RNA–Protein interactions for RNA: ENST00000497044.5

SHTN1-206, Transcript of shootin 1, humanhuman

TSL 2

Gene SHTN1, Length 3,647 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHTN1-206ENST00000497044 C9orf116Q5BN46 136 aaPredicted RBP1.87□□□□□ -2.11
SHTN1-206ENST00000497044 TRACP01848 142 aa1.86□□□□□ -2.11
SHTN1-206ENST00000497044 ACYP1P07311 99 aa1.86□□□□□ -2.11
SHTN1-206ENST00000497044 RNASE13Q5GAN3 156 aaKnown RBP1.86□□□□□ -2.11
SHTN1-206ENST00000497044 COPS9Q8WXC6 57 aa1.86□□□□□ -2.11
SHTN1-206ENST00000497044 CDKN2A-AS1Q9UH64 79 aa1.86□□□□□ -2.11
SHTN1-206ENST00000497044 TMEM170BQ5T4T1 132 aa1.86□□□□□ -2.11
SHTN1-206ENST00000497044 UNQ6190/PRO20217Q6UXQ8 127 aa1.86□□□□□ -2.11
SHTN1-206ENST00000497044 PRAC1Q96KF2 57 aa1.86□□□□□ -2.11
SHTN1-206ENST00000497044 OPRPNQ99935 248 aaPredicted RBP1.86□□□□□ -2.11
SHTN1-206ENST00000497044 IGLV7-43P04211 117 aa1.86□□□□□ -2.11
SHTN1-206ENST00000497044 CHTF8P0CG12 524 aa1.86□□□□□ -2.11
SHTN1-206ENST00000497044 UBE2BP63146 152 aa1.86□□□□□ -2.11
SHTN1-206ENST00000497044 FAM229BQ4G0N7 80 aa1.86□□□□□ -2.11
SHTN1-206ENST00000497044 Q8NDZ9 215 aa1.86□□□□□ -2.11
SHTN1-206ENST00000497044 TOMM7Q9P0U1 55 aa1.86□□□□□ -2.11
SHTN1-206ENST00000497044 FUSP35637 526 aaKnown RBP eCLIP1.85□□□□□ -2.11
SHTN1-206ENST00000497044 NKAPP1Q8N9T2 125 aa1.85□□□□□ -2.11
SHTN1-206ENST00000497044 H0Y9J4 135 aa1.85□□□□□ -2.11
SHTN1-206ENST00000497044 H7BZZ5 65 aa1.85□□□□□ -2.11
SHTN1-206ENST00000497044 MRPL55Q7Z7F7 128 aaKnown RBP1.85□□□□□ -2.11
SHTN1-206ENST00000497044 ZNF706Q9Y5V0 76 aaPredicted RBP1.85□□□□□ -2.11
SHTN1-206ENST00000497044 SRRM2Q9UQ35 2752 aaKnown RBP1.85□□□□□ -2.11
SHTN1-206ENST00000497044 FABP2P12104 132 aa1.85□□□□□ -2.11
SHTN1-206ENST00000497044 ZC2HC1BQ5TFG8 222 aa1.85□□□□□ -2.11
SHTN1-206ENST00000497044 Q6JHZ5 121 aa1.85□□□□□ -2.11
SHTN1-206ENST00000497044 C3orf22Q8N5N4 141 aa1.85□□□□□ -2.11
SHTN1-206ENST00000497044 A0A1W2PNN7 141 aa1.84□□□□□ -2.11
SHTN1-206ENST00000497044 ZNF861PO60384 105 aa1.84□□□□□ -2.11
SHTN1-206ENST00000497044 NDUFC2O95298 119 aa1.84□□□□□ -2.11
SHTN1-206ENST00000497044 IGKV2-30P06310 120 aa1.84□□□□□ -2.11
SHTN1-206ENST00000497044 C1orf137Q5JT78 98 aa1.84□□□□□ -2.11
SHTN1-206ENST00000497044 RNF213Q63HN8 5207 aa1.84□□□□□ -2.11
SHTN1-206ENST00000497044 M0R378 163 aa1.84□□□□□ -2.11
SHTN1-206ENST00000497044 SPINK8P0C7L1 97 aa1.84□□□□□ -2.11
SHTN1-206ENST00000497044 ETDBQ3ZM63 59 aa1.84□□□□□ -2.11
SHTN1-206ENST00000497044 VAMP3Q15836 100 aa1.84□□□□□ -2.12
SHTN1-206ENST00000497044 FAM19A5Q7Z5A7 132 aaPredicted RBP1.84□□□□□ -2.12
SHTN1-206ENST00000497044 PRO1854Q9UHT4 67 aa1.84□□□□□ -2.12
SHTN1-206ENST00000497044 UQCRQO14949 82 aa1.83□□□□□ -2.12
SHTN1-206ENST00000497044 COX7CP15954 63 aa1.83□□□□□ -2.12
SHTN1-206ENST00000497044 LGALS3P17931 250 aaKnown RBP1.83□□□□□ -2.12
SHTN1-206ENST00000497044 KRTAP13-3Q3SY46 172 aa1.83□□□□□ -2.12
SHTN1-206ENST00000497044 PHF5AQ7RTV0 110 aaKnown RBP1.83□□□□□ -2.12
SHTN1-206ENST00000497044 LINC00337Q8N6G1 96 aa1.83□□□□□ -2.12
SHTN1-206ENST00000497044 LINC00846Q9NV44 126 aa1.83□□□□□ -2.12
SHTN1-206ENST00000497044 TEX49A0A1B0GTD5 131 aa1.83□□□□□ -2.12
SHTN1-206ENST00000497044 HAMPP81172 84 aa1.83□□□□□ -2.12
SHTN1-206ENST00000497044 MEIG1Q5JSS6 88 aa1.83□□□□□ -2.12
SHTN1-206ENST00000497044 SND1-IT1Q9HBX3 110 aa1.83□□□□□ -2.12
SHTN1-206ENST00000497044 NDUFA12Q9UI09 145 aa1.83□□□□□ -2.12
SHTN1-206ENST00000497044 LRP1Q07954 4544 aaKnown RBP1.82□□□□□ -2.12
SHTN1-206ENST00000497044 UBE2AP49459 152 aa1.82□□□□□ -2.12
SHTN1-206ENST00000497044 LINC00158P58513 81 aa1.82□□□□□ -2.12
SHTN1-206ENST00000497044 SPAG11AQ6PDA7 123 aa1.82□□□□□ -2.12
SHTN1-206ENST00000497044 J3QQQ9 107 aa1.82□□□□□ -2.12
SHTN1-206ENST00000497044 LINC00643Q86TS7 51 aa1.82□□□□□ -2.12
SHTN1-206ENST00000497044 SLC25A20O43772 301 aa1.81□□□□□ -2.12
SHTN1-206ENST00000497044 SPRR1AP35321 89 aa1.81□□□□□ -2.12
SHTN1-206ENST00000497044 KRTAP13-1Q8IUC0 172 aa1.81□□□□□ -2.12
SHTN1-206ENST00000497044 Q8N377 158 aa1.81□□□□□ -2.12
SHTN1-206ENST00000497044 OCR1Q9BZK8 76 aa1.81□□□□□ -2.12
SHTN1-206ENST00000497044 KCNQ1DNQ9H478 68 aa1.81□□□□□ -2.12
SHTN1-206ENST00000497044 IGLV6-57P01721 117 aa1.81□□□□□ -2.12
SHTN1-206ENST00000497044 TMEM258P61165 79 aa1.81□□□□□ -2.12
SHTN1-206ENST00000497044 XAGE1AQ9HD64 81 aa1.81□□□□□ -2.12
SHTN1-206ENST00000497044 UBR4Q5T4S7 5183 aa1.81□□□□□ -2.12
SHTN1-206ENST00000497044 FAM168BA1KXE4 195 aa1.8□□□□□ -2.12
SHTN1-206ENST00000497044 PFN2P35080 140 aa1.8□□□□□ -2.12
SHTN1-206ENST00000497044 MUSTN1Q8IVN3 82 aa1.8□□□□□ -2.12
SHTN1-206ENST00000497044 DMBT1Q9UGM3 2413 aaPredicted RBP1.8□□□□□ -2.12
SHTN1-206ENST00000497044 ETDCA0A1B0GVM5 59 aa1.8□□□□□ -2.12
SHTN1-206ENST00000497044 PRR4Q16378 134 aa1.8□□□□□ -2.12
SHTN1-206ENST00000497044 Q1T7F1 81 aa1.8□□□□□ -2.12
SHTN1-206ENST00000497044 C5orf47Q569G3 176 aa1.8□□□□□ -2.12
SHTN1-206ENST00000497044 MIR7-3HGQ8N6C7 128 aa1.8□□□□□ -2.12
SHTN1-206ENST00000497044 Q6ZQT0 140 aa1.8□□□□□ -2.12
SHTN1-206ENST00000497044 FAM19A1Q7Z5A9 133 aa1.8□□□□□ -2.12
SHTN1-206ENST00000497044 LINC00308Q8TCZ7 52 aa1.8□□□□□ -2.12
SHTN1-206ENST00000497044 NHP2Q9NX24 153 aaKnown RBP1.8□□□□□ -2.12
SHTN1-206ENST00000497044 IGLV8-61A0A075B6I0 122 aa1.79□□□□□ -2.12
SHTN1-206ENST00000497044 KRTAP1-4P0C5Y4 121 aa1.79□□□□□ -2.12
SHTN1-206ENST00000497044 CYP4F30PQ9H0H9 118 aa1.79□□□□□ -2.12
SHTN1-206ENST00000497044 DHRS4-AS1Q9P1J3 65 aa1.79□□□□□ -2.12
SHTN1-206ENST00000497044 CXCL6P80162 114 aa1.79□□□□□ -2.12
SHTN1-206ENST00000497044 LINC00483Q53H64 154 aa1.79□□□□□ -2.12
SHTN1-206ENST00000497044 S100A7L2Q5SY68 101 aa1.79□□□□□ -2.12
SHTN1-206ENST00000497044 SSBP3-AS1Q7Z2R9 100 aa1.79□□□□□ -2.12
SHTN1-206ENST00000497044 IGLV5-48A0A075B6I7 105 aa1.79□□□□□ -2.12
SHTN1-206ENST00000497044 A0A1B0GW54 56 aa1.79□□□□□ -2.12
SHTN1-206ENST00000497044 ATP5EP2Q5VTU8 51 aa1.79□□□□□ -2.12
SHTN1-206ENST00000497044 TYMSOSQ8TAI1 123 aa1.79□□□□□ -2.12
SHTN1-206ENST00000497044 TRAV23DV6A0A075B6W5 121 aa1.78□□□□□ -2.12
SHTN1-206ENST00000497044 TRAV13-2A0A0B4J235 113 aa1.78□□□□□ -2.12
SHTN1-206ENST00000497044 RPL37AP8A6NKH3 93 aa1.78□□□□□ -2.12
SHTN1-206ENST00000497044 CCKP06307 115 aa1.78□□□□□ -2.12
SHTN1-206ENST00000497044 ATXN8Q156A1 80 aa1.78□□□□□ -2.12
SHTN1-206ENST00000497044 PRR15Q8IV56 129 aa1.78□□□□□ -2.12
SHTN1-206ENST00000497044 ZNF815PA8K554 130 aa1.78□□□□□ -2.12
SHTN1-206ENST00000497044 SPRR4Q96PI1 79 aa1.78□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 158.7 ms