RNA–Protein interactions for RNA: ENST00000498271.1

C4A-259, Transcript of complement C4A (Rodgers blood group), humanhuman

TSL 1 (best) BASIC

Gene C4A, Length 5,269 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4A-259ENST00000498271 CR1P17927 2039 aa9.58□□□□□ -0.88
C4A-259ENST00000498271 PRR26Q8N8Z3 221 aa9.57□□□□□ -0.88
C4A-259ENST00000498271 HELZ2Q9BYK8 2649 aaKnown RBP9.57□□□□□ -0.88
C4A-259ENST00000498271 CASC10Q5T4H9 136 aa9.56□□□□□ -0.88
C4A-259ENST00000498271 Q5VV11 94 aa9.56□□□□□ -0.88
C4A-259ENST00000498271 OXTP01178 125 aa9.53□□□□□ -0.88
C4A-259ENST00000498271 MAST4O15021 2626 aa9.5□□□□□ -0.89
C4A-259ENST00000498271 H3BS24 57 aa9.49□□□□□ -0.89
C4A-259ENST00000498271 MAP1AP78559 2803 aaPredicted RBP9.49□□□□□ -0.89
C4A-259ENST00000498271 IGLV7-43P04211 117 aa9.47□□□□□ -0.89
C4A-259ENST00000498271 SPTBN5Q9NRC6 3674 aaKnown RBP9.46□□□□□ -0.89
C4A-259ENST00000498271 NBEAQ8NFP9 2946 aa9.46□□□□□ -0.9
C4A-259ENST00000498271 MMP24-AS1A0A0U1RRL7 71 aa9.45□□□□□ -0.9
C4A-259ENST00000498271 PSORS1C2Q9UIG4 136 aa9.45□□□□□ -0.9
C4A-259ENST00000498271 HRES1P13985 223 aa9.44□□□□□ -0.9
C4A-259ENST00000498271 SMR3BP02814 79 aaPredicted RBP9.43□□□□□ -0.9
C4A-259ENST00000498271 FRYLO94915 3013 aa9.43□□□□□ -0.9
C4A-259ENST00000498271 A0A1B0GU33 70 aa9.42□□□□□ -0.9
C4A-259ENST00000498271 BOD1L1Q8NFC6 3051 aa9.41□□□□□ -0.9
C4A-259ENST00000498271 SPRR1AP35321 89 aa9.41□□□□□ -0.9
C4A-259ENST00000498271 ASB16-AS1Q495Z4 193 aa9.41□□□□□ -0.9
C4A-259ENST00000498271 LUZP6Q538Z0 58 aa9.41□□□□□ -0.9
C4A-259ENST00000498271 IGSF10Q6WRI0 2623 aa9.4□□□□□ -0.9
C4A-259ENST00000498271 Q8N1X5 172 aa9.4□□□□□ -0.9
C4A-259ENST00000498271 CHD6Q8TD26 2715 aa9.4□□□□□ -0.9
C4A-259ENST00000498271 Q8NDZ9 215 aa9.4□□□□□ -0.9
C4A-259ENST00000498271 SPEGQ15772 3267 aa9.4□□□□□ -0.9
C4A-259ENST00000498271 COL6A3P12111 3177 aa9.4□□□□□ -0.91
C4A-259ENST00000498271 PRAC1Q96KF2 57 aa9.39□□□□□ -0.91
C4A-259ENST00000498271 KRTAP21-3Q3LHN1 58 aa9.38□□□□□ -0.91
C4A-259ENST00000498271 ANAPC11Q9NYG5 84 aa9.38□□□□□ -0.91
C4A-259ENST00000498271 ADGRG4Q8IZF6 3080 aa9.37□□□□□ -0.91
C4A-259ENST00000498271 REV3LO60673 3130 aa9.36□□□□□ -0.91
C4A-259ENST00000498271 DMAC1Q96GE9 116 aa9.35□□□□□ -0.91
C4A-259ENST00000498271 SPINK7P58062 85 aa9.35□□□□□ -0.91
C4A-259ENST00000498271 LCE6AA0A183 80 aa9.34□□□□□ -0.91
C4A-259ENST00000498271 A0A0D9SG42 100 aa9.34□□□□□ -0.91
C4A-259ENST00000498271 EYSQ5T1H1 3165 aa9.34□□□□□ -0.91
C4A-259ENST00000498271 SPRR1BP22528 89 aa9.33□□□□□ -0.92
C4A-259ENST00000498271 ATMQ13315 3056 aa9.33□□□□□ -0.92
C4A-259ENST00000498271 LINC00472Q9H8W2 130 aa9.33□□□□□ -0.92
C4A-259ENST00000498271 C9orf92A6NGG3 77 aa9.32□□□□□ -0.92
C4A-259ENST00000498271 KALRNO60229 2985 aa9.32□□□□□ -0.92
C4A-259ENST00000498271 GCN1Q92616 2671 aaKnown RBP9.32□□□□□ -0.92
C4A-259ENST00000498271 FREM2Q5SZK8 3169 aa9.32□□□□□ -0.92
C4A-259ENST00000498271 CSAG1Q6PB30 78 aa9.31□□□□□ -0.92
C4A-259ENST00000498271 TEX15Q9BXT5 2789 aa9.29□□□□□ -0.92
C4A-259ENST00000498271 STAB1Q9NY15 2570 aa9.27□□□□□ -0.93
C4A-259ENST00000498271 DMXL2Q8TDJ6 3036 aa9.26□□□□□ -0.93
C4A-259ENST00000498271 UNC79Q9P2D8 2635 aa9.26□□□□□ -0.93
C4A-259ENST00000498271 LRBAP50851 2863 aa9.25□□□□□ -0.93
C4A-259ENST00000498271 TNP2Q05952 138 aa9.25□□□□□ -0.93
C4A-259ENST00000498271 Q6ZSA8 131 aa9.25□□□□□ -0.93
C4A-259ENST00000498271 TNRC18O15417 2968 aaPredicted RBP9.25□□□□□ -0.93
C4A-259ENST00000498271 SETXQ7Z333 2677 aaKnown RBP9.23□□□□□ -0.93
C4A-259ENST00000498271 ZCCHC13Q8WW36 166 aaKnown RBP9.22□□□□□ -0.93
C4A-259ENST00000498271 Q5W150 140 aa9.21□□□□□ -0.93
C4A-259ENST00000498271 FLNCQ14315 2725 aa9.21□□□□□ -0.94
C4A-259ENST00000498271 KRTAP26-1Q6PEX3 210 aa9.21□□□□□ -0.94
C4A-259ENST00000498271 COL12A1Q99715 3063 aa9.21□□□□□ -0.94
C4A-259ENST00000498271 NBEAL2Q6ZNJ1 2754 aa9.2□□□□□ -0.94
C4A-259ENST00000498271 USP34Q70CQ2 3546 aa9.2□□□□□ -0.94
C4A-259ENST00000498271 TEP1Q99973 2627 aaKnown RBP9.19□□□□□ -0.94
C4A-259ENST00000498271 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.19□□□□□ -0.94
C4A-259ENST00000498271 M0R2T5 61 aa9.19□□□□□ -0.94
C4A-259ENST00000498271 A0A0A0MQY5 61 aa9.18□□□□□ -0.94
C4A-259ENST00000498271 Q6ZR54 194 aa9.17□□□□□ -0.94
C4A-259ENST00000498271 SEC61BP60468 96 aaKnown RBP9.16□□□□□ -0.94
C4A-259ENST00000498271 MYO15AQ9UKN7 3530 aa9.15□□□□□ -0.94
C4A-259ENST00000498271 KRTAP29-1A8MX34 341 aaPredicted RBP9.13□□□□□ -0.95
C4A-259ENST00000498271 BAHCC1Q9P281 2608 aa9.12□□□□□ -0.95
C4A-259ENST00000498271 LINC00483Q53H64 154 aa9.12□□□□□ -0.95
C4A-259ENST00000498271 ITPR1Q14643 2758 aa9.11□□□□□ -0.95
C4A-259ENST00000498271 KRTAP1-5Q9BYS1 174 aa9.11□□□□□ -0.95
C4A-259ENST00000498271 UBR5O95071 2799 aaPredicted RBP9.1□□□□□ -0.95
C4A-259ENST00000498271 COL6A5A8TX70 2615 aa9.1□□□□□ -0.95
C4A-259ENST00000498271 NOTCH1P46531 2555 aa9.1□□□□□ -0.95
C4A-259ENST00000498271 A6NN06 94 aa9.09□□□□□ -0.95
C4A-259ENST00000498271 ROMO1P60602 79 aa9.09□□□□□ -0.95
C4A-259ENST00000498271 PLAC8Q9NZF1 115 aa9.09□□□□□ -0.95
C4A-259ENST00000498271 DMXL1Q9Y485 3027 aa9.09□□□□□ -0.95
C4A-259ENST00000498271 TACC2O95359 2948 aa9.08□□□□□ -0.96
C4A-259ENST00000498271 LOC400499M0QZD8 3231 aa9.07□□□□□ -0.96
C4A-259ENST00000498271 SPATA8Q6RVD6 105 aa9.07□□□□□ -0.96
C4A-259ENST00000498271 RPL37P61927 97 aaKnown RBP9.05□□□□□ -0.96
C4A-259ENST00000498271 Q5VSD8 79 aa9.04□□□□□ -0.96
C4A-259ENST00000498271 KRTAP4-16G5E9R7 235 aaPredicted RBP9.03□□□□□ -0.96
C4A-259ENST00000498271 ZZEF1O43149 2961 aa9.02□□□□□ -0.97
C4A-259ENST00000498271 CFAP47Q6ZTR5 3102 aa9.01□□□□□ -0.97
C4A-259ENST00000498271 UTP20O75691 2785 aaKnown RBP9.01□□□□□ -0.97
C4A-259ENST00000498271 H1FX-AS1Q4G0G2 97 aa9.01□□□□□ -0.97
C4A-259ENST00000498271 CAMK2N1Q7Z7J9 78 aa8.99□□□□□ -0.97
C4A-259ENST00000498271 S4R3F8 94 aa8.98□□□□□ -0.97
C4A-259ENST00000498271 A0A087X002 238 aa8.96□□□□□ -0.98
C4A-259ENST00000498271 HRNRQ86YZ3 2850 aaPredicted RBP8.93□□□□□ -0.98
C4A-259ENST00000498271 ITPR2Q14571 2701 aa8.91□□□□□ -0.98
C4A-259ENST00000498271 NBEAL1Q6ZS30 2694 aa8.91□□□□□ -0.98
C4A-259ENST00000498271 KRTAP25-1Q3LHN0 102 aa8.88□□□□□ -0.99
C4A-259ENST00000498271 ZANQ9Y493 2812 aa8.87□□□□□ -0.99
C4A-259ENST00000498271 KRTAP16-1A8MUX0 517 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms