS2P0C853 105 aa9.08□□□□□ -0.96
SCLT1-204ENST00000503215 OR13C6PQ8NH95 151 aa9.08□□□□□ -0.96
SCLT1-204ENST00000503215 KRTAP4-1Q9BYQ7 146 aa9.08□□□□□ -0.96
SCLT1-204ENST00000503215 H0YGX0 51 aa9.06□□□□□ -0.96
SCLT1-204ENST00000503215 RPS29P62273 56 aaKnown RBP9.05□□□□□ -0.96
SCLT1-204ENST00000503215 C5orf47Q569G3 176 aa9.05□□□□□ -0.96
SCLT1-204ENST00000503215 ASB16-AS1Q495Z4 193 aa9.04□□□□□ -0.96
SCLT1-204ENST00000503215 Q6JHZ5 121 aa9.04□□□□□ -0.96
SCLT1-204ENST00000503215 KRTAP9-2Q9BYQ4 174 aa9.04□□□□□ -0.96
SCLT1-204ENST00000503215 TMEM258P61165 79 aa9.03□□□□□ -0.96
SCLT1-204ENST00000503215 OBSCN-AS1Q96MR7 158 aa9.03□□□□□ -0.96
SCLT1-204ENST00000503215 SPRR1BP22528 89 aa9□□□□□ -0.97
SCLT1-204ENST00000503215 ATP5EP2Q5VTU8 51 aa9□□□□□ -0.97
SCLT1-204ENST00000503215 C6orf99Q4VX62 202 aa8.99□□□□□ -0.97
SCLT1-204ENST00000503215 HRCT1Q6UXD1 115 aa8.99□□□□□ -0.97
SCLT1-204ENST00000503215 SERP2Q8N6R1 65 aa8.99□□□□□ -0.97
SCLT1-204ENST00000503215 DNAL4O96015 105 aa8.99□□□□□ -0.97
SCLT1-204ENST00000503215 DHRS4-AS1Q9P1J3 65 aa8.99□□□□□ -0.97
SCLT1-204ENST00000503215 COX7BP24311 80 aa8.98□□□□□ -0.97
SCLT1-204ENST00000503215 ELOF1P60002 83 aaKnown RBP8.98□□□□□ -0.97
SCLT1-204ENST00000503215 DEFB105AQ8NG35 78 aa8.97□□□□□ -0.97
SCLT1-204ENST00000503215 SEC61BP60468 96 aaKnown RBP8.96□□□□□ -0.98
SCLT1-204ENST00000503215 XP32Q5T750 250 aa8.96□□□□□ -0.98
SCLT1-204ENST00000503215 LAMTOR3Q9UHA4 124 aa8.94□□□□□ -0.98
SCLT1-204ENST00000503215 JMJD7-PLA2G4BH0Y9G9 81 aa8.93□□□□□ -0.98
SCLT1-204ENST00000503215 A0A0G2JQZ4 141 aa8.92□□□□□ -0.98
SCLT1-204ENST00000503215 SMIM29Q86T20 159 aa8.91□□□□□ -0.98
SCLT1-204ENST00000503215 FAM218AQ96MZ4 157 aa8.91□□□□□ -0.98
SCLT1-204ENST00000503215 hADV29S1A0JD25 119 aa8.9□□□□□ -0.98
SCLT1-204ENST00000503215 LINC01547P58512 204 aaPredicted RBP8.9□□□□□ -0.98
SCLT1-204ENST00000503215 TRBV7-6A0A0J9YX20 115 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 92.1 ms