RNA–Protein interactions for RNA: ENST00000498463.5

SNX13-212, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 687 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-212ENST00000498463 DEFB119Q8N690 84 aa3.6□□□□□ -1.83
SNX13-212ENST00000498463 NOP10Q9NPE3 64 aaKnown RBP3.6□□□□□ -1.83
SNX13-212ENST00000498463 PRO0255Q9UI72 69 aa3.6□□□□□ -1.83
SNX13-212ENST00000498463 PP632Q6XCG6 107 aa3.59□□□□□ -1.83
SNX13-212ENST00000498463 SSBP3-AS1Q7Z2R9 100 aa3.59□□□□□ -1.83
SNX13-212ENST00000498463 TRIOO75962 3097 aa3.59□□□□□ -1.84
SNX13-212ENST00000498463 TECTAO75443 2155 aa3.58□□□□□ -1.84
SNX13-212ENST00000498463 WDR87Q6ZQQ6 2873 aa3.58□□□□□ -1.84
SNX13-212ENST00000498463 VCANP13611 3396 aa3.57□□□□□ -1.84
SNX13-212ENST00000498463 COX6B2Q6YFQ2 88 aa3.57□□□□□ -1.84
SNX13-212ENST00000498463 MUC3AQ02505 3323 aa3.57□□□□□ -1.84
SNX13-212ENST00000498463 TTC28Q96AY4 2481 aa3.56□□□□□ -1.84
SNX13-212ENST00000498463 SPRR1BP22528 89 aa3.56□□□□□ -1.84
SNX13-212ENST00000498463 KRTAP12-1P59990 96 aa3.56□□□□□ -1.84
SNX13-212ENST00000498463 LELP1Q5T871 98 aa3.55□□□□□ -1.84
SNX13-212ENST00000498463 Q96NJ1 140 aa3.55□□□□□ -1.84
SNX13-212ENST00000498463 AHCTF1Q8WYP5 2266 aa3.55□□□□□ -1.84
SNX13-212ENST00000498463 SPEGQ15772 3267 aa3.55□□□□□ -1.84
SNX13-212ENST00000498463 COL6A3P12111 3177 aa3.55□□□□□ -1.84
SNX13-212ENST00000498463 SPTBN1Q01082 2364 aaKnown RBP3.53□□□□□ -1.84
SNX13-212ENST00000498463 WDFY3Q8IZQ1 3526 aa3.53□□□□□ -1.84
SNX13-212ENST00000498463 LAMA1P25391 3075 aa3.52□□□□□ -1.85
SNX13-212ENST00000498463 NBDYA0A0U1RRE5 68 aa3.52□□□□□ -1.85
SNX13-212ENST00000498463 CRIPTQ9P021 101 aa3.52□□□□□ -1.85
SNX13-212ENST00000498463 LYNX1P0DP58 116 aa3.51□□□□□ -1.85
SNX13-212ENST00000498463 LCE3AQ5TA76 89 aa3.51□□□□□ -1.85
SNX13-212ENST00000498463 PIEZO1Q92508 2521 aa3.5□□□□□ -1.85
SNX13-212ENST00000498463 VPS13AQ96RL7 3174 aa3.49□□□□□ -1.85
SNX13-212ENST00000498463 NCOR1O75376 2440 aa3.49□□□□□ -1.85
SNX13-212ENST00000498463 BDP1A6H8Y1 2624 aa3.48□□□□□ -1.85
SNX13-212ENST00000498463 SPENQ96T58 3664 aaKnown RBP3.47□□□□□ -1.85
SNX13-212ENST00000498463 WNK1Q9H4A3 2382 aa3.47□□□□□ -1.85
SNX13-212ENST00000498463 WDFY4Q6ZS81 3184 aa3.47□□□□□ -1.85
SNX13-212ENST00000498463 FRYLO94915 3013 aa3.46□□□□□ -1.86
SNX13-212ENST00000498463 CACNA1BQ00975 2339 aa3.46□□□□□ -1.86
SNX13-212ENST00000498463 CFAP54Q96N23 3096 aa3.45□□□□□ -1.86
SNX13-212ENST00000498463 H1FX-AS1Q4G0G2 97 aa3.44□□□□□ -1.86
SNX13-212ENST00000498463 KRTAP13-1Q8IUC0 172 aa3.44□□□□□ -1.86
SNX13-212ENST00000498463 H0YAA0 97 aa3.43□□□□□ -1.86
SNX13-212ENST00000498463 DEFB130BP0DP73 79 aa3.43□□□□□ -1.86
SNX13-212ENST00000498463 DEFB130AP0DP74 79 aa3.43□□□□□ -1.86
SNX13-212ENST00000498463 Q6ZSA8 131 aa3.43□□□□□ -1.86
SNX13-212ENST00000498463 FAM186AA6NE01 2351 aa3.43□□□□□ -1.86
SNX13-212ENST00000498463 MUC6Q6W4X9 2439 aa3.42□□□□□ -1.86
SNX13-212ENST00000498463 H3BNG1 76 aa3.42□□□□□ -1.86
SNX13-212ENST00000498463 ZFHX4Q86UP3 3567 aa3.41□□□□□ -1.86
SNX13-212ENST00000498463 CACNA1EQ15878 2313 aa3.41□□□□□ -1.86
SNX13-212ENST00000498463 FREM2Q5SZK8 3169 aa3.41□□□□□ -1.86
SNX13-212ENST00000498463 ALMS1Q8TCU4 4167 aa3.4□□□□□ -1.86
SNX13-212ENST00000498463 BSNQ9UPA5 3926 aa3.4□□□□□ -1.86
SNX13-212ENST00000498463 RPL37P61927 97 aaKnown RBP3.4□□□□□ -1.87
SNX13-212ENST00000498463 DEFB136Q30KP8 78 aa3.4□□□□□ -1.87
SNX13-212ENST00000498463 ASPMQ8IZT6 3477 aa3.4□□□□□ -1.87
SNX13-212ENST00000498463 HIVEP2P31629 2446 aa3.39□□□□□ -1.87
SNX13-212ENST00000498463 INE1O15225 51 aa3.39□□□□□ -1.87
SNX13-212ENST00000498463 PLAC4Q8WY50 150 aa3.39□□□□□ -1.87
SNX13-212ENST00000498463 CEP250Q9BV73 2442 aa3.38□□□□□ -1.87
SNX13-212ENST00000498463 SPTBN2O15020 2390 aa3.37□□□□□ -1.87
SNX13-212ENST00000498463 CACNA1HO95180 2353 aa3.37□□□□□ -1.87
SNX13-212ENST00000498463 CELSR3Q9NYQ7 3312 aa3.36□□□□□ -1.87
SNX13-212ENST00000498463 CNOT1A5YKK6 2376 aaKnown RBP3.36□□□□□ -1.87
SNX13-212ENST00000498463 ZDBF2Q9HCK1 2354 aa3.36□□□□□ -1.87
SNX13-212ENST00000498463 SPART-AS1P0CW21 52 aa3.36□□□□□ -1.87
SNX13-212ENST00000498463 A0A096LPF7 62 aa3.35□□□□□ -1.87
SNX13-212ENST00000498463 PKDREJQ9NTG1 2253 aa3.35□□□□□ -1.87
SNX13-212ENST00000498463 DMXL1Q9Y485 3027 aa3.34□□□□□ -1.87
SNX13-212ENST00000498463 LAMA5O15230 3695 aa3.34□□□□□ -1.87
SNX13-212ENST00000498463 KRTAP12-3P60328 96 aa3.34□□□□□ -1.87
SNX13-212ENST00000498463 LINC01556Q5JQF7 62 aa3.34□□□□□ -1.87
SNX13-212ENST00000498463 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.34□□□□□ -1.87
SNX13-212ENST00000498463 MAP1BP46821 2468 aaKnown RBP3.34□□□□□ -1.88
SNX13-212ENST00000498463 ANKRD17O75179 2603 aaKnown RBP3.34□□□□□ -1.88
SNX13-212ENST00000498463 MGAQ8IWI9 3026 aa3.33□□□□□ -1.88
SNX13-212ENST00000498463 TPRP12270 2363 aaKnown RBP3.33□□□□□ -1.88
SNX13-212ENST00000498463 PTPRZ1P23471 2315 aaPredicted RBP3.33□□□□□ -1.88
SNX13-212ENST00000498463 PRLHP81277 87 aa3.32□□□□□ -1.88
SNX13-212ENST00000498463 APC2O95996 2303 aa3.32□□□□□ -1.88
SNX13-212ENST00000498463 GVINP1Q7Z2Y8 2422 aa3.32□□□□□ -1.88
SNX13-212ENST00000498463 RIF1Q5UIP0 2472 aaKnown RBP3.32□□□□□ -1.88
SNX13-212ENST00000498463 CFAP47Q6ZTR5 3102 aa3.31□□□□□ -1.88
SNX13-212ENST00000498463 LOC400499M0QZD8 3231 aa3.31□□□□□ -1.88
SNX13-212ENST00000498463 CHD8Q9HCK8 2581 aa3.31□□□□□ -1.88
SNX13-212ENST00000498463 DCHS1Q96JQ0 3298 aa3.3□□□□□ -1.88
SNX13-212ENST00000498463 COL6A6A6NMZ7 2263 aa3.3□□□□□ -1.88
SNX13-212ENST00000498463 FRYQ5TBA9 3013 aa3.3□□□□□ -1.88
SNX13-212ENST00000498463 OTOGLQ3ZCN5 2332 aa3.29□□□□□ -1.88
SNX13-212ENST00000498463 J3QKU1 62 aa3.29□□□□□ -1.88
SNX13-212ENST00000498463 SETXQ7Z333 2677 aaKnown RBP3.29□□□□□ -1.88
SNX13-212ENST00000498463 SPTBN4Q9H254 2564 aa3.28□□□□□ -1.88
SNX13-212ENST00000498463 K7EIL1 84 aa3.28□□□□□ -1.88
SNX13-212ENST00000498463 EPG5Q9HCE0 2579 aa3.28□□□□□ -1.88
SNX13-212ENST00000498463 NCOR2Q9Y618 2525 aa3.28□□□□□ -1.88
SNX13-212ENST00000498463 ZNF292O60281 2723 aa3.28□□□□□ -1.89
SNX13-212ENST00000498463 ACACAQ13085 2346 aa3.27□□□□□ -1.89
SNX13-212ENST00000498463 EP300Q09472 2414 aaPredicted RBP3.27□□□□□ -1.89
SNX13-212ENST00000498463 C10orf99Q6UWK7 81 aa3.27□□□□□ -1.89
SNX13-212ENST00000498463 AKAP13Q12802 2813 aa3.27□□□□□ -1.89
SNX13-212ENST00000498463 ACACBO00763 2458 aa3.26□□□□□ -1.89
SNX13-212ENST00000498463 SPINK1P00995 79 aa3.26□□□□□ -1.89
SNX13-212ENST00000498463 ZZEF1O43149 2961 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms