RNA–Protein interactions for RNA: ENST00000497597.5

TRAPPC12-223, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 3,401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-223ENST00000497597 TENM1Q9UKZ4 2725 aa6.84□□□□□ -1.31
TRAPPC12-223ENST00000497597 TENM4Q6N022 2769 aa6.83□□□□□ -1.32
TRAPPC12-223ENST00000497597 ZCCHC13Q8WW36 166 aaKnown RBP6.83□□□□□ -1.32
TRAPPC12-223ENST00000497597 KCNQ1DNQ9H478 68 aa6.83□□□□□ -1.32
TRAPPC12-223ENST00000497597 LINC00588Q9Y4M8 146 aa6.83□□□□□ -1.32
TRAPPC12-223ENST00000497597 Q8NAQ8 132 aa6.82□□□□□ -1.32
TRAPPC12-223ENST00000497597 C11orf45Q8TAV5 145 aa6.82□□□□□ -1.32
TRAPPC12-223ENST00000497597 CYP4F30PQ9H0H9 118 aa6.82□□□□□ -1.32
TRAPPC12-223ENST00000497597 IGFL1Q6UW32 110 aa6.82□□□□□ -1.32
TRAPPC12-223ENST00000497597 LCA10Q71F78 164 aa6.82□□□□□ -1.32
TRAPPC12-223ENST00000497597 COL7A1Q02388 2944 aa6.81□□□□□ -1.32
TRAPPC12-223ENST00000497597 CASC10Q5T4H9 136 aa6.8□□□□□ -1.32
TRAPPC12-223ENST00000497597 NSD1Q96L73 2696 aaPredicted RBP6.8□□□□□ -1.32
TRAPPC12-223ENST00000497597 PRAC1Q96KF2 57 aa6.79□□□□□ -1.32
TRAPPC12-223ENST00000497597 TENM3Q9P273 2699 aa6.79□□□□□ -1.32
TRAPPC12-223ENST00000497597 REG3GQ6UW15 175 aa6.79□□□□□ -1.32
TRAPPC12-223ENST00000497597 MGAM2Q2M2H8 2515 aa6.78□□□□□ -1.32
TRAPPC12-223ENST00000497597 J3QKU1 62 aa6.78□□□□□ -1.32
TRAPPC12-223ENST00000497597 KRTAP10-3P60369 221 aa6.78□□□□□ -1.32
TRAPPC12-223ENST00000497597 DEFB131BA0A096LNP1 70 aa6.78□□□□□ -1.32
TRAPPC12-223ENST00000497597 ATP11AUNQ6ZP68 121 aa6.78□□□□□ -1.32
TRAPPC12-223ENST00000497597 IGLV1-50A0A075B6I6 118 aa6.77□□□□□ -1.33
TRAPPC12-223ENST00000497597 LOC101927531A0A1B0GV80 90 aa6.76□□□□□ -1.33
TRAPPC12-223ENST00000497597 STAB1Q9NY15 2570 aa6.75□□□□□ -1.33
TRAPPC12-223ENST00000497597 OXLD1Q5BKU9 147 aa6.75□□□□□ -1.33
TRAPPC12-223ENST00000497597 SPRR4Q96PI1 79 aa6.75□□□□□ -1.33
TRAPPC12-223ENST00000497597 IGLV9-49A0A0B4J1Y8 123 aa6.74□□□□□ -1.33
TRAPPC12-223ENST00000497597 LCE6AA0A183 80 aa6.74□□□□□ -1.33
TRAPPC12-223ENST00000497597 SPINK7P58062 85 aa6.74□□□□□ -1.33
TRAPPC12-223ENST00000497597 CDK2AP2O75956 126 aa6.73□□□□□ -1.33
TRAPPC12-223ENST00000497597 TNP2Q05952 138 aa6.73□□□□□ -1.33
TRAPPC12-223ENST00000497597 IGHV6-1A0A0B4J1U7 121 aa6.72□□□□□ -1.33
TRAPPC12-223ENST00000497597 C7orf65Q6ZTY9 151 aa6.72□□□□□ -1.33
TRAPPC12-223ENST00000497597 MOBPQ13875 183 aa6.71□□□□□ -1.33
TRAPPC12-223ENST00000497597 A0A1B0GW54 56 aa6.71□□□□□ -1.34
TRAPPC12-223ENST00000497597 CNBPP62633 177 aaKnown RBP6.71□□□□□ -1.34
TRAPPC12-223ENST00000497597 KRTAP26-1Q6PEX3 210 aa6.71□□□□□ -1.34
TRAPPC12-223ENST00000497597 SPINK6Q6UWN8 80 aa6.71□□□□□ -1.34
TRAPPC12-223ENST00000497597 PRR26Q8N8Z3 221 aa6.71□□□□□ -1.34
TRAPPC12-223ENST00000497597 CDC42SE1Q9NRR8 79 aa6.7□□□□□ -1.34
TRAPPC12-223ENST00000497597 CHTF8P0CG12 524 aa6.7□□□□□ -1.34
TRAPPC12-223ENST00000497597 ADM2Q7Z4H4 148 aa6.69□□□□□ -1.34
TRAPPC12-223ENST00000497597 Q75L30 129 aa6.69□□□□□ -1.34
TRAPPC12-223ENST00000497597 KRTAP1-3Q8IUG1 177 aa6.69□□□□□ -1.34
TRAPPC12-223ENST00000497597 MDFIQ99750 246 aa6.68□□□□□ -1.34
TRAPPC12-223ENST00000497597 RETNLBQ9BQ08 111 aa6.68□□□□□ -1.34
TRAPPC12-223ENST00000497597 A8MWP4 228 aa6.67□□□□□ -1.34
TRAPPC12-223ENST00000497597 SPANXA2-OT1Q8N9U9 137 aa6.67□□□□□ -1.34
TRAPPC12-223ENST00000497597 PHF5AQ7RTV0 110 aaKnown RBP6.67□□□□□ -1.34
TRAPPC12-223ENST00000497597 C4orf48Q5BLP8 95 aa6.67□□□□□ -1.34
TRAPPC12-223ENST00000497597 LINC01556Q5JQF7 62 aa6.67□□□□□ -1.34
TRAPPC12-223ENST00000497597 A6NN06 94 aa6.66□□□□□ -1.34
TRAPPC12-223ENST00000497597 INAFM1C9JVW0 142 aa6.66□□□□□ -1.34
TRAPPC12-223ENST00000497597 KRTAP4-16G5E9R7 235 aaPredicted RBP6.65□□□□□ -1.34
TRAPPC12-223ENST00000497597 KRTAP7-1Q8IUC3 87 aa6.64□□□□□ -1.35
TRAPPC12-223ENST00000497597 LINC00313P59037 77 aa6.64□□□□□ -1.35
TRAPPC12-223ENST00000497597 KRTAP29-1A8MX34 341 aaPredicted RBP6.63□□□□□ -1.35
TRAPPC12-223ENST00000497597 H3BPC8 53 aa6.63□□□□□ -1.35
TRAPPC12-223ENST00000497597 SPRR1AP35321 89 aa6.63□□□□□ -1.35
TRAPPC12-223ENST00000497597 ANK3Q12955 4377 aaKnown RBP6.62□□□□□ -1.35
TRAPPC12-223ENST00000497597 C8orf87E5RJ46 101 aa6.62□□□□□ -1.35
TRAPPC12-223ENST00000497597 IGLV8-61A0A075B6I0 122 aa6.62□□□□□ -1.35
TRAPPC12-223ENST00000497597 IGLV7-46A0A075B6I9 117 aa6.62□□□□□ -1.35
TRAPPC12-223ENST00000497597 C9orf163Q8N9P6 203 aa6.61□□□□□ -1.35
TRAPPC12-223ENST00000497597 H3BS24 57 aa6.6□□□□□ -1.35
TRAPPC12-223ENST00000497597 HRES1P13985 223 aa6.6□□□□□ -1.35
TRAPPC12-223ENST00000497597 UBE2DNLQ8IWF7 75 aa6.6□□□□□ -1.35
TRAPPC12-223ENST00000497597 KRTAP1-1Q07627 177 aa6.59□□□□□ -1.35
TRAPPC12-223ENST00000497597 MMP24-AS1A0A0U1RRL7 71 aa6.59□□□□□ -1.35
TRAPPC12-223ENST00000497597 K7EIL1 84 aa6.59□□□□□ -1.35
TRAPPC12-223ENST00000497597 TENM2Q9NT68 2774 aa6.58□□□□□ -1.36
TRAPPC12-223ENST00000497597 LINC01558Q9Y6Z2 57 aa6.58□□□□□ -1.36
TRAPPC12-223ENST00000497597 ANAPC11Q9NYG5 84 aa6.57□□□□□ -1.36
TRAPPC12-223ENST00000497597 STAB2Q8WWQ8 2551 aa6.57□□□□□ -1.36
TRAPPC12-223ENST00000497597 FLG2Q5D862 2391 aaPredicted RBP6.57□□□□□ -1.36
TRAPPC12-223ENST00000497597 TLX1NBP0CAT3 122 aa6.56□□□□□ -1.36
TRAPPC12-223ENST00000497597 LINC00472Q9H8W2 130 aa6.56□□□□□ -1.36
TRAPPC12-223ENST00000497597 C8orf17Q9NRJ1 99 aa6.55□□□□□ -1.36
TRAPPC12-223ENST00000497597 PLA2G2DQ9UNK4 145 aa6.55□□□□□ -1.36
TRAPPC12-223ENST00000497597 DNAH10OSP0CZ25 163 aa6.54□□□□□ -1.36
TRAPPC12-223ENST00000497597 A0A1B0GU69 56 aa6.53□□□□□ -1.36
TRAPPC12-223ENST00000497597 KRTAP11-1Q8IUC1 163 aa6.53□□□□□ -1.36
TRAPPC12-223ENST00000497597 IGLV5-37A0A075B6J1 123 aa6.53□□□□□ -1.36
TRAPPC12-223ENST00000497597 H3BNG1 76 aa6.51□□□□□ -1.37
TRAPPC12-223ENST00000497597 SPINK1P00995 79 aa6.51□□□□□ -1.37
TRAPPC12-223ENST00000497597 TP53AIP1Q9HCN2 124 aa6.51□□□□□ -1.37
TRAPPC12-223ENST00000497597 DNAH10Q8IVF4 4471 aa6.51□□□□□ -1.37
TRAPPC12-223ENST00000497597 LINC01554Q52M75 96 aa6.51□□□□□ -1.37
TRAPPC12-223ENST00000497597 A0A087X002 238 aa6.5□□□□□ -1.37
TRAPPC12-223ENST00000497597 KRTAP10-11P60412 298 aa6.5□□□□□ -1.37
TRAPPC12-223ENST00000497597 NOTCH2NLQ7Z3S9 236 aa6.5□□□□□ -1.37
TRAPPC12-223ENST00000497597 MRPL34Q9BQ48 92 aaKnown RBP6.5□□□□□ -1.37
TRAPPC12-223ENST00000497597 DMBT1Q9UGM3 2413 aaPredicted RBP6.49□□□□□ -1.37
TRAPPC12-223ENST00000497597 LYSTQ99698 3801 aa6.47□□□□□ -1.37
TRAPPC12-223ENST00000497597 CIRBP-AS1Q8TBR5 109 aa6.47□□□□□ -1.37
TRAPPC12-223ENST00000497597 ANK2Q01484 3957 aa6.47□□□□□ -1.37
TRAPPC12-223ENST00000497597 A0A1B0GVX0 72 aa6.46□□□□□ -1.37
TRAPPC12-223ENST00000497597 ACYP2P14621 99 aa6.46□□□□□ -1.37
TRAPPC12-223ENST00000497597 CSAG1Q6PB30 78 aa6.46□□□□□ -1.38
TRAPPC12-223ENST00000497597 MIR22HGQ0VDD5 57 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms